EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000012734 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 4381 bases
Position: chrGeneScaffold_5580:114457-118837
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000011031	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000012734	-	612	-	ENSTBEP00000011031	203 (aa)	-	UPI0000F60562

Gene Model

Click here to download ENSTBEG00000012734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000012734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000012734	-	83	31.250	ENSTBEG00000005463	DNAJC27	64	31.250
ENSTBEG00000012734	-	95	39.423	ENSTBEG00000005193	RAB34	80	39.423
ENSTBEG00000012734	-	86	46.629	ENSTBEG00000008074	RAB39B	84	46.629
ENSTBEG00000012734	-	87	42.553	ENSTBEG00000009702	RAB33A	79	42.553
ENSTBEG00000012734	-	58	62.712	ENSTBEG00000004630	RAB1B	90	62.712
ENSTBEG00000012734	-	95	38.021	ENSTBEG00000007092	RAB5C	89	38.021
ENSTBEG00000012734	-	80	49.383	ENSTBEG00000009832	RAB30	80	49.383
ENSTBEG00000012734	-	85	41.618	ENSTBEG00000004142	RAB25	73	41.618
ENSTBEG00000012734	-	80	41.071	ENSTBEG00000006468	RAB9B	83	41.071
ENSTBEG00000012734	-	67	55.147	ENSTBEG00000015207	RAB3A	87	55.147
ENSTBEG00000012734	-	64	47.287	ENSTBEG00000014750	-	100	47.287

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000012734	-	100	97.044	ENSG00000143545	RAB13	100	97.044	Homo_sapiens
ENSTBEG00000012734	-	87	83.616	ENSACIG00000008584	rab13	85	83.616	Amphilophus_citrinellus
ENSTBEG00000012734	-	100	96.552	ENSANAG00000030247	-	100	96.552	Aotus_nancymaae
ENSTBEG00000012734	-	99	80.198	ENSAMXG00000030712	rab13	99	80.198	Astyanax_mexicanus
ENSTBEG00000012734	-	100	95.074	ENSBTAG00000017604	RAB13	100	95.074	Bos_taurus
ENSTBEG00000012734	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSTBEG00000012734	-	100	95.567	ENSCJAG00000009933	-	100	95.567	Callithrix_jacchus
ENSTBEG00000012734	-	100	94.581	ENSCHIG00000022271	-	100	94.581	Capra_hircus
ENSTBEG00000012734	-	99	91.584	ENSCPOG00000011491	-	99	91.584	Cavia_porcellus
ENSTBEG00000012734	-	100	96.552	ENSCCAG00000028502	-	100	96.552	Cebus_capucinus
ENSTBEG00000012734	-	100	97.044	ENSCATG00000041779	-	100	97.044	Cercocebus_atys
ENSTBEG00000012734	-	100	91.626	ENSCLAG00000006603	-	100	91.626	Chinchilla_lanigera
ENSTBEG00000012734	-	100	97.044	ENSCANG00000036573	-	100	97.044	Colobus_angolensis_palliatus
ENSTBEG00000012734	-	100	94.581	ENSCGRG00001021505	Rab13	100	94.581	Cricetulus_griseus_chok1gshd
ENSTBEG00000012734	-	100	94.581	ENSCGRG00000012126	Rab13	100	94.581	Cricetulus_griseus_crigri
ENSTBEG00000012734	-	99	76.733	ENSCSEG00000002358	rab13	99	76.733	Cynoglossus_semilaevis
ENSTBEG00000012734	-	99	79.208	ENSDARG00000034771	rab13	99	79.208	Danio_rerio
ENSTBEG00000012734	-	100	95.074	ENSDORG00000001591	Rab13	100	95.074	Dipodomys_ordii
ENSTBEG00000012734	-	100	96.059	ENSEASG00005000683	-	100	96.059	Equus_asinus_asinus
ENSTBEG00000012734	-	100	96.059	ENSECAG00000016551	RAB13	100	96.059	Equus_caballus
ENSTBEG00000012734	-	99	91.089	ENSEEUG00000001233	-	99	91.089	Erinaceus_europaeus
ENSTBEG00000012734	-	99	77.723	ENSELUG00000012801	rab13	99	77.723	Esox_lucius
ENSTBEG00000012734	-	100	90.640	ENSFCAG00000045269	-	100	90.640	Felis_catus
ENSTBEG00000012734	-	65	97.727	ENSFDAG00000014469	-	100	97.727	Fukomys_damarensis
ENSTBEG00000012734	-	99	76.733	ENSFHEG00000021221	rab13	95	86.127	Fundulus_heteroclitus
ENSTBEG00000012734	-	99	76.733	ENSGACG00000011925	rab13	99	76.733	Gasterosteus_aculeatus
ENSTBEG00000012734	-	85	91.908	ENSGAGG00000000742	-	99	82.843	Gopherus_agassizii
ENSTBEG00000012734	-	100	97.044	ENSGGOG00000023693	RAB13	100	97.044	Gorilla_gorilla
ENSTBEG00000012734	-	100	89.655	ENSHGLG00000008749	RAB13	100	89.655	Heterocephalus_glaber_female
ENSTBEG00000012734	-	100	89.655	ENSHGLG00100013608	RAB13	100	89.655	Heterocephalus_glaber_male
ENSTBEG00000012734	-	99	74.752	ENSHCOG00000007440	rab13	95	86.705	Hippocampus_comes
ENSTBEG00000012734	-	99	78.500	ENSIPUG00000003199	rab13	99	78.500	Ictalurus_punctatus
ENSTBEG00000012734	-	100	96.059	ENSSTOG00000011222	-	100	96.059	Ictidomys_tridecemlineatus
ENSTBEG00000012734	-	100	93.103	ENSJJAG00000010575	Rab13	100	93.103	Jaculus_jaculus
ENSTBEG00000012734	-	99	77.500	ENSKMAG00000001908	rab13	99	77.500	Kryptolebias_marmoratus
ENSTBEG00000012734	-	99	78.000	ENSLBEG00000026779	rab13	99	78.000	Labrus_bergylta
ENSTBEG00000012734	-	85	79.070	ENSLACG00000008103	-	97	79.070	Latimeria_chalumnae
ENSTBEG00000012734	-	100	97.044	ENSMFAG00000041018	RAB13	100	97.044	Macaca_fascicularis
ENSTBEG00000012734	-	100	97.044	ENSMNEG00000028951	-	100	97.044	Macaca_nemestrina
ENSTBEG00000012734	-	100	97.044	ENSMLEG00000042247	-	100	97.044	Mandrillus_leucophaeus
ENSTBEG00000012734	-	99	76.733	ENSMAMG00000014602	rab13	99	76.733	Mastacembelus_armatus
ENSTBEG00000012734	-	100	94.089	ENSMAUG00000015713	Rab13	100	94.089	Mesocricetus_auratus
ENSTBEG00000012734	-	100	95.074	ENSMICG00000010340	-	100	95.074	Microcebus_murinus
ENSTBEG00000012734	-	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSTBEG00000012734	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSTBEG00000012734	-	100	92.118	MGP_CAROLIEiJ_G0025227	Rab13	100	92.118	Mus_caroli
ENSTBEG00000012734	-	100	91.133	ENSMUSG00000027935	Rab13	100	91.133	Mus_musculus
ENSTBEG00000012734	-	99	91.584	MGP_PahariEiJ_G0026671	Rab13	99	91.584	Mus_pahari
ENSTBEG00000012734	-	100	95.074	ENSNGAG00000010309	Rab13	100	95.074	Nannospalax_galili
ENSTBEG00000012734	-	99	76.733	ENSNBRG00000004124	rab13	99	76.733	Neolamprologus_brichardi
ENSTBEG00000012734	-	100	97.044	ENSNLEG00000028944	-	100	97.044	Nomascus_leucogenys
ENSTBEG00000012734	-	100	91.176	ENSMEUG00000009667	-	100	91.176	Notamacropus_eugenii
ENSTBEG00000012734	-	63	98.425	ENSODEG00000012634	-	100	98.425	Octodon_degus
ENSTBEG00000012734	-	100	90.640	ENSODEG00000010443	-	100	90.640	Octodon_degus
ENSTBEG00000012734	-	99	76.733	ENSONIG00000006340	rab13	99	76.733	Oreochromis_niloticus
ENSTBEG00000012734	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSTBEG00000012734	-	99	77.228	ENSOMEG00000008210	rab13	99	77.228	Oryzias_melastigma
ENSTBEG00000012734	-	99	91.089	ENSOGAG00000016969	-	99	91.089	Otolemur_garnettii
ENSTBEG00000012734	-	100	97.044	ENSPPAG00000028435	-	100	97.044	Pan_paniscus
ENSTBEG00000012734	-	100	90.640	ENSPPRG00000008865	-	100	90.640	Panthera_pardus
ENSTBEG00000012734	-	100	97.044	ENSPTRG00000001370	RAB13	100	97.044	Pan_troglodytes
ENSTBEG00000012734	-	100	97.044	ENSPANG00000004479	-	100	97.044	Papio_anubis
ENSTBEG00000012734	-	99	77.723	ENSPMGG00000007680	rab13	99	77.723	Periophthalmus_magnuspinnatus
ENSTBEG00000012734	-	53	98.148	ENSPEMG00000017353	-	81	98.148	Peromyscus_maniculatus_bairdii
ENSTBEG00000012734	-	100	91.667	ENSPCIG00000029350	-	100	91.667	Phascolarctos_cinereus
ENSTBEG00000012734	-	85	84.393	ENSPLAG00000005832	RAB13	93	84.393	Poecilia_latipinna
ENSTBEG00000012734	-	91	79.891	ENSPREG00000017567	rab13	99	75.743	Poecilia_reticulata
ENSTBEG00000012734	-	100	97.044	ENSPPYG00000000790	-	100	97.044	Pongo_abelii
ENSTBEG00000012734	-	100	96.552	ENSPCOG00000012189	-	100	96.552	Propithecus_coquereli
ENSTBEG00000012734	-	100	94.089	ENSPVAG00000011095	-	100	94.089	Pteropus_vampyrus
ENSTBEG00000012734	-	85	86.705	ENSPNAG00000004189	rab13	92	86.705	Pygocentrus_nattereri
ENSTBEG00000012734	-	100	92.118	ENSRNOG00000016733	Rab13	100	92.118	Rattus_norvegicus
ENSTBEG00000012734	-	100	96.552	ENSRBIG00000008552	-	100	96.552	Rhinopithecus_bieti
ENSTBEG00000012734	-	100	96.552	ENSRROG00000036885	-	100	96.552	Rhinopithecus_roxellana
ENSTBEG00000012734	-	100	96.552	ENSSBOG00000020342	-	100	96.552	Saimiri_boliviensis_boliviensis
ENSTBEG00000012734	-	100	91.176	ENSSHAG00000011866	-	100	91.176	Sarcophilus_harrisii
ENSTBEG00000012734	-	100	95.567	ENSSSCG00000006564	-	100	95.567	Sus_scrofa
ENSTBEG00000012734	-	99	78.218	ENSTRUG00000024177	rab13	99	78.218	Takifugu_rubripes
ENSTBEG00000012734	-	100	96.552	ENSTTRG00000011183	-	100	96.552	Tursiops_truncatus
ENSTBEG00000012734	-	71	82.639	ENSXETG00000020729	rab13	99	79.503	Xenopus_tropicalis
ENSTBEG00000012734	-	85	83.237	ENSXCOG00000019533	rab13	93	83.237	Xiphophorus_couchianus