EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000012570 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 22682 bases
Position: chrscaffold_9049:41613-64294
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000010910	CSD	PF00313.22	2.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000012591	YBX3-201	1092	-	ENSTBEP00000010910	363 (aa)	-	UPI0000F5E4B9

Gene Model

Click here to download ENSTBEG00000012570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000012570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000012570	YBX3	81	94.539	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSTBEG00000012570	YBX3	92	84.570	ENSAMEG00000009393	YBX3	97	83.191	Ailuropoda_melanoleuca
ENSTBEG00000012570	YBX3	78	67.018	ENSAPLG00000003147	YBX3	99	67.018	Anas_platyrhynchos
ENSTBEG00000012570	YBX3	81	95.222	ENSANAG00000024492	-	98	92.880	Aotus_nancymaae
ENSTBEG00000012570	YBX3	87	86.751	ENSBTAG00000009663	YBX3	100	76.316	Bos_taurus
ENSTBEG00000012570	YBX3	81	94.539	ENSCJAG00000021660	-	100	86.757	Callithrix_jacchus
ENSTBEG00000012570	YBX3	72	90.476	ENSCJAG00000033824	-	98	93.243	Callithrix_jacchus
ENSTBEG00000012570	YBX3	79	94.444	ENSCAFG00000013401	YBX3	84	95.880	Canis_familiaris
ENSTBEG00000012570	YBX3	81	90.444	ENSCAFG00020006412	YBX3	100	79.679	Canis_lupus_dingo
ENSTBEG00000012570	YBX3	87	86.751	ENSCHIG00000010863	YBX3	100	81.593	Capra_hircus
ENSTBEG00000012570	YBX3	100	51.491	ENSTSYG00000035821	-	100	47.105	Carlito_syrichta
ENSTBEG00000012570	YBX3	79	96.516	ENSTSYG00000004204	-	88	96.516	Carlito_syrichta
ENSTBEG00000012570	YBX3	79	88.153	ENSCAPG00000015039	YBX3	93	88.153	Cavia_aperea
ENSTBEG00000012570	YBX3	81	87.415	ENSCPOG00000011329	YBX3	91	85.065	Cavia_porcellus
ENSTBEG00000012570	YBX3	81	94.198	ENSCCAG00000016469	YBX3	100	86.022	Cebus_capucinus
ENSTBEG00000012570	YBX3	81	93.857	ENSCATG00000034411	YBX3	100	85.791	Cercocebus_atys
ENSTBEG00000012570	YBX3	79	89.199	ENSCLAG00000016030	YBX3	94	89.199	Chinchilla_lanigera
ENSTBEG00000012570	YBX3	81	94.198	ENSCSAG00000008744	YBX3	100	86.059	Chlorocebus_sabaeus
ENSTBEG00000012570	YBX3	76	67.442	ENSCHOG00000011988	YBX3	54	88.889	Choloepus_hoffmanni
ENSTBEG00000012570	YBX3	80	80.137	ENSCPBG00000014147	YBX3	100	68.407	Chrysemys_picta_bellii
ENSTBEG00000012570	YBX3	81	94.198	ENSCANG00000036801	YBX3	98	91.909	Colobus_angolensis_palliatus
ENSTBEG00000012570	YBX3	81	92.833	ENSCGRG00001016148	Ybx3	100	80.654	Cricetulus_griseus_chok1gshd
ENSTBEG00000012570	YBX3	79	92.808	ENSCGRG00000004563	Ybx3	98	91.438	Cricetulus_griseus_crigri
ENSTBEG00000012570	YBX3	78	92.606	ENSDORG00000009103	Ybx3	81	91.638	Dipodomys_ordii
ENSTBEG00000012570	YBX3	78	86.364	ENSETEG00000002557	YBX3	99	85.211	Echinops_telfairi
ENSTBEG00000012570	YBX3	88	81.562	ENSEASG00005014726	YBX3	100	78.108	Equus_asinus_asinus
ENSTBEG00000012570	YBX3	88	85.000	ENSECAG00000013777	YBX3	100	81.892	Equus_caballus
ENSTBEG00000012570	YBX3	78	94.366	ENSEEUG00000010415	YBX3	100	94.366	Erinaceus_europaeus
ENSTBEG00000012570	YBX3	87	89.623	ENSFCAG00000027748	YBX3	100	85.523	Felis_catus
ENSTBEG00000012570	YBX3	78	66.202	ENSFALG00000003661	YBX3	99	62.369	Ficedula_albicollis
ENSTBEG00000012570	YBX3	84	81.994	ENSFDAG00000021192	YBX3	92	85.366	Fukomys_damarensis
ENSTBEG00000012570	YBX3	72	79.333	ENSGALG00000031890	YBX3	76	85.321	Gallus_gallus
ENSTBEG00000012570	YBX3	80	79.110	ENSGAGG00000017780	YBX3	100	67.033	Gopherus_agassizii
ENSTBEG00000012570	YBX3	81	94.539	ENSGGOG00000001352	YBX3	100	86.327	Gorilla_gorilla
ENSTBEG00000012570	YBX3	83	75.738	ENSHGLG00000014798	-	93	73.668	Heterocephalus_glaber_female
ENSTBEG00000012570	YBX3	75	79.562	ENSHGLG00000015495	-	100	66.957	Heterocephalus_glaber_female
ENSTBEG00000012570	YBX3	55	96.591	ENSHGLG00100003589	YBX3	87	64.808	Heterocephalus_glaber_male
ENSTBEG00000012570	YBX3	81	87.713	ENSSTOG00000032577	-	100	78.904	Ictidomys_tridecemlineatus
ENSTBEG00000012570	YBX3	82	84.950	ENSSTOG00000002108	-	88	88.502	Ictidomys_tridecemlineatus
ENSTBEG00000012570	YBX3	81	66.892	ENSJJAG00000014239	Ybx3	95	79.310	Jaculus_jaculus
ENSTBEG00000012570	YBX3	100	83.198	ENSLAFG00000017247	YBX3	100	85.095	Loxodonta_africana
ENSTBEG00000012570	YBX3	81	93.857	ENSMFAG00000039369	YBX3	100	86.022	Macaca_fascicularis
ENSTBEG00000012570	YBX3	81	93.857	ENSMMUG00000022469	YBX3	99	89.164	Macaca_mulatta
ENSTBEG00000012570	YBX3	81	94.198	ENSMNEG00000045109	YBX3	100	86.290	Macaca_nemestrina
ENSTBEG00000012570	YBX3	93	82.353	ENSMLEG00000033618	YBX3	94	82.059	Mandrillus_leucophaeus
ENSTBEG00000012570	YBX3	71	79.592	ENSMGAG00000014224	YBX3	93	98.851	Meleagris_gallopavo
ENSTBEG00000012570	YBX3	90	85.583	ENSMAUG00000012185	Ybx3	99	84.356	Mesocricetus_auratus
ENSTBEG00000012570	YBX3	85	82.857	ENSMICG00000031459	-	100	82.857	Microcebus_murinus
ENSTBEG00000012570	YBX3	81	93.515	ENSMICG00000038002	-	100	84.097	Microcebus_murinus
ENSTBEG00000012570	YBX3	81	92.833	ENSMOCG00000016291	Ybx3	94	92.734	Microtus_ochrogaster
ENSTBEG00000012570	YBX3	79	83.681	ENSMODG00000018248	YBX3	91	84.375	Monodelphis_domestica
ENSTBEG00000012570	YBX3	83	90.698	MGP_CAROLIEiJ_G0028947	Ybx3	100	80.654	Mus_caroli
ENSTBEG00000012570	YBX3	83	90.698	ENSMUSG00000030189	Ybx3	100	80.654	Mus_musculus
ENSTBEG00000012570	YBX3	83	91.362	MGP_PahariEiJ_G0022709	Ybx3	100	81.199	Mus_pahari
ENSTBEG00000012570	YBX3	83	91.030	MGP_SPRETEiJ_G0029994	Ybx3	100	80.926	Mus_spretus
ENSTBEG00000012570	YBX3	92	72.754	ENSMPUG00000011810	YBX3	100	72.105	Mustela_putorius_furo
ENSTBEG00000012570	YBX3	73	95.167	ENSMLUG00000007476	YBX3	100	95.167	Myotis_lucifugus
ENSTBEG00000012570	YBX3	78	88.070	ENSNGAG00000000710	Ybx3	88	62.807	Nannospalax_galili
ENSTBEG00000012570	YBX3	81	90.444	ENSNLEG00000034844	YBX3	99	83.095	Nomascus_leucogenys
ENSTBEG00000012570	YBX3	81	83.333	ENSODEG00000017957	YBX3	96	78.287	Octodon_degus
ENSTBEG00000012570	YBX3	81	87.755	ENSOCUG00000001889	YBX3	89	84.466	Oryctolagus_cuniculus
ENSTBEG00000012570	YBX3	81	90.033	ENSOGAG00000013245	YBX3	100	82.058	Otolemur_garnettii
ENSTBEG00000012570	YBX3	81	77.966	ENSOARG00000020919	YBX3	97	83.162	Ovis_aries
ENSTBEG00000012570	YBX3	81	94.539	ENSPPAG00000039068	YBX3	86	92.508	Pan_paniscus
ENSTBEG00000012570	YBX3	88	89.028	ENSPPRG00000005859	YBX3	100	85.255	Panthera_pardus
ENSTBEG00000012570	YBX3	79	95.819	ENSPTIG00000005322	YBX3	81	95.819	Panthera_tigris_altaica
ENSTBEG00000012570	YBX3	81	94.539	ENSPTRG00000004681	YBX3	100	86.096	Pan_troglodytes
ENSTBEG00000012570	YBX3	81	93.857	ENSPANG00000010280	YBX3	100	86.022	Papio_anubis
ENSTBEG00000012570	YBX3	58	99.029	ENSPSIG00000009247	YBX3	91	100.000	Pelodiscus_sinensis
ENSTBEG00000012570	YBX3	90	85.276	ENSPEMG00000012132	-	100	84.969	Peromyscus_maniculatus_bairdii
ENSTBEG00000012570	YBX3	57	93.617	ENSPEMG00000010391	-	94	61.875	Peromyscus_maniculatus_bairdii
ENSTBEG00000012570	YBX3	71	81.923	ENSPCIG00000029949	YBX3	100	80.000	Phascolarctos_cinereus
ENSTBEG00000012570	YBX3	100	81.941	ENSPPYG00000004279	YBX3	100	86.523	Pongo_abelii
ENSTBEG00000012570	YBX3	59	93.427	ENSPCAG00000001397	YBX3	98	81.272	Procavia_capensis
ENSTBEG00000012570	YBX3	50	88.398	ENSPCOG00000011663	YBX3	100	78.431	Propithecus_coquereli
ENSTBEG00000012570	YBX3	81	77.816	ENSPVAG00000006740	YBX3	77	80.969	Pteropus_vampyrus
ENSTBEG00000012570	YBX3	81	93.174	ENSRNOG00000005480	Ybx3	100	80.654	Rattus_norvegicus
ENSTBEG00000012570	YBX3	81	94.198	ENSRBIG00000039208	YBX3	100	86.523	Rhinopithecus_bieti
ENSTBEG00000012570	YBX3	100	84.097	ENSRROG00000029638	YBX3	100	86.523	Rhinopithecus_roxellana
ENSTBEG00000012570	YBX3	87	88.959	ENSSBOG00000030573	YBX3	93	88.959	Saimiri_boliviensis_boliviensis
ENSTBEG00000012570	YBX3	78	81.724	ENSSHAG00000003262	YBX3	97	81.724	Sarcophilus_harrisii
ENSTBEG00000012570	YBX3	80	95.848	ENSSSCG00000000633	YBX3	100	83.202	Sus_scrofa
ENSTBEG00000012570	YBX3	72	86.466	ENSTTRG00000008045	YBX3	100	86.466	Tursiops_truncatus
ENSTBEG00000012570	YBX3	77	91.007	ENSUAMG00000016662	YBX3	100	90.647	Ursus_americanus
ENSTBEG00000012570	YBX3	78	93.662	ENSUMAG00000016118	YBX3	94	93.380	Ursus_maritimus
ENSTBEG00000012570	YBX3	78	73.592	ENSVPAG00000000876	YBX3	100	73.592	Vicugna_pacos
ENSTBEG00000012570	YBX3	77	91.007	ENSVVUG00000004956	YBX3	100	90.647	Vulpes_vulpes
ENSTBEG00000012570	YBX3	54	90.000	ENSXETG00000016239	ybx3	91	52.145	Xenopus_tropicalis