EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000012523 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 59328 bases
Position: chrGeneScaffold_3665:41909-101236
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000010840	AD	PF09793.9	1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000012514	-	588	-	ENSTBEP00000010840	195 (aa)	-	UPI0000F5E4DF

Gene Model

Click here to download ENSTBEG00000012523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000012523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000012523	-	100	96.923	ENSTBEG00000012392	-	100	96.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000012523	-	100	99.487	ENSG00000161654	LSM12	100	99.487	Homo_sapiens
ENSTBEG00000012523	-	100	85.714	ENSAPOG00000007907	lsm12b	100	85.714	Acanthochromis_polyacanthus
ENSTBEG00000012523	-	100	97.475	ENSAMEG00000018321	LSM12	100	97.475	Ailuropoda_melanoleuca
ENSTBEG00000012523	-	100	83.673	ENSACIG00000008538	lsm12b	100	83.673	Amphilophus_citrinellus
ENSTBEG00000012523	-	100	85.204	ENSAOCG00000021847	lsm12b	88	85.204	Amphiprion_ocellaris
ENSTBEG00000012523	-	100	85.204	ENSAPEG00000002252	lsm12b	100	85.204	Amphiprion_percula
ENSTBEG00000012523	-	100	84.694	ENSATEG00000005705	lsm12b	100	84.694	Anabas_testudineus
ENSTBEG00000012523	-	99	93.264	ENSACAG00000004618	LSM12	99	93.264	Anolis_carolinensis
ENSTBEG00000012523	-	100	99.487	ENSANAG00000029011	LSM12	100	99.487	Aotus_nancymaae
ENSTBEG00000012523	-	100	84.184	ENSACLG00000026332	lsm12b	100	84.184	Astatotilapia_calliptera
ENSTBEG00000012523	-	100	78.571	ENSAMXG00000036117	lsm12a	91	78.571	Astyanax_mexicanus
ENSTBEG00000012523	-	100	84.184	ENSAMXG00000032952	lsm12b	100	84.184	Astyanax_mexicanus
ENSTBEG00000012523	-	100	99.487	ENSBTAG00000016252	LSM12	100	99.487	Bos_taurus
ENSTBEG00000012523	-	100	99.487	ENSCJAG00000048480	LSM12	100	99.487	Callithrix_jacchus
ENSTBEG00000012523	-	100	99.487	ENSCAFG00000014379	LSM12	92	99.487	Canis_familiaris
ENSTBEG00000012523	-	100	99.487	ENSCAFG00020012173	LSM12	100	99.487	Canis_lupus_dingo
ENSTBEG00000012523	-	100	99.487	ENSCHIG00000018175	LSM12	100	99.487	Capra_hircus
ENSTBEG00000012523	-	100	99.487	ENSTSYG00000036361	LSM12	100	99.487	Carlito_syrichta
ENSTBEG00000012523	-	83	93.827	ENSCAPG00000009647	LSM12	89	93.827	Cavia_aperea
ENSTBEG00000012523	-	100	97.436	ENSCPOG00000012860	LSM12	100	97.436	Cavia_porcellus
ENSTBEG00000012523	-	100	99.487	ENSCCAG00000032905	LSM12	100	99.487	Cebus_capucinus
ENSTBEG00000012523	-	100	99.487	ENSCATG00000030577	-	100	99.487	Cercocebus_atys
ENSTBEG00000012523	-	100	98.462	ENSCLAG00000015759	LSM12	100	98.462	Chinchilla_lanigera
ENSTBEG00000012523	-	100	98.974	ENSCSAG00000003486	LSM12	100	98.974	Chlorocebus_sabaeus
ENSTBEG00000012523	-	56	98.165	ENSCHOG00000001198	LSM12	100	98.165	Choloepus_hoffmanni
ENSTBEG00000012523	-	99	92.746	ENSCPBG00000027105	LSM12	99	92.746	Chrysemys_picta_bellii
ENSTBEG00000012523	-	100	99.487	ENSCANG00000043328	LSM12	100	99.487	Colobus_angolensis_palliatus
ENSTBEG00000012523	-	100	99.487	ENSCGRG00001002094	Lsm12	100	99.487	Cricetulus_griseus_chok1gshd
ENSTBEG00000012523	-	86	92.262	ENSCGRG00000004316	Lsm12	95	92.262	Cricetulus_griseus_crigri
ENSTBEG00000012523	-	100	84.184	ENSCSEG00000008434	lsm12b	100	84.184	Cynoglossus_semilaevis
ENSTBEG00000012523	-	100	84.184	ENSCVAG00000008755	lsm12b	100	84.184	Cyprinodon_variegatus
ENSTBEG00000012523	-	100	84.694	ENSDARG00000109510	lsm12b	100	84.694	Danio_rerio
ENSTBEG00000012523	-	100	76.531	ENSDARG00000028848	lsm12a	100	76.531	Danio_rerio
ENSTBEG00000012523	-	100	98.974	ENSDNOG00000002418	LSM12	91	98.974	Dasypus_novemcinctus
ENSTBEG00000012523	-	100	99.487	ENSDORG00000016381	Lsm12	100	99.487	Dipodomys_ordii
ENSTBEG00000012523	-	83	33.133	FBgn0030364	Lsm12	76	32.934	Drosophila_melanogaster
ENSTBEG00000012523	-	73	32.051	FBgn0036057	CG14164	82	32.051	Drosophila_melanogaster
ENSTBEG00000012523	-	100	98.974	ENSETEG00000008374	LSM12	100	98.974	Echinops_telfairi
ENSTBEG00000012523	-	90	87.429	ENSETEG00000011012	-	100	87.429	Echinops_telfairi
ENSTBEG00000012523	-	84	63.415	ENSEBUG00000016299	lsm12a	92	63.415	Eptatretus_burgeri
ENSTBEG00000012523	-	100	99.487	ENSEASG00005010155	LSM12	100	99.487	Equus_asinus_asinus
ENSTBEG00000012523	-	100	99.487	ENSECAG00000009071	LSM12	100	99.487	Equus_caballus
ENSTBEG00000012523	-	78	98.039	ENSEEUG00000002419	-	100	98.039	Erinaceus_europaeus
ENSTBEG00000012523	-	100	83.673	ENSELUG00000015538	lsm12b	100	79.082	Esox_lucius
ENSTBEG00000012523	-	100	82.143	ENSELUG00000000256	-	100	82.143	Esox_lucius
ENSTBEG00000012523	-	100	99.487	ENSFCAG00000037021	LSM12	100	99.487	Felis_catus
ENSTBEG00000012523	-	76	98.649	ENSFDAG00000008954	LSM12	87	98.649	Fukomys_damarensis
ENSTBEG00000012523	-	100	83.163	ENSFHEG00000019913	lsm12b	100	83.163	Fundulus_heteroclitus
ENSTBEG00000012523	-	81	83.544	ENSGMOG00000015449	lsm12b	100	83.544	Gadus_morhua
ENSTBEG00000012523	-	78	93.464	ENSGALG00000039803	LSM12	100	93.464	Gallus_gallus
ENSTBEG00000012523	-	100	83.673	ENSGAFG00000011829	lsm12b	100	83.673	Gambusia_affinis
ENSTBEG00000012523	-	81	84.177	ENSGACG00000003428	lsm12b	100	84.177	Gasterosteus_aculeatus
ENSTBEG00000012523	-	99	93.782	ENSGAGG00000021965	LSM12	99	93.782	Gopherus_agassizii
ENSTBEG00000012523	-	100	99.487	ENSGGOG00000010589	-	100	99.487	Gorilla_gorilla
ENSTBEG00000012523	-	85	85.629	ENSHBUG00000007667	lsm12b	74	85.629	Haplochromis_burtoni
ENSTBEG00000012523	-	100	99.487	ENSHGLG00000011411	LSM12	100	99.487	Heterocephalus_glaber_female
ENSTBEG00000012523	-	91	86.740	ENSHGLG00100000241	LSM12	96	86.740	Heterocephalus_glaber_male
ENSTBEG00000012523	-	100	83.673	ENSHCOG00000002094	lsm12b	100	83.673	Hippocampus_comes
ENSTBEG00000012523	-	99	75.258	ENSIPUG00000008936	lsm12a	99	75.258	Ictalurus_punctatus
ENSTBEG00000012523	-	100	84.694	ENSIPUG00000014800	lsm12	100	84.694	Ictalurus_punctatus
ENSTBEG00000012523	-	100	99.487	ENSSTOG00000007403	LSM12	100	99.487	Ictidomys_tridecemlineatus
ENSTBEG00000012523	-	97	87.895	ENSJJAG00000011793	-	100	87.895	Jaculus_jaculus
ENSTBEG00000012523	-	100	98.974	ENSJJAG00000004364	-	100	98.974	Jaculus_jaculus
ENSTBEG00000012523	-	81	84.906	ENSJJAG00000014652	-	95	84.906	Jaculus_jaculus
ENSTBEG00000012523	-	86	86.310	ENSKMAG00000007704	lsm12b	57	86.310	Kryptolebias_marmoratus
ENSTBEG00000012523	-	100	85.204	ENSLBEG00000027999	lsm12b	100	85.204	Labrus_bergylta
ENSTBEG00000012523	-	99	89.637	ENSLACG00000015981	LSM12	99	89.637	Latimeria_chalumnae
ENSTBEG00000012523	-	100	83.163	ENSLOCG00000013079	lsm12b	99	83.163	Lepisosteus_oculatus
ENSTBEG00000012523	-	100	99.487	ENSLAFG00000005202	LSM12	100	99.487	Loxodonta_africana
ENSTBEG00000012523	-	100	99.487	ENSMFAG00000031376	LSM12	100	99.487	Macaca_fascicularis
ENSTBEG00000012523	-	65	85.057	ENSMMUG00000038408	-	100	85.057	Macaca_mulatta
ENSTBEG00000012523	-	65	85.057	ENSMMUG00000042106	-	100	85.057	Macaca_mulatta
ENSTBEG00000012523	-	100	99.487	ENSMMUG00000006804	LSM12	100	99.487	Macaca_mulatta
ENSTBEG00000012523	-	100	99.487	ENSMNEG00000030594	-	100	99.487	Macaca_nemestrina
ENSTBEG00000012523	-	100	99.487	ENSMLEG00000039934	LSM12	100	99.487	Mandrillus_leucophaeus
ENSTBEG00000012523	-	100	84.694	ENSMAMG00000004279	lsm12b	100	84.694	Mastacembelus_armatus
ENSTBEG00000012523	-	100	84.184	ENSMZEG00005005754	lsm12b	100	84.184	Maylandia_zebra
ENSTBEG00000012523	-	100	98.974	ENSMICG00000037219	LSM12	100	98.974	Microcebus_murinus
ENSTBEG00000012523	-	100	99.487	ENSMOCG00000019878	-	100	99.487	Microtus_ochrogaster
ENSTBEG00000012523	-	100	83.590	ENSMOCG00000017015	-	86	83.590	Microtus_ochrogaster
ENSTBEG00000012523	-	100	84.694	ENSMMOG00000020848	lsm12b	100	84.694	Mola_mola
ENSTBEG00000012523	-	100	84.694	ENSMALG00000007578	lsm12b	100	84.694	Monopterus_albus
ENSTBEG00000012523	-	100	98.974	MGP_CAROLIEiJ_G0017241	Lsm12	100	98.974	Mus_caroli
ENSTBEG00000012523	-	100	99.487	ENSMUSG00000020922	Lsm12	100	99.487	Mus_musculus
ENSTBEG00000012523	-	100	91.509	MGP_PahariEiJ_G0018371	Lsm12	100	91.509	Mus_pahari
ENSTBEG00000012523	-	100	98.974	MGP_SPRETEiJ_G0018084	Lsm12	99	100.000	Mus_spretus
ENSTBEG00000012523	-	100	98.974	ENSMLUG00000006391	LSM12	100	98.974	Myotis_lucifugus
ENSTBEG00000012523	-	100	66.832	ENSNGAG00000015429	-	100	66.832	Nannospalax_galili
ENSTBEG00000012523	-	100	99.487	ENSNGAG00000001870	Lsm12	100	99.487	Nannospalax_galili
ENSTBEG00000012523	-	100	84.184	ENSNBRG00000006266	lsm12b	100	84.184	Neolamprologus_brichardi
ENSTBEG00000012523	-	100	99.487	ENSNLEG00000005580	-	100	99.487	Nomascus_leucogenys
ENSTBEG00000012523	-	85	98.182	ENSMEUG00000007501	-	100	98.182	Notamacropus_eugenii
ENSTBEG00000012523	-	100	99.487	ENSOPRG00000008552	LSM12	100	99.487	Ochotona_princeps
ENSTBEG00000012523	-	100	88.205	ENSODEG00000007886	-	74	88.205	Octodon_degus
ENSTBEG00000012523	-	100	97.949	ENSODEG00000017998	-	100	97.949	Octodon_degus
ENSTBEG00000012523	-	100	84.184	ENSONIG00000007933	lsm12b	100	84.184	Oreochromis_niloticus
ENSTBEG00000012523	-	99	91.753	ENSOCUG00000024823	-	100	91.753	Oryctolagus_cuniculus
ENSTBEG00000012523	-	100	97.475	ENSOCUG00000008566	-	100	97.475	Oryctolagus_cuniculus
ENSTBEG00000012523	-	99	92.784	ENSOCUG00000021254	-	100	92.784	Oryctolagus_cuniculus
ENSTBEG00000012523	-	99	92.784	ENSOCUG00000027889	-	100	92.784	Oryctolagus_cuniculus
ENSTBEG00000012523	-	100	84.694	ENSORLG00000011310	lsm12b	100	84.694	Oryzias_latipes
ENSTBEG00000012523	-	100	84.694	ENSORLG00020002060	lsm12b	92	84.694	Oryzias_latipes_hni
ENSTBEG00000012523	-	100	84.694	ENSORLG00015001647	lsm12b	92	84.694	Oryzias_latipes_hsok
ENSTBEG00000012523	-	100	84.694	ENSOMEG00000006184	lsm12b	92	84.694	Oryzias_melastigma
ENSTBEG00000012523	-	100	98.974	ENSOGAG00000010489	LSM12	100	98.974	Otolemur_garnettii
ENSTBEG00000012523	-	100	96.020	ENSOARG00000006589	LSM12	100	96.020	Ovis_aries
ENSTBEG00000012523	-	100	89.231	ENSPPAG00000034974	-	92	100.000	Pan_paniscus
ENSTBEG00000012523	-	100	99.487	ENSPPRG00000023420	LSM12	100	99.487	Panthera_pardus
ENSTBEG00000012523	-	78	99.346	ENSPTIG00000012704	-	82	99.346	Panthera_tigris_altaica
ENSTBEG00000012523	-	73	95.495	ENSPTIG00000014850	-	100	95.495	Panthera_tigris_altaica
ENSTBEG00000012523	-	100	99.487	ENSPTRG00000009261	LSM12	100	99.487	Pan_troglodytes
ENSTBEG00000012523	-	100	99.487	ENSPANG00000021315	-	100	99.487	Papio_anubis
ENSTBEG00000012523	-	99	76.289	ENSPKIG00000017932	-	99	76.289	Paramormyrops_kingsleyae
ENSTBEG00000012523	-	100	85.714	ENSPKIG00000021058	lsm12b	100	85.714	Paramormyrops_kingsleyae
ENSTBEG00000012523	-	100	84.184	ENSPMGG00000021344	lsm12b	100	84.184	Periophthalmus_magnuspinnatus
ENSTBEG00000012523	-	100	99.487	ENSPEMG00000012199	Lsm12	100	99.487	Peromyscus_maniculatus_bairdii
ENSTBEG00000012523	-	88	66.279	ENSPMAG00000005461	lsm12a	99	66.279	Petromyzon_marinus
ENSTBEG00000012523	-	100	96.410	ENSPCIG00000020244	LSM12	100	96.410	Phascolarctos_cinereus
ENSTBEG00000012523	-	100	82.653	ENSPFOG00000015930	lsm12b	100	82.653	Poecilia_formosa
ENSTBEG00000012523	-	100	82.653	ENSPLAG00000021089	lsm12b	100	82.653	Poecilia_latipinna
ENSTBEG00000012523	-	100	82.653	ENSPMEG00000012961	lsm12b	100	82.653	Poecilia_mexicana
ENSTBEG00000012523	-	88	84.795	ENSPREG00000010236	lsm12b	95	84.795	Poecilia_reticulata
ENSTBEG00000012523	-	100	99.487	ENSPPYG00000008344	LSM12	100	99.487	Pongo_abelii
ENSTBEG00000012523	-	82	99.371	ENSPCAG00000008790	LSM12	100	99.371	Procavia_capensis
ENSTBEG00000012523	-	100	99.487	ENSPCOG00000027951	LSM12	100	99.487	Propithecus_coquereli
ENSTBEG00000012523	-	100	98.974	ENSPVAG00000013706	LSM12	100	98.974	Pteropus_vampyrus
ENSTBEG00000012523	-	100	84.184	ENSPNYG00000003386	lsm12b	100	84.184	Pundamilia_nyererei
ENSTBEG00000012523	-	100	82.653	ENSPNAG00000004186	lsm12b	100	82.653	Pygocentrus_nattereri
ENSTBEG00000012523	-	100	76.531	ENSPNAG00000018435	lsm12a	100	76.531	Pygocentrus_nattereri
ENSTBEG00000012523	-	100	99.487	ENSRNOG00000020894	Lsm12	100	99.487	Rattus_norvegicus
ENSTBEG00000012523	-	100	99.487	ENSRBIG00000027910	LSM12	100	99.487	Rhinopithecus_bieti
ENSTBEG00000012523	-	100	99.487	ENSRROG00000045530	-	100	99.487	Rhinopithecus_roxellana
ENSTBEG00000012523	-	100	60.000	ENSRROG00000000537	-	100	60.000	Rhinopithecus_roxellana
ENSTBEG00000012523	-	100	99.487	ENSSBOG00000025310	LSM12	100	99.487	Saimiri_boliviensis_boliviensis
ENSTBEG00000012523	-	81	93.671	ENSSHAG00000014914	LSM12	100	93.671	Sarcophilus_harrisii
ENSTBEG00000012523	-	100	82.653	ENSSFOG00015020392	lsm12a	100	82.653	Scleropages_formosus
ENSTBEG00000012523	-	100	85.714	ENSSFOG00015009612	lsm12	100	85.714	Scleropages_formosus
ENSTBEG00000012523	-	100	84.694	ENSSMAG00000008089	lsm12b	100	84.694	Scophthalmus_maximus
ENSTBEG00000012523	-	100	85.714	ENSSDUG00000012711	lsm12b	100	85.714	Seriola_dumerili
ENSTBEG00000012523	-	100	85.714	ENSSLDG00000007404	lsm12b	100	85.714	Seriola_lalandi_dorsalis
ENSTBEG00000012523	-	78	98.693	ENSSARG00000005537	LSM12	100	98.693	Sorex_araneus
ENSTBEG00000012523	-	99	94.301	ENSSPUG00000011984	LSM12	99	94.301	Sphenodon_punctatus
ENSTBEG00000012523	-	100	85.204	ENSSPAG00000017058	lsm12b	100	85.204	Stegastes_partitus
ENSTBEG00000012523	-	100	99.487	ENSSSCG00000032394	LSM12	100	99.487	Sus_scrofa
ENSTBEG00000012523	-	100	83.673	ENSTRUG00000007121	lsm12b	100	83.673	Takifugu_rubripes
ENSTBEG00000012523	-	100	84.184	ENSTNIG00000014436	lsm12b	100	84.184	Tetraodon_nigroviridis
ENSTBEG00000012523	-	100	99.487	ENSTTRG00000010433	LSM12	100	99.487	Tursiops_truncatus
ENSTBEG00000012523	-	100	99.487	ENSUAMG00000006313	LSM12	100	99.487	Ursus_americanus
ENSTBEG00000012523	-	81	96.203	ENSUMAG00000012987	LSM12	90	96.203	Ursus_maritimus
ENSTBEG00000012523	-	100	93.846	ENSVPAG00000011145	LSM12	100	93.846	Vicugna_pacos
ENSTBEG00000012523	-	100	99.487	ENSVVUG00000017581	LSM12	100	99.487	Vulpes_vulpes
ENSTBEG00000012523	-	82	65.000	ENSXETG00000003371	lsm12	77	65.000	Xenopus_tropicalis
ENSTBEG00000012523	-	100	83.673	ENSXCOG00000003994	lsm12b	100	83.673	Xiphophorus_couchianus
ENSTBEG00000012523	-	100	83.673	ENSXMAG00000020950	lsm12b	100	83.673	Xiphophorus_maculatus