EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000012287 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 950 bases
Position: chrscaffold_799:5-954
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	1	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	2	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	3	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	4	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	5	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	6	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	7	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	8	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	9	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	10	11
ENSTBEP00000010626	zf-C2H2	PF00096.26	3.5e-63	11	11
ENSTBEP00000010626	zf-met	PF12874.7	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000012270	-	948	-	ENSTBEP00000010626	316 (aa)	-	UPI0000F5D3A0

Gene Model

Click here to download ENSTBEG00000012287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000012287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000012287	-	96	38.843	ENSTBEG00000012075	GTF3A	60	38.843
ENSTBEG00000012287	-	99	41.121	ENSTBEG00000014726	ZNF236	55	39.759
ENSTBEG00000012287	-	97	50.000	ENSTBEG00000014459	GFI1B	52	50.000
ENSTBEG00000012287	-	99	57.466	ENSTBEG00000012847	ZNF2	63	57.466
ENSTBEG00000012287	-	98	40.741	ENSTBEG00000012262	SNAI1	57	40.741
ENSTBEG00000012287	-	99	51.282	ENSTBEG00000017192	ZNF771	83	51.282
ENSTBEG00000012287	-	99	57.071	ENSTBEG00000016819	-	71	57.071
ENSTBEG00000012287	-	98	33.333	ENSTBEG00000006416	ZNF784	72	34.052
ENSTBEG00000012287	-	99	57.051	ENSTBEG00000002398	ZNF234	90	58.654
ENSTBEG00000012287	-	99	55.272	ENSTBEG00000014400	ZNF112	76	55.272
ENSTBEG00000012287	-	98	47.458	ENSTBEG00000001576	-	67	47.458
ENSTBEG00000012287	-	99	53.668	ENSTBEG00000011217	ZFP1	87	53.668
ENSTBEG00000012287	-	99	57.092	ENSTBEG00000001263	-	55	57.092
ENSTBEG00000012287	-	100	62.963	ENSTBEG00000003410	-	89	62.963
ENSTBEG00000012287	-	99	64.286	ENSTBEG00000009878	ZNF829	69	64.286
ENSTBEG00000012287	-	98	43.860	ENSTBEG00000015386	PRDM5	62	42.105
ENSTBEG00000012287	-	99	51.744	ENSTBEG00000016262	-	100	45.161
ENSTBEG00000012287	-	99	53.086	ENSTBEG00000011571	-	62	46.512
ENSTBEG00000012287	-	99	54.516	ENSTBEG00000015677	ZFP62	93	54.516
ENSTBEG00000012287	-	99	50.391	ENSTBEG00000004851	ZNF768	53	50.588
ENSTBEG00000012287	-	100	56.090	ENSTBEG00000001345	ZNF235	71	56.090

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000012287	-	100	48.276	ENSATEG00000010859	-	89	46.429	Anabas_testudineus
ENSTBEG00000012287	-	99	56.923	ENSAMXG00000013274	-	95	56.923	Astyanax_mexicanus
ENSTBEG00000012287	-	99	56.106	ENSAMXG00000039977	-	95	56.106	Astyanax_mexicanus
ENSTBEG00000012287	-	99	56.122	ENSAMXG00000042633	-	90	56.122	Astyanax_mexicanus
ENSTBEG00000012287	-	99	58.042	ENSAMXG00000039432	-	95	58.042	Astyanax_mexicanus
ENSTBEG00000012287	-	99	55.670	ENSAMXG00000039700	-	94	55.670	Astyanax_mexicanus
ENSTBEG00000012287	-	100	54.808	ENSAMXG00000029960	-	95	54.808	Astyanax_mexicanus
ENSTBEG00000012287	-	99	58.451	ENSAMXG00000042593	-	90	58.451	Astyanax_mexicanus
ENSTBEG00000012287	-	99	57.343	ENSAMXG00000031794	-	96	57.343	Astyanax_mexicanus
ENSTBEG00000012287	-	99	56.589	ENSCPBG00000009849	-	84	56.589	Chrysemys_picta_bellii
ENSTBEG00000012287	-	99	51.656	ENSELUG00000009575	-	99	52.249	Esox_lucius
ENSTBEG00000012287	-	99	55.311	ENSIPUG00000015121	-	59	55.311	Ictalurus_punctatus
ENSTBEG00000012287	-	99	58.974	ENSKMAG00000000543	-	99	46.624	Kryptolebias_marmoratus
ENSTBEG00000012287	-	99	41.967	ENSMAMG00000016519	-	86	43.571	Mastacembelus_armatus
ENSTBEG00000012287	-	100	49.112	ENSMZEG00005020574	-	84	49.112	Maylandia_zebra
ENSTBEG00000012287	-	99	40.256	ENSONIG00000007088	-	100	40.256	Oreochromis_niloticus
ENSTBEG00000012287	-	99	52.613	ENSPSIG00000000075	-	74	52.613	Pelodiscus_sinensis
ENSTBEG00000012287	-	99	58.846	ENSPNAG00000012215	-	85	58.846	Pygocentrus_nattereri
ENSTBEG00000012287	-	99	57.143	ENSPNAG00000008480	-	95	57.143	Pygocentrus_nattereri
ENSTBEG00000012287	-	99	41.346	ENSSMAG00000007396	-	72	41.346	Scophthalmus_maximus