EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000012511 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 1038 bases
Position: chrGeneScaffold_5281:390202-391239
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000010824	RRM_1	PF00076.22	2.3e-31	1	2
ENSTBEP00000010824	RRM_1	PF00076.22	2.3e-31	2	2
ENSTBEP00000010824	HnRNPA1	PF11627.8	6.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000012495	-	858	-	ENSTBEP00000010824	286 (aa)	-	UPI0000F6076E

Gene Model

Click here to download ENSTBEG00000012511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000012511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000012511	-	100	58.621	ENSTBEG00000007607	-	61	63.265
ENSTBEG00000012511	-	59	40.588	ENSTBEG00000002327	HNRNPD	59	40.351
ENSTBEG00000012511	-	77	76.793	ENSTBEG00000016272	-	75	87.179
ENSTBEG00000012511	-	63	64.000	ENSTBEG00000017108	-	69	64.000
ENSTBEG00000012511	-	99	63.636	ENSTBEG00000002499	-	82	66.986
ENSTBEG00000012511	-	61	68.000	ENSTBEG00000003219	-	70	68.000
ENSTBEG00000012511	-	62	30.114	ENSTBEG00000000263	TARDBP	54	30.114
ENSTBEG00000012511	-	64	33.333	ENSTBEG00000001241	MSI2	51	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000012511	-	98	68.929	ENSAMEG00000002186	-	100	68.571	Ailuropoda_melanoleuca
ENSTBEG00000012511	-	98	84.342	ENSCAFG00000006327	-	89	84.615	Canis_familiaris
ENSTBEG00000012511	-	99	80.282	ENSCAFG00000017180	-	89	80.282	Canis_familiaris
ENSTBEG00000012511	-	97	82.734	ENSCHIG00000020351	-	89	83.333	Capra_hircus
ENSTBEG00000012511	-	100	68.868	ENSDNOG00000030945	-	87	68.868	Dasypus_novemcinctus
ENSTBEG00000012511	-	99	72.281	ENSDNOG00000048335	-	90	72.281	Dasypus_novemcinctus
ENSTBEG00000012511	-	100	90.559	ENSDORG00000027821	-	89	90.559	Dipodomys_ordii
ENSTBEG00000012511	-	75	60.465	ENSETEG00000004129	-	71	64.103	Echinops_telfairi
ENSTBEG00000012511	-	75	77.778	ENSETEG00000010244	-	83	77.778	Echinops_telfairi
ENSTBEG00000012511	-	100	90.210	ENSFDAG00000021342	-	89	90.210	Fukomys_damarensis
ENSTBEG00000012511	-	100	90.210	ENSHGLG00000003139	HNRNPA1	89	90.210	Heterocephalus_glaber_female
ENSTBEG00000012511	-	100	90.210	ENSHGLG00100015974	HNRNPA1	89	90.210	Heterocephalus_glaber_male
ENSTBEG00000012511	-	100	70.486	ENSHGLG00100017719	-	92	68.750	Heterocephalus_glaber_male
ENSTBEG00000012511	-	84	71.369	ENSSTOG00000034519	-	75	71.369	Ictidomys_tridecemlineatus
ENSTBEG00000012511	-	87	62.400	ENSMNEG00000038539	-	84	56.333	Macaca_nemestrina
ENSTBEG00000012511	-	65	77.500	ENSMPUG00000016249	-	59	77.500	Mustela_putorius_furo
ENSTBEG00000012511	-	97	64.918	ENSMPUG00000003127	-	91	59.016	Mustela_putorius_furo
ENSTBEG00000012511	-	87	70.161	ENSMPUG00000008269	-	71	74.074	Mustela_putorius_furo
ENSTBEG00000012511	-	98	67.742	ENSPTIG00000013949	-	90	67.742	Panthera_tigris_altaica
ENSTBEG00000012511	-	67	88.591	ENSPANG00000017095	-	87	84.071	Papio_anubis