EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000012262 (Gene tree)
Gene ID: -
Gene Symbol: SNAI1
Alias: SLUGH2|SNA|SNAH|SNAIL|SNAIL1
Full Name: snail family transcriptional repressor 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 3414 bases
Position: chrscaffold_131025:18425-21838
Accession: 11128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000010612	zf-C2H2	PF00096.26	3.4e-19	1	3
ENSTBEP00000010612	zf-C2H2	PF00096.26	3.4e-19	2	3
ENSTBEP00000010612	zf-C2H2	PF00096.26	3.4e-19	3	3
ENSTBEP00000010612	zf-met	PF12874.7	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000012254	SNAI1-201	564	-	ENSTBEP00000010612	188 (aa)	-	UPI0000F5E166

Gene Model

Click here to download ENSTBEG00000012262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000012262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000012262	SNAI1	65	41.346	ENSTBEG00000011217	ZFP1	68	40.566
ENSTBEG00000012262	SNAI1	84	42.308	ENSTBEG00000016819	-	68	44.578
ENSTBEG00000012262	SNAI1	59	42.169	ENSTBEG00000009878	ZNF829	69	42.169
ENSTBEG00000012262	SNAI1	56	41.176	ENSTBEG00000002398	ZNF234	81	41.176
ENSTBEG00000012262	SNAI1	71	40.566	ENSTBEG00000015677	ZFP62	83	40.566
ENSTBEG00000012262	SNAI1	57	43.243	ENSTBEG00000012847	ZNF2	62	42.857
ENSTBEG00000012262	SNAI1	70	39.474	ENSTBEG00000001263	-	51	39.474
ENSTBEG00000012262	SNAI1	63	40.594	ENSTBEG00000017192	ZNF771	74	40.594
ENSTBEG00000012262	SNAI1	64	44.928	ENSTBEG00000003410	-	75	44.928
ENSTBEG00000012262	SNAI1	72	35.714	ENSTBEG00000016262	-	90	35.652
ENSTBEG00000012262	SNAI1	57	40.741	ENSTBEG00000012287	-	98	40.741
ENSTBEG00000012262	SNAI1	70	41.176	ENSTBEG00000012075	GTF3A	50	39.785
ENSTBEG00000012262	SNAI1	59	42.453	ENSTBEG00000001345	ZNF235	58	42.453
ENSTBEG00000012262	SNAI1	98	36.283	ENSTBEG00000014014	ZBTB48	51	35.897
ENSTBEG00000012262	SNAI1	66	33.582	ENSTBEG00000001576	-	76	33.582
ENSTBEG00000012262	SNAI1	63	43.038	ENSTBEG00000004851	ZNF768	52	43.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000012262	SNAI1	99	84.456	ENSG00000124216	SNAI1	73	86.010	Homo_sapiens
ENSTBEG00000012262	SNAI1	99	84.974	ENSAMEG00000013478	SNAI1	73	88.083	Ailuropoda_melanoleuca
ENSTBEG00000012262	SNAI1	81	63.125	ENSACIG00000009443	-	54	66.667	Amphilophus_citrinellus
ENSTBEG00000012262	SNAI1	94	63.842	ENSACIG00000018641	snai2	50	74.453	Amphilophus_citrinellus
ENSTBEG00000012262	SNAI1	74	74.286	ENSAOCG00000017968	snai2	50	74.453	Amphiprion_ocellaris
ENSTBEG00000012262	SNAI1	74	74.286	ENSAPEG00000002983	snai2	50	74.453	Amphiprion_percula
ENSTBEG00000012262	SNAI1	94	63.277	ENSATEG00000006892	snai2	50	74.453	Anabas_testudineus
ENSTBEG00000012262	SNAI1	90	71.765	ENSAPLG00000014633	-	72	71.765	Anas_platyrhynchos
ENSTBEG00000012262	SNAI1	73	76.087	ENSACAG00000015607	SNAI1	52	76.087	Anolis_carolinensis
ENSTBEG00000012262	SNAI1	97	86.486	ENSANAG00000028666	SNAI1	70	88.649	Aotus_nancymaae
ENSTBEG00000012262	SNAI1	94	63.842	ENSACLG00000018551	snai2	54	74.453	Astatotilapia_calliptera
ENSTBEG00000012262	SNAI1	74	74.820	ENSAMXG00000038235	snai2	51	75.182	Astyanax_mexicanus
ENSTBEG00000012262	SNAI1	97	87.027	ENSBTAG00000014554	SNAI1	73	87.047	Bos_taurus
ENSTBEG00000012262	SNAI1	57	62.037	WBGene00019299	snai-1	55	62.037	Caenorhabditis_elegans
ENSTBEG00000012262	SNAI1	97	87.568	ENSCJAG00000000518	SNAI1	70	89.730	Callithrix_jacchus
ENSTBEG00000012262	SNAI1	97	88.108	ENSCAFG00000011499	SNAI1	78	90.270	Canis_familiaris
ENSTBEG00000012262	SNAI1	97	88.108	ENSCAFG00020017479	SNAI1	70	90.270	Canis_lupus_dingo
ENSTBEG00000012262	SNAI1	97	87.027	ENSCHIG00000014308	SNAI1	73	87.047	Capra_hircus
ENSTBEG00000012262	SNAI1	99	82.383	ENSTSYG00000010834	SNAI1	73	84.456	Carlito_syrichta
ENSTBEG00000012262	SNAI1	99	87.047	ENSCAPG00000014002	SNAI1	75	86.528	Cavia_aperea
ENSTBEG00000012262	SNAI1	99	87.047	ENSCPOG00000026663	SNAI1	73	86.528	Cavia_porcellus
ENSTBEG00000012262	SNAI1	99	84.456	ENSCCAG00000029550	SNAI1	73	86.528	Cebus_capucinus
ENSTBEG00000012262	SNAI1	99	84.974	ENSCATG00000041452	SNAI1	73	87.047	Cercocebus_atys
ENSTBEG00000012262	SNAI1	97	87.568	ENSCLAG00000012285	SNAI1	70	88.108	Chinchilla_lanigera
ENSTBEG00000012262	SNAI1	99	84.974	ENSCSAG00000015065	SNAI1	73	87.047	Chlorocebus_sabaeus
ENSTBEG00000012262	SNAI1	94	65.537	ENSCHOG00000007046	-	50	77.941	Choloepus_hoffmanni
ENSTBEG00000012262	SNAI1	99	84.456	ENSCANG00000036400	SNAI1	73	86.528	Colobus_angolensis_palliatus
ENSTBEG00000012262	SNAI1	99	81.347	ENSCGRG00001007749	Snai1	73	83.938	Cricetulus_griseus_chok1gshd
ENSTBEG00000012262	SNAI1	99	81.347	ENSCGRG00000009080	Snai1	73	83.938	Cricetulus_griseus_crigri
ENSTBEG00000012262	SNAI1	74	74.820	ENSCSEG00000010311	snai2	50	75.182	Cynoglossus_semilaevis
ENSTBEG00000012262	SNAI1	99	86.010	ENSDNOG00000023834	-	73	87.047	Dasypus_novemcinctus
ENSTBEG00000012262	SNAI1	99	70.466	ENSDNOG00000024891	-	73	70.466	Dasypus_novemcinctus
ENSTBEG00000012262	SNAI1	99	81.122	ENSDORG00000025372	Snai1	82	83.163	Dipodomys_ordii
ENSTBEG00000012262	SNAI1	99	84.021	ENSECAG00000009787	SNAI1	73	86.082	Equus_caballus
ENSTBEG00000012262	SNAI1	86	63.804	ENSELUG00000002056	SNAI1	50	74.219	Esox_lucius
ENSTBEG00000012262	SNAI1	99	84.456	ENSFCAG00000010558	SNAI1	73	86.528	Felis_catus
ENSTBEG00000012262	SNAI1	97	88.649	ENSFDAG00000005851	SNAI1	70	89.189	Fukomys_damarensis
ENSTBEG00000012262	SNAI1	94	62.500	ENSFHEG00000012561	snai2	50	74.453	Fundulus_heteroclitus
ENSTBEG00000012262	SNAI1	94	62.712	ENSGMOG00000002669	snai2	50	74.638	Gadus_morhua
ENSTBEG00000012262	SNAI1	89	72.619	ENSGALG00000008018	SNAI1	66	71.429	Gallus_gallus
ENSTBEG00000012262	SNAI1	94	65.537	ENSGALG00000030902	-	50	77.941	Gallus_gallus
ENSTBEG00000012262	SNAI1	94	61.932	ENSGAFG00000021427	snai2	50	74.453	Gambusia_affinis
ENSTBEG00000012262	SNAI1	74	73.571	ENSGACG00000017935	snai2	50	73.913	Gasterosteus_aculeatus
ENSTBEG00000012262	SNAI1	94	71.348	ENSGAGG00000022705	SNAI1	69	71.348	Gopherus_agassizii
ENSTBEG00000012262	SNAI1	99	84.456	ENSGGOG00000024422	SNAI1	73	86.528	Gorilla_gorilla
ENSTBEG00000012262	SNAI1	94	63.842	ENSHBUG00000007764	snai2	54	74.453	Haplochromis_burtoni
ENSTBEG00000012262	SNAI1	99	86.528	ENSHGLG00000005310	SNAI1	73	87.047	Heterocephalus_glaber_female
ENSTBEG00000012262	SNAI1	99	86.528	ENSHGLG00100018390	SNAI1	73	87.047	Heterocephalus_glaber_male
ENSTBEG00000012262	SNAI1	99	84.974	ENSSTOG00000005866	SNAI1	73	87.047	Ictidomys_tridecemlineatus
ENSTBEG00000012262	SNAI1	99	86.911	ENSJJAG00000017317	Snai1	73	86.911	Jaculus_jaculus
ENSTBEG00000012262	SNAI1	94	63.277	ENSKMAG00000005164	snai2	50	74.453	Kryptolebias_marmoratus
ENSTBEG00000012262	SNAI1	94	63.068	ENSLBEG00000000972	snai2	53	74.453	Labrus_bergylta
ENSTBEG00000012262	SNAI1	93	69.492	ENSLACG00000017707	SNAI1	68	68.508	Latimeria_chalumnae
ENSTBEG00000012262	SNAI1	99	84.896	ENSLAFG00000030265	SNAI1	73	85.938	Loxodonta_africana
ENSTBEG00000012262	SNAI1	99	84.974	ENSMFAG00000000994	SNAI1	73	87.047	Macaca_fascicularis
ENSTBEG00000012262	SNAI1	99	84.456	ENSMNEG00000036933	SNAI1	73	86.528	Macaca_nemestrina
ENSTBEG00000012262	SNAI1	99	84.974	ENSMLEG00000039236	SNAI1	73	87.047	Mandrillus_leucophaeus
ENSTBEG00000012262	SNAI1	94	63.842	ENSMAMG00000015632	snai2	50	74.453	Mastacembelus_armatus
ENSTBEG00000012262	SNAI1	94	63.842	ENSMZEG00005025060	snai2	54	74.453	Maylandia_zebra
ENSTBEG00000012262	SNAI1	89	72.619	ENSMGAG00000009447	SNAI1	66	71.429	Meleagris_gallopavo
ENSTBEG00000012262	SNAI1	99	83.420	ENSMAUG00000021592	Snai1	73	85.492	Mesocricetus_auratus
ENSTBEG00000012262	SNAI1	99	83.420	ENSMICG00000042228	SNAI1	73	85.492	Microcebus_murinus
ENSTBEG00000012262	SNAI1	99	83.420	ENSMOCG00000007847	Snai1	73	85.492	Microtus_ochrogaster
ENSTBEG00000012262	SNAI1	94	63.636	ENSMMOG00000016695	snai2	55	75.556	Mola_mola
ENSTBEG00000012262	SNAI1	94	70.000	ENSMODG00000016309	SNAI1	68	70.000	Monodelphis_domestica
ENSTBEG00000012262	SNAI1	94	63.842	ENSMALG00000021318	snai2	54	74.453	Monopterus_albus
ENSTBEG00000012262	SNAI1	99	83.420	MGP_CAROLIEiJ_G0024709	Snai1	73	85.492	Mus_caroli
ENSTBEG00000012262	SNAI1	99	82.902	ENSMUSG00000042821	Snai1	73	84.974	Mus_musculus
ENSTBEG00000012262	SNAI1	99	83.420	MGP_PahariEiJ_G0026151	Snai1	73	85.492	Mus_pahari
ENSTBEG00000012262	SNAI1	99	83.420	MGP_SPRETEiJ_G0025629	Snai1	73	85.492	Mus_spretus
ENSTBEG00000012262	SNAI1	99	85.492	ENSMPUG00000017558	SNAI1	73	88.601	Mustela_putorius_furo
ENSTBEG00000012262	SNAI1	99	78.534	ENSMLUG00000011649	-	72	80.105	Myotis_lucifugus
ENSTBEG00000012262	SNAI1	99	84.974	ENSMLUG00000015053	-	73	87.047	Myotis_lucifugus
ENSTBEG00000012262	SNAI1	99	84.456	ENSNGAG00000017185	Snai1	73	86.528	Nannospalax_galili
ENSTBEG00000012262	SNAI1	94	63.842	ENSNBRG00000011785	snai2	54	74.453	Neolamprologus_brichardi
ENSTBEG00000012262	SNAI1	99	84.974	ENSNLEG00000006985	SNAI1	73	87.047	Nomascus_leucogenys
ENSTBEG00000012262	SNAI1	94	90.556	ENSODEG00000007856	SNAI1	68	91.111	Octodon_degus
ENSTBEG00000012262	SNAI1	94	63.842	ENSONIG00000009542	snai2	50	74.453	Oreochromis_niloticus
ENSTBEG00000012262	SNAI1	73	78.832	ENSOANG00000008681	SNAI1	69	69.780	Ornithorhynchus_anatinus
ENSTBEG00000012262	SNAI1	99	79.793	ENSOCUG00000005422	SNAI1	79	81.865	Oryctolagus_cuniculus
ENSTBEG00000012262	SNAI1	74	74.286	ENSORLG00000017475	snai2	50	74.453	Oryzias_latipes
ENSTBEG00000012262	SNAI1	94	63.842	ENSORLG00020008787	snai2	53	74.101	Oryzias_latipes_hni
ENSTBEG00000012262	SNAI1	74	74.286	ENSORLG00015008609	snai2	50	74.453	Oryzias_latipes_hsok
ENSTBEG00000012262	SNAI1	94	63.842	ENSOMEG00000006591	snai2	52	74.453	Oryzias_melastigma
ENSTBEG00000012262	SNAI1	99	84.456	ENSOGAG00000030111	SNAI1	73	86.528	Otolemur_garnettii
ENSTBEG00000012262	SNAI1	97	87.500	ENSOARG00000013174	SNAI1	55	85.417	Ovis_aries
ENSTBEG00000012262	SNAI1	99	84.456	ENSPPAG00000041096	SNAI1	73	86.528	Pan_paniscus
ENSTBEG00000012262	SNAI1	99	84.456	ENSPPRG00000013272	SNAI1	73	86.528	Panthera_pardus
ENSTBEG00000012262	SNAI1	99	84.456	ENSPTRG00000050285	SNAI1	73	86.528	Pan_troglodytes
ENSTBEG00000012262	SNAI1	99	84.974	ENSPANG00000007536	SNAI1	73	87.047	Papio_anubis
ENSTBEG00000012262	SNAI1	94	70.787	ENSPSIG00000003607	SNAI1	67	70.787	Pelodiscus_sinensis
ENSTBEG00000012262	SNAI1	99	82.902	ENSPEMG00000023213	Snai1	73	84.974	Peromyscus_maniculatus_bairdii
ENSTBEG00000012262	SNAI1	94	68.889	ENSPCIG00000023282	SNAI1	68	68.889	Phascolarctos_cinereus
ENSTBEG00000012262	SNAI1	94	61.932	ENSPFOG00000014336	snai2	50	74.453	Poecilia_formosa
ENSTBEG00000012262	SNAI1	94	61.932	ENSPLAG00000009941	snai2	50	74.453	Poecilia_latipinna
ENSTBEG00000012262	SNAI1	94	61.932	ENSPMEG00000024022	snai2	50	74.453	Poecilia_mexicana
ENSTBEG00000012262	SNAI1	99	84.456	ENSPPYG00000011122	SNAI1	73	86.528	Pongo_abelii
ENSTBEG00000012262	SNAI1	99	85.938	ENSPCAG00000011934	SNAI1	81	87.500	Procavia_capensis
ENSTBEG00000012262	SNAI1	99	83.938	ENSPCOG00000020538	SNAI1	73	86.010	Propithecus_coquereli
ENSTBEG00000012262	SNAI1	97	85.561	ENSPVAG00000004119	SNAI1	70	87.701	Pteropus_vampyrus
ENSTBEG00000012262	SNAI1	94	63.842	ENSPNYG00000015217	snai2	54	74.453	Pundamilia_nyererei
ENSTBEG00000012262	SNAI1	74	74.820	ENSPNAG00000015896	snai2	51	75.182	Pygocentrus_nattereri
ENSTBEG00000012262	SNAI1	99	83.420	ENSRNOG00000009594	Snai1	76	85.492	Rattus_norvegicus
ENSTBEG00000012262	SNAI1	99	83.938	ENSRBIG00000026992	SNAI1	73	86.010	Rhinopithecus_bieti
ENSTBEG00000012262	SNAI1	99	83.938	ENSRROG00000043753	SNAI1	73	86.010	Rhinopithecus_roxellana
ENSTBEG00000012262	SNAI1	97	87.568	ENSSBOG00000034760	SNAI1	73	86.082	Saimiri_boliviensis_boliviensis
ENSTBEG00000012262	SNAI1	94	69.444	ENSSHAG00000011015	SNAI1	68	69.444	Sarcophilus_harrisii
ENSTBEG00000012262	SNAI1	88	61.047	ENSSMAG00000008834	-	52	66.667	Scophthalmus_maximus
ENSTBEG00000012262	SNAI1	94	63.842	ENSSMAG00000019364	snai2	50	74.453	Scophthalmus_maximus
ENSTBEG00000012262	SNAI1	74	74.286	ENSSDUG00000018060	snai2	50	74.453	Seriola_dumerili
ENSTBEG00000012262	SNAI1	88	67.470	ENSSLDG00000012852	snai2	54	74.453	Seriola_lalandi_dorsalis
ENSTBEG00000012262	SNAI1	94	66.851	ENSSPUG00000018057	SNAI1	51	77.372	Sphenodon_punctatus
ENSTBEG00000012262	SNAI1	74	74.286	ENSSPAG00000022061	snai2	50	74.453	Stegastes_partitus
ENSTBEG00000012262	SNAI1	99	86.528	ENSSSCG00000032613	SNAI1	78	88.601	Sus_scrofa
ENSTBEG00000012262	SNAI1	73	79.710	ENSTGUG00000008724	SNAI1	67	70.857	Taeniopygia_guttata
ENSTBEG00000012262	SNAI1	94	63.842	ENSTRUG00000025588	snai2	50	74.453	Takifugu_rubripes
ENSTBEG00000012262	SNAI1	94	63.842	ENSTNIG00000008504	snai2	50	74.453	Tetraodon_nigroviridis
ENSTBEG00000012262	SNAI1	99	86.010	ENSTTRG00000002029	SNAI1	73	88.083	Tursiops_truncatus
ENSTBEG00000012262	SNAI1	76	93.706	ENSUAMG00000026603	SNAI1	73	82.105	Ursus_americanus
ENSTBEG00000012262	SNAI1	99	85.492	ENSUMAG00000024458	SNAI1	78	87.565	Ursus_maritimus
ENSTBEG00000012262	SNAI1	99	85.492	ENSVVUG00000022410	SNAI1	73	87.565	Vulpes_vulpes
ENSTBEG00000012262	SNAI1	90	69.412	ENSXETG00000027366	snai1	50	77.536	Xenopus_tropicalis
ENSTBEG00000012262	SNAI1	94	61.932	ENSXCOG00000015084	snai2	50	74.453	Xiphophorus_couchianus
ENSTBEG00000012262	SNAI1	94	61.932	ENSXMAG00000019030	snai2	50	74.453	Xiphophorus_maculatus
ENSTBEG00000012262	SNAI1	67	74.419	ENSXMAG00000015281	-	50	74.419	Xiphophorus_maculatus