EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000012679 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 186761 bases
Position: chrGeneScaffold_3159:137059-323819
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000011033	Upf2	PF04050.14	1.3e-16	1	1
ENSTBEP00000011033	MIF4G	PF02854.19	2.4e-44	1	2
ENSTBEP00000011033	MIF4G	PF02854.19	2.4e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000012736	UPF2-201	3804	-	ENSTBEP00000011033	1267 (aa)	-	UPI0000F5FE9E

Gene Model

Click here to download ENSTBEG00000012679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000012679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000012679	UPF2	93	90.609	ENSG00000151461	UPF2	93	90.271	Homo_sapiens
ENSTBEG00000012679	UPF2	93	70.598	ENSAPOG00000015837	UPF2	93	69.840	Acanthochromis_polyacanthus
ENSTBEG00000012679	UPF2	93	90.771	ENSAMEG00000004586	UPF2	93	90.432	Ailuropoda_melanoleuca
ENSTBEG00000012679	UPF2	93	75.168	ENSACIG00000018078	UPF2	93	74.413	Amphilophus_citrinellus
ENSTBEG00000012679	UPF2	93	75.063	ENSAOCG00000016766	UPF2	93	74.307	Amphiprion_ocellaris
ENSTBEG00000012679	UPF2	93	75.063	ENSAPEG00000019084	UPF2	93	74.391	Amphiprion_percula
ENSTBEG00000012679	UPF2	93	74.812	ENSATEG00000021677	UPF2	92	74.937	Anabas_testudineus
ENSTBEG00000012679	UPF2	93	79.255	ENSAPLG00000010287	UPF2	83	83.585	Anas_platyrhynchos
ENSTBEG00000012679	UPF2	93	85.097	ENSACAG00000009259	UPF2	93	84.759	Anolis_carolinensis
ENSTBEG00000012679	UPF2	93	79.797	ENSANAG00000028451	UPF2	92	79.205	Aotus_nancymaae
ENSTBEG00000012679	UPF2	93	73.490	ENSACLG00000012696	UPF2	93	75.252	Astatotilapia_calliptera
ENSTBEG00000012679	UPF2	93	75.505	ENSAMXG00000013700	UPF2	92	75.694	Astyanax_mexicanus
ENSTBEG00000012679	UPF2	93	90.686	ENSBTAG00000000288	UPF2	93	90.347	Bos_taurus
ENSTBEG00000012679	UPF2	93	88.823	ENSCJAG00000020685	UPF2	93	89.763	Callithrix_jacchus
ENSTBEG00000012679	UPF2	93	90.855	ENSCAFG00000004839	UPF2	93	90.517	Canis_familiaris
ENSTBEG00000012679	UPF2	90	100.000	ENSCAFG00020005882	UPF2	93	100.000	Canis_lupus_dingo
ENSTBEG00000012679	UPF2	93	90.771	ENSCHIG00000020359	UPF2	93	90.432	Capra_hircus
ENSTBEG00000012679	UPF2	93	90.432	ENSTSYG00000000935	UPF2	89	98.864	Carlito_syrichta
ENSTBEG00000012679	UPF2	84	80.912	ENSCAPG00000016658	UPF2	89	81.006	Cavia_aperea
ENSTBEG00000012679	UPF2	92	86.286	ENSCPOG00000008809	UPF2	93	87.564	Cavia_porcellus
ENSTBEG00000012679	UPF2	93	84.687	ENSCCAG00000035991	UPF2	93	84.687	Cebus_capucinus
ENSTBEG00000012679	UPF2	93	90.863	ENSCATG00000032679	UPF2	93	90.525	Cercocebus_atys
ENSTBEG00000012679	UPF2	93	88.992	ENSCLAG00000011434	UPF2	93	89.416	Chinchilla_lanigera
ENSTBEG00000012679	UPF2	93	90.863	ENSCSAG00000013372	UPF2	93	90.525	Chlorocebus_sabaeus
ENSTBEG00000012679	UPF2	78	93.023	ENSCHOG00000000422	UPF2	80	90.698	Choloepus_hoffmanni
ENSTBEG00000012679	UPF2	93	85.605	ENSCPBG00000027823	UPF2	93	85.267	Chrysemys_picta_bellii
ENSTBEG00000012679	UPF2	71	42.888	ENSCSAVG00000007772	-	79	42.857	Ciona_savignyi
ENSTBEG00000012679	UPF2	93	87.563	ENSCANG00000040396	UPF2	94	88.230	Colobus_angolensis_palliatus
ENSTBEG00000012679	UPF2	93	90.925	ENSCGRG00001019347	Upf2	93	90.925	Cricetulus_griseus_chok1gshd
ENSTBEG00000012679	UPF2	93	90.925	ENSCGRG00000017993	Upf2	93	90.925	Cricetulus_griseus_crigri
ENSTBEG00000012679	UPF2	84	72.052	ENSCSEG00000003520	UPF2	92	69.270	Cynoglossus_semilaevis
ENSTBEG00000012679	UPF2	92	74.450	ENSCVAG00000006167	UPF2	94	72.420	Cyprinodon_variegatus
ENSTBEG00000012679	UPF2	93	90.517	ENSDNOG00000018160	UPF2	93	90.262	Dasypus_novemcinctus
ENSTBEG00000012679	UPF2	93	90.508	ENSDORG00000002478	Upf2	93	90.508	Dipodomys_ordii
ENSTBEG00000012679	UPF2	81	33.302	FBgn0029992	Upf2	73	35.839	Drosophila_melanogaster
ENSTBEG00000012679	UPF2	66	100.000	ENSETEG00000011583	-	60	100.000	Echinops_telfairi
ENSTBEG00000012679	UPF2	57	68.161	ENSEBUG00000012448	-	77	68.161	Eptatretus_burgeri
ENSTBEG00000012679	UPF2	93	89.077	ENSEASG00005019274	UPF2	99	89.500	Equus_asinus_asinus
ENSTBEG00000012679	UPF2	93	89.162	ENSECAG00000017022	UPF2	93	89.585	Equus_caballus
ENSTBEG00000012679	UPF2	74	92.694	ENSEEUG00000007819	UPF2	74	92.237	Erinaceus_europaeus
ENSTBEG00000012679	UPF2	93	73.339	ENSELUG00000012014	UPF2	93	74.415	Esox_lucius
ENSTBEG00000012679	UPF2	93	97.802	ENSFCAG00000005785	UPF2	85	98.864	Felis_catus
ENSTBEG00000012679	UPF2	93	85.182	ENSFALG00000001889	UPF2	91	85.690	Ficedula_albicollis
ENSTBEG00000012679	UPF2	93	89.153	ENSFDAG00000014348	UPF2	93	89.915	Fukomys_damarensis
ENSTBEG00000012679	UPF2	92	74.661	ENSFHEG00000009826	UPF2	93	72.712	Fundulus_heteroclitus
ENSTBEG00000012679	UPF2	84	75.843	ENSGMOG00000005557	UPF2	93	72.819	Gadus_morhua
ENSTBEG00000012679	UPF2	93	85.279	ENSGALG00000033772	UPF2	93	85.787	Gallus_gallus
ENSTBEG00000012679	UPF2	93	72.124	ENSGAFG00000020867	UPF2	93	71.956	Gambusia_affinis
ENSTBEG00000012679	UPF2	84	76.449	ENSGACG00000001080	UPF2	93	73.720	Gasterosteus_aculeatus
ENSTBEG00000012679	UPF2	93	85.859	ENSGAGG00000002700	UPF2	93	85.690	Gopherus_agassizii
ENSTBEG00000012679	UPF2	93	90.609	ENSGGOG00000001479	UPF2	93	90.271	Gorilla_gorilla
ENSTBEG00000012679	UPF2	93	73.490	ENSHBUG00000004249	UPF2	93	75.252	Haplochromis_burtoni
ENSTBEG00000012679	UPF2	93	88.315	ENSHGLG00000015176	-	93	89.500	Heterocephalus_glaber_female
ENSTBEG00000012679	UPF2	93	78.831	ENSHGLG00000003822	-	92	77.966	Heterocephalus_glaber_female
ENSTBEG00000012679	UPF2	93	85.932	ENSHGLG00100010036	UPF2	93	86.525	Heterocephalus_glaber_male
ENSTBEG00000012679	UPF2	93	72.932	ENSHCOG00000004025	UPF2	93	71.823	Hippocampus_comes
ENSTBEG00000012679	UPF2	93	74.454	ENSIPUG00000015524	UPF2	93	74.516	Ictalurus_punctatus
ENSTBEG00000012679	UPF2	93	90.847	ENSSTOG00000013075	UPF2	93	90.847	Ictidomys_tridecemlineatus
ENSTBEG00000012679	UPF2	93	89.237	ENSJJAG00000004913	Upf2	93	88.898	Jaculus_jaculus
ENSTBEG00000012679	UPF2	92	74.030	ENSKMAG00000001071	UPF2	93	72.274	Kryptolebias_marmoratus
ENSTBEG00000012679	UPF2	93	75.251	ENSLBEG00000016394	-	92	74.456	Labrus_bergylta
ENSTBEG00000012679	UPF2	78	76.234	ENSLBEG00000000728	-	92	75.529	Labrus_bergylta
ENSTBEG00000012679	UPF2	93	73.087	ENSLACG00000015945	UPF2	93	73.547	Latimeria_chalumnae
ENSTBEG00000012679	UPF2	92	77.929	ENSLOCG00000015698	UPF2	93	78.268	Lepisosteus_oculatus
ENSTBEG00000012679	UPF2	93	90.778	ENSMFAG00000043865	UPF2	93	90.440	Macaca_fascicularis
ENSTBEG00000012679	UPF2	93	90.778	ENSMMUG00000008241	UPF2	93	90.440	Macaca_mulatta
ENSTBEG00000012679	UPF2	81	89.561	ENSMNEG00000008062	UPF2	99	89.814	Macaca_nemestrina
ENSTBEG00000012679	UPF2	88	96.839	ENSMLEG00000036120	UPF2	93	96.839	Mandrillus_leucophaeus
ENSTBEG00000012679	UPF2	93	74.226	ENSMAMG00000018276	UPF2	93	73.596	Mastacembelus_armatus
ENSTBEG00000012679	UPF2	93	73.490	ENSMZEG00005021595	UPF2	93	75.252	Maylandia_zebra
ENSTBEG00000012679	UPF2	93	84.759	ENSMGAG00000004573	UPF2	93	85.267	Meleagris_gallopavo
ENSTBEG00000012679	UPF2	93	88.380	ENSMAUG00000016512	Upf2	93	88.380	Mesocricetus_auratus
ENSTBEG00000012679	UPF2	88	98.148	ENSMICG00000001716	UPF2	92	98.148	Microcebus_murinus
ENSTBEG00000012679	UPF2	93	88.634	ENSMOCG00000008263	Upf2	93	89.822	Microtus_ochrogaster
ENSTBEG00000012679	UPF2	93	72.544	ENSMMOG00000006528	UPF2	93	71.525	Mola_mola
ENSTBEG00000012679	UPF2	93	87.553	ENSMODG00000016794	UPF2	93	88.061	Monodelphis_domestica
ENSTBEG00000012679	UPF2	93	74.706	ENSMALG00000002663	UPF2	93	74.074	Monopterus_albus
ENSTBEG00000012679	UPF2	93	90.331	MGP_CAROLIEiJ_G0023157	Upf2	93	90.331	Mus_caroli
ENSTBEG00000012679	UPF2	93	90.331	ENSMUSG00000043241	Upf2	93	90.331	Mus_musculus
ENSTBEG00000012679	UPF2	93	90.076	MGP_PahariEiJ_G0019217	Upf2	93	90.076	Mus_pahari
ENSTBEG00000012679	UPF2	93	90.585	MGP_SPRETEiJ_G0024075	Upf2	93	90.585	Mus_spretus
ENSTBEG00000012679	UPF2	93	90.601	ENSMPUG00000001064	UPF2	93	90.262	Mustela_putorius_furo
ENSTBEG00000012679	UPF2	93	89.367	ENSMLUG00000000228	UPF2	93	88.945	Myotis_lucifugus
ENSTBEG00000012679	UPF2	93	73.490	ENSNBRG00000013629	UPF2	93	75.252	Neolamprologus_brichardi
ENSTBEG00000012679	UPF2	93	90.694	ENSNLEG00000012058	UPF2	93	90.355	Nomascus_leucogenys
ENSTBEG00000012679	UPF2	75	96.937	ENSOPRG00000006801	-	75	96.937	Ochotona_princeps
ENSTBEG00000012679	UPF2	93	88.654	ENSODEG00000001290	UPF2	93	89.077	Octodon_degus
ENSTBEG00000012679	UPF2	93	73.574	ENSONIG00000017991	UPF2	93	75.336	Oreochromis_niloticus
ENSTBEG00000012679	UPF2	93	89.057	ENSOCUG00000006230	UPF2	93	88.973	Oryctolagus_cuniculus
ENSTBEG00000012679	UPF2	93	73.953	ENSORLG00000017189	UPF2	93	73.636	Oryzias_latipes
ENSTBEG00000012679	UPF2	93	73.953	ENSORLG00020005969	UPF2	93	73.636	Oryzias_latipes_hni
ENSTBEG00000012679	UPF2	93	73.953	ENSORLG00015005713	UPF2	93	73.636	Oryzias_latipes_hsok
ENSTBEG00000012679	UPF2	93	73.367	ENSOMEG00000023420	UPF2	91	73.048	Oryzias_melastigma
ENSTBEG00000012679	UPF2	93	90.771	ENSOGAG00000005796	UPF2	93	90.432	Otolemur_garnettii
ENSTBEG00000012679	UPF2	93	90.617	ENSOARG00000014587	UPF2	93	90.279	Ovis_aries
ENSTBEG00000012679	UPF2	93	86.639	ENSPPAG00000037953	UPF2	93	87.384	Pan_paniscus
ENSTBEG00000012679	UPF2	93	90.517	ENSPPRG00000000690	UPF2	93	90.178	Panthera_pardus
ENSTBEG00000012679	UPF2	93	90.517	ENSPTIG00000008867	UPF2	93	90.178	Panthera_tigris_altaica
ENSTBEG00000012679	UPF2	93	90.609	ENSPTRG00000002291	UPF2	93	90.271	Pan_troglodytes
ENSTBEG00000012679	UPF2	93	90.778	ENSPANG00000023399	UPF2	93	90.440	Papio_anubis
ENSTBEG00000012679	UPF2	93	72.628	ENSPKIG00000025502	UPF2	93	74.727	Paramormyrops_kingsleyae
ENSTBEG00000012679	UPF2	59	91.235	ENSPSIG00000015158	UPF2	95	91.235	Pelodiscus_sinensis
ENSTBEG00000012679	UPF2	93	72.973	ENSPMGG00000005259	UPF2	93	72.382	Periophthalmus_magnuspinnatus
ENSTBEG00000012679	UPF2	86	95.044	ENSPEMG00000015731	Upf2	94	95.044	Peromyscus_maniculatus_bairdii
ENSTBEG00000012679	UPF2	93	87.214	ENSPCIG00000006656	UPF2	93	87.722	Phascolarctos_cinereus
ENSTBEG00000012679	UPF2	93	72.712	ENSPFOG00000017118	UPF2	93	72.460	Poecilia_formosa
ENSTBEG00000012679	UPF2	93	72.712	ENSPLAG00000005094	UPF2	93	72.460	Poecilia_latipinna
ENSTBEG00000012679	UPF2	93	72.712	ENSPMEG00000017009	UPF2	93	72.460	Poecilia_mexicana
ENSTBEG00000012679	UPF2	93	72.475	ENSPREG00000021880	UPF2	93	72.559	Poecilia_reticulata
ENSTBEG00000012679	UPF2	59	88.204	ENSPPYG00000002089	-	89	87.668	Pongo_abelii
ENSTBEG00000012679	UPF2	93	76.037	ENSPCAG00000000684	UPF2	93	75.783	Procavia_capensis
ENSTBEG00000012679	UPF2	93	87.542	ENSPCOG00000021656	UPF2	93	87.288	Propithecus_coquereli
ENSTBEG00000012679	UPF2	93	82.064	ENSPVAG00000017286	UPF2	93	81.895	Pteropus_vampyrus
ENSTBEG00000012679	UPF2	93	70.889	ENSPNYG00000017096	UPF2	93	72.651	Pundamilia_nyererei
ENSTBEG00000012679	UPF2	93	75.966	ENSPNAG00000009357	UPF2	93	76.218	Pygocentrus_nattereri
ENSTBEG00000012679	UPF2	93	84.193	ENSRNOG00000023593	Upf2	99	85.035	Rattus_norvegicus
ENSTBEG00000012679	UPF2	93	89.915	ENSRBIG00000037780	UPF2	93	89.915	Rhinopithecus_bieti
ENSTBEG00000012679	UPF2	93	90.940	ENSRROG00000043547	UPF2	93	90.940	Rhinopithecus_roxellana
ENSTBEG00000012679	UPF2	93	89.746	ENSSBOG00000020012	UPF2	93	90.178	Saimiri_boliviensis_boliviensis
ENSTBEG00000012679	UPF2	93	73.556	ENSSFOG00015023788	upf2	93	75.063	Scleropages_formosus
ENSTBEG00000012679	UPF2	83	74.718	ENSSMAG00000007637	UPF2	93	72.273	Scophthalmus_maximus
ENSTBEG00000012679	UPF2	93	75.483	ENSSDUG00000017244	UPF2	92	74.391	Seriola_dumerili
ENSTBEG00000012679	UPF2	93	73.968	ENSSLDG00000016866	UPF2	82	75.689	Seriola_lalandi_dorsalis
ENSTBEG00000012679	UPF2	93	88.230	ENSSARG00000008615	UPF2	93	87.892	Sorex_araneus
ENSTBEG00000012679	UPF2	93	83.065	ENSSPUG00000014544	UPF2	92	82.642	Sphenodon_punctatus
ENSTBEG00000012679	UPF2	61	88.318	ENSSSCG00000011117	-	90	87.805	Sus_scrofa
ENSTBEG00000012679	UPF2	93	85.690	ENSTGUG00000002163	-	93	85.605	Taeniopygia_guttata
ENSTBEG00000012679	UPF2	93	73.931	ENSTRUG00000007519	UPF2	92	73.216	Takifugu_rubripes
ENSTBEG00000012679	UPF2	93	72.469	ENSTNIG00000004453	UPF2	93	72.003	Tetraodon_nigroviridis
ENSTBEG00000012679	UPF2	93	88.992	ENSTTRG00000016388	UPF2	93	89.924	Tursiops_truncatus
ENSTBEG00000012679	UPF2	87	98.214	ENSUAMG00000023560	UPF2	92	98.214	Ursus_americanus
ENSTBEG00000012679	UPF2	93	90.855	ENSUMAG00000012953	UPF2	88	90.517	Ursus_maritimus
ENSTBEG00000012679	UPF2	82	85.578	ENSVPAG00000006763	UPF2	83	85.578	Vicugna_pacos
ENSTBEG00000012679	UPF2	93	90.855	ENSVVUG00000006166	UPF2	99	90.517	Vulpes_vulpes
ENSTBEG00000012679	UPF2	93	75.374	ENSXETG00000033103	UPF2	93	75.042	Xenopus_tropicalis
ENSTBEG00000012679	UPF2	93	72.124	ENSXCOG00000011604	UPF2	93	72.292	Xiphophorus_couchianus
ENSTBEG00000012679	UPF2	93	72.292	ENSXMAG00000017209	UPF2	93	72.208	Xiphophorus_maculatus