EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000012771 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 42838 bases
Position: chrGeneScaffold_778:104306-147143
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000011082	PRP21_like_P	PF12230.8	3.2e-49	1	1
ENSTBEP00000011082	Surp	PF01805.20	3.7e-46	1	2
ENSTBEP00000011082	Surp	PF01805.20	3.7e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000012790	SF3A1-201	2382	-	ENSTBEP00000011082	793 (aa)	-	UPI0000F5EE7E

Gene Model

Click here to download ENSTBEG00000012771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000012771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000012771	SF3A1	100	91.551	ENSG00000099995	SF3A1	100	92.063	Homo_sapiens
ENSTBEG00000012771	SF3A1	100	77.736	ENSAPOG00000020465	sf3a1	99	78.581	Acanthochromis_polyacanthus
ENSTBEG00000012771	SF3A1	97	91.440	ENSAMEG00000007737	SF3A1	98	91.495	Ailuropoda_melanoleuca
ENSTBEG00000012771	SF3A1	100	77.987	ENSACIG00000020672	sf3a1	99	78.517	Amphilophus_citrinellus
ENSTBEG00000012771	SF3A1	100	77.610	ENSAOCG00000003060	sf3a1	98	79.167	Amphiprion_ocellaris
ENSTBEG00000012771	SF3A1	100	77.736	ENSAPEG00000010735	sf3a1	98	79.297	Amphiprion_percula
ENSTBEG00000012771	SF3A1	97	79.324	ENSATEG00000021201	sf3a1	98	78.792	Anabas_testudineus
ENSTBEG00000012771	SF3A1	95	87.318	ENSAPLG00000009057	SF3A1	99	86.581	Anas_platyrhynchos
ENSTBEG00000012771	SF3A1	100	80.542	ENSACAG00000009415	SF3A1	100	80.542	Anolis_carolinensis
ENSTBEG00000012771	SF3A1	100	91.551	ENSANAG00000032045	SF3A1	100	91.551	Aotus_nancymaae
ENSTBEG00000012771	SF3A1	100	77.834	ENSACLG00000012622	sf3a1	99	78.745	Astatotilapia_calliptera
ENSTBEG00000012771	SF3A1	99	76.991	ENSAMXG00000005382	sf3a1	99	77.735	Astyanax_mexicanus
ENSTBEG00000012771	SF3A1	100	91.803	ENSBTAG00000003390	SF3A1	100	91.803	Bos_taurus
ENSTBEG00000012771	SF3A1	77	50.877	WBGene00004188	prp-21	94	42.599	Caenorhabditis_elegans
ENSTBEG00000012771	SF3A1	100	91.677	ENSCJAG00000010370	SF3A1	100	91.677	Callithrix_jacchus
ENSTBEG00000012771	SF3A1	100	91.551	ENSCAFG00000012559	SF3A1	100	91.551	Canis_familiaris
ENSTBEG00000012771	SF3A1	100	91.551	ENSCAFG00020000838	SF3A1	100	91.551	Canis_lupus_dingo
ENSTBEG00000012771	SF3A1	100	91.677	ENSCHIG00000018642	SF3A1	100	91.677	Capra_hircus
ENSTBEG00000012771	SF3A1	100	91.803	ENSTSYG00000004739	SF3A1	100	91.803	Carlito_syrichta
ENSTBEG00000012771	SF3A1	85	82.647	ENSCAPG00000015414	SF3A1	89	82.647	Cavia_aperea
ENSTBEG00000012771	SF3A1	100	91.677	ENSCPOG00000014589	SF3A1	100	91.677	Cavia_porcellus
ENSTBEG00000012771	SF3A1	100	91.551	ENSCCAG00000032006	SF3A1	100	91.551	Cebus_capucinus
ENSTBEG00000012771	SF3A1	100	91.929	ENSCATG00000029241	SF3A1	100	91.929	Cercocebus_atys
ENSTBEG00000012771	SF3A1	100	91.047	ENSCLAG00000006508	SF3A1	100	91.047	Chinchilla_lanigera
ENSTBEG00000012771	SF3A1	100	91.803	ENSCSAG00000009470	SF3A1	100	91.803	Chlorocebus_sabaeus
ENSTBEG00000012771	SF3A1	59	98.095	ENSCHOG00000005201	SF3A1	66	98.095	Choloepus_hoffmanni
ENSTBEG00000012771	SF3A1	100	84.131	ENSCPBG00000007595	SF3A1	100	84.257	Chrysemys_picta_bellii
ENSTBEG00000012771	SF3A1	94	48.016	ENSCING00000008526	-	66	55.939	Ciona_intestinalis
ENSTBEG00000012771	SF3A1	96	47.613	ENSCSAVG00000005608	-	100	46.907	Ciona_savignyi
ENSTBEG00000012771	SF3A1	100	91.803	ENSCANG00000033564	SF3A1	100	91.803	Colobus_angolensis_palliatus
ENSTBEG00000012771	SF3A1	100	91.299	ENSCGRG00001008933	Sf3a1	100	91.299	Cricetulus_griseus_chok1gshd
ENSTBEG00000012771	SF3A1	100	91.299	ENSCGRG00000006127	Sf3a1	100	91.299	Cricetulus_griseus_crigri
ENSTBEG00000012771	SF3A1	100	75.879	ENSCSEG00000010792	sf3a1	98	77.113	Cynoglossus_semilaevis
ENSTBEG00000012771	SF3A1	100	77.233	ENSCVAG00000004560	sf3a1	98	78.182	Cyprinodon_variegatus
ENSTBEG00000012771	SF3A1	100	75.879	ENSDARG00000041887	sf3a1	88	87.821	Danio_rerio
ENSTBEG00000012771	SF3A1	98	91.753	ENSDNOG00000010629	SF3A1	100	91.069	Dasypus_novemcinctus
ENSTBEG00000012771	SF3A1	100	91.677	ENSDORG00000005613	Sf3a1	100	91.677	Dipodomys_ordii
ENSTBEG00000012771	SF3A1	79	59.065	FBgn0266917	Sf3a1	85	56.937	Drosophila_melanogaster
ENSTBEG00000012771	SF3A1	84	93.713	ENSETEG00000017194	SF3A1	100	91.738	Echinops_telfairi
ENSTBEG00000012771	SF3A1	100	60.941	ENSEBUG00000001285	sf3a1	96	61.852	Eptatretus_burgeri
ENSTBEG00000012771	SF3A1	100	92.055	ENSEASG00005010254	SF3A1	100	92.055	Equus_asinus_asinus
ENSTBEG00000012771	SF3A1	100	92.055	ENSECAG00000023962	SF3A1	100	92.055	Equus_caballus
ENSTBEG00000012771	SF3A1	69	100.000	ENSEEUG00000003159	SF3A1	78	100.000	Erinaceus_europaeus
ENSTBEG00000012771	SF3A1	100	76.190	ENSELUG00000022578	sf3a1	98	76.825	Esox_lucius
ENSTBEG00000012771	SF3A1	100	91.551	ENSFCAG00000011932	SF3A1	100	91.551	Felis_catus
ENSTBEG00000012771	SF3A1	95	86.376	ENSFALG00000006944	SF3A1	100	85.264	Ficedula_albicollis
ENSTBEG00000012771	SF3A1	100	91.425	ENSFDAG00000009560	SF3A1	100	91.425	Fukomys_damarensis
ENSTBEG00000012771	SF3A1	100	78.239	ENSFHEG00000010866	sf3a1	98	78.886	Fundulus_heteroclitus
ENSTBEG00000012771	SF3A1	100	75.063	ENSGMOG00000016024	sf3a1	97	75.097	Gadus_morhua
ENSTBEG00000012771	SF3A1	95	87.302	ENSGALG00000007937	SF3A1	100	85.768	Gallus_gallus
ENSTBEG00000012771	SF3A1	100	76.730	ENSGAFG00000009111	sf3a1	99	76.893	Gambusia_affinis
ENSTBEG00000012771	SF3A1	100	75.693	ENSGACG00000011893	sf3a1	97	76.402	Gasterosteus_aculeatus
ENSTBEG00000012771	SF3A1	96	83.968	ENSGAGG00000000762	SF3A1	99	84.100	Gopherus_agassizii
ENSTBEG00000012771	SF3A1	100	91.551	ENSGGOG00000012631	SF3A1	100	91.551	Gorilla_gorilla
ENSTBEG00000012771	SF3A1	100	77.834	ENSHBUG00000015795	sf3a1	99	78.745	Haplochromis_burtoni
ENSTBEG00000012771	SF3A1	100	91.677	ENSHGLG00000007907	SF3A1	100	91.677	Heterocephalus_glaber_female
ENSTBEG00000012771	SF3A1	100	91.677	ENSHGLG00100013799	SF3A1	100	91.677	Heterocephalus_glaber_male
ENSTBEG00000012771	SF3A1	100	74.088	ENSHCOG00000015423	sf3a1	99	74.323	Hippocampus_comes
ENSTBEG00000012771	SF3A1	96	75.651	ENSIPUG00000002470	sf3a1	98	75.911	Ictalurus_punctatus
ENSTBEG00000012771	SF3A1	100	91.929	ENSSTOG00000013892	SF3A1	100	91.929	Ictidomys_tridecemlineatus
ENSTBEG00000012771	SF3A1	100	91.562	ENSJJAG00000022566	Sf3a1	100	91.562	Jaculus_jaculus
ENSTBEG00000012771	SF3A1	100	76.604	ENSKMAG00000002400	sf3a1	98	78.385	Kryptolebias_marmoratus
ENSTBEG00000012771	SF3A1	100	76.352	ENSLBEG00000022974	sf3a1	99	76.774	Labrus_bergylta
ENSTBEG00000012771	SF3A1	100	80.678	ENSLACG00000003565	SF3A1	97	81.510	Latimeria_chalumnae
ENSTBEG00000012771	SF3A1	100	78.571	ENSLOCG00000008251	sf3a1	97	80.130	Lepisosteus_oculatus
ENSTBEG00000012771	SF3A1	100	91.677	ENSLAFG00000000448	SF3A1	100	91.677	Loxodonta_africana
ENSTBEG00000012771	SF3A1	98	57.875	ENSLAFG00000026032	-	98	58.003	Loxodonta_africana
ENSTBEG00000012771	SF3A1	100	91.677	ENSMFAG00000031979	SF3A1	100	91.677	Macaca_fascicularis
ENSTBEG00000012771	SF3A1	100	91.677	ENSMMUG00000005547	SF3A1	100	91.677	Macaca_mulatta
ENSTBEG00000012771	SF3A1	92	100.000	ENSMNEG00000037229	SF3A1	100	91.551	Macaca_nemestrina
ENSTBEG00000012771	SF3A1	100	91.803	ENSMLEG00000041908	SF3A1	100	91.803	Mandrillus_leucophaeus
ENSTBEG00000012771	SF3A1	97	79.172	ENSMAMG00000006460	sf3a1	97	79.301	Mastacembelus_armatus
ENSTBEG00000012771	SF3A1	100	77.834	ENSMZEG00005009633	sf3a1	99	78.745	Maylandia_zebra
ENSTBEG00000012771	SF3A1	95	87.302	ENSMGAG00000001330	SF3A1	99	86.563	Meleagris_gallopavo
ENSTBEG00000012771	SF3A1	92	87.875	ENSMAUG00000020317	Sf3a1	94	87.875	Mesocricetus_auratus
ENSTBEG00000012771	SF3A1	100	91.551	ENSMICG00000010038	SF3A1	100	91.551	Microcebus_murinus
ENSTBEG00000012771	SF3A1	100	91.551	ENSMOCG00000008438	Sf3a1	100	91.551	Microtus_ochrogaster
ENSTBEG00000012771	SF3A1	100	75.251	ENSMMOG00000015588	sf3a1	98	75.418	Mola_mola
ENSTBEG00000012771	SF3A1	100	90.542	ENSMODG00000009270	SF3A1	100	90.668	Monodelphis_domestica
ENSTBEG00000012771	SF3A1	100	78.212	ENSMALG00000000148	sf3a1	99	79.428	Monopterus_albus
ENSTBEG00000012771	SF3A1	100	90.794	MGP_CAROLIEiJ_G0016029	Sf3a1	98	90.734	Mus_caroli
ENSTBEG00000012771	SF3A1	100	90.794	ENSMUSG00000002129	Sf3a1	98	90.734	Mus_musculus
ENSTBEG00000012771	SF3A1	100	90.668	MGP_PahariEiJ_G0016862	Sf3a1	98	90.605	Mus_pahari
ENSTBEG00000012771	SF3A1	100	90.794	MGP_SPRETEiJ_G0016870	Sf3a1	98	90.734	Mus_spretus
ENSTBEG00000012771	SF3A1	100	91.551	ENSMPUG00000013144	SF3A1	100	91.551	Mustela_putorius_furo
ENSTBEG00000012771	SF3A1	100	91.677	ENSMLUG00000002139	SF3A1	100	91.677	Myotis_lucifugus
ENSTBEG00000012771	SF3A1	100	91.803	ENSNGAG00000016977	Sf3a1	100	91.803	Nannospalax_galili
ENSTBEG00000012771	SF3A1	100	78.086	ENSNBRG00000016642	sf3a1	96	80.105	Neolamprologus_brichardi
ENSTBEG00000012771	SF3A1	100	91.803	ENSNLEG00000003686	SF3A1	100	91.803	Nomascus_leucogenys
ENSTBEG00000012771	SF3A1	96	87.105	ENSMEUG00000008741	SF3A1	100	87.105	Notamacropus_eugenii
ENSTBEG00000012771	SF3A1	100	90.921	ENSOPRG00000016636	SF3A1	100	90.921	Ochotona_princeps
ENSTBEG00000012771	SF3A1	100	91.551	ENSODEG00000002571	SF3A1	100	91.551	Octodon_degus
ENSTBEG00000012771	SF3A1	100	77.484	ENSONIG00000010848	sf3a1	99	78.133	Oreochromis_niloticus
ENSTBEG00000012771	SF3A1	100	91.299	ENSOCUG00000007633	SF3A1	100	91.299	Oryctolagus_cuniculus
ENSTBEG00000012771	SF3A1	96	75.459	ENSORLG00000013050	sf3a1	98	77.089	Oryzias_latipes
ENSTBEG00000012771	SF3A1	96	76.115	ENSORLG00020003236	sf3a1	94	77.089	Oryzias_latipes_hni
ENSTBEG00000012771	SF3A1	100	75.975	ENSORLG00015017411	sf3a1	99	77.419	Oryzias_latipes_hsok
ENSTBEG00000012771	SF3A1	100	76.478	ENSOMEG00000013362	sf3a1	99	77.161	Oryzias_melastigma
ENSTBEG00000012771	SF3A1	100	91.299	ENSOGAG00000012931	SF3A1	100	91.299	Otolemur_garnettii
ENSTBEG00000012771	SF3A1	100	89.533	ENSOARG00000006849	SF3A1	100	89.533	Ovis_aries
ENSTBEG00000012771	SF3A1	100	90.542	ENSPPAG00000041790	SF3A1	100	90.542	Pan_paniscus
ENSTBEG00000012771	SF3A1	100	91.551	ENSPPRG00000004391	SF3A1	100	91.551	Panthera_pardus
ENSTBEG00000012771	SF3A1	97	91.321	ENSPTIG00000000844	SF3A1	100	91.321	Panthera_tigris_altaica
ENSTBEG00000012771	SF3A1	100	91.551	ENSPTRG00000014240	SF3A1	100	91.551	Pan_troglodytes
ENSTBEG00000012771	SF3A1	100	91.803	ENSPANG00000020772	SF3A1	100	91.803	Papio_anubis
ENSTBEG00000012771	SF3A1	78	98.246	ENSPSIG00000012803	SF3A1	91	98.246	Pelodiscus_sinensis
ENSTBEG00000012771	SF3A1	96	77.880	ENSPMGG00000023096	sf3a1	100	77.880	Periophthalmus_magnuspinnatus
ENSTBEG00000012771	SF3A1	100	91.551	ENSPEMG00000009494	Sf3a1	100	91.551	Peromyscus_maniculatus_bairdii
ENSTBEG00000012771	SF3A1	69	73.503	ENSPMAG00000007139	-	90	75.514	Petromyzon_marinus
ENSTBEG00000012771	SF3A1	100	90.164	ENSPCIG00000022692	SF3A1	100	90.416	Phascolarctos_cinereus
ENSTBEG00000012771	SF3A1	100	68.970	ENSPFOG00000016768	sf3a1	93	72.109	Poecilia_formosa
ENSTBEG00000012771	SF3A1	100	77.233	ENSPLAG00000017268	sf3a1	97	78.562	Poecilia_latipinna
ENSTBEG00000012771	SF3A1	84	78.464	ENSPMEG00000019811	sf3a1	98	77.711	Poecilia_mexicana
ENSTBEG00000012771	SF3A1	100	77.358	ENSPREG00000010347	sf3a1	97	78.954	Poecilia_reticulata
ENSTBEG00000012771	SF3A1	100	91.803	ENSPPYG00000011707	SF3A1	100	91.803	Pongo_abelii
ENSTBEG00000012771	SF3A1	54	99.074	ENSPCAG00000003266	SF3A1	53	99.074	Procavia_capensis
ENSTBEG00000012771	SF3A1	100	91.803	ENSPCOG00000026630	SF3A1	100	91.803	Propithecus_coquereli
ENSTBEG00000012771	SF3A1	100	87.516	ENSPVAG00000017719	SF3A1	94	90.470	Pteropus_vampyrus
ENSTBEG00000012771	SF3A1	100	77.834	ENSPNYG00000018706	sf3a1	99	78.745	Pundamilia_nyererei
ENSTBEG00000012771	SF3A1	96	78.934	ENSPNAG00000003721	sf3a1	98	78.804	Pygocentrus_nattereri
ENSTBEG00000012771	SF3A1	98	90.827	ENSRNOG00000005218	Sf3a1	98	90.862	Rattus_norvegicus
ENSTBEG00000012771	SF3A1	92	100.000	ENSRBIG00000032167	SF3A1	100	91.677	Rhinopithecus_bieti
ENSTBEG00000012771	SF3A1	100	91.677	ENSRROG00000044908	SF3A1	97	95.442	Rhinopithecus_roxellana
ENSTBEG00000012771	SF3A1	97	87.468	ENSSBOG00000021960	SF3A1	98	90.498	Saimiri_boliviensis_boliviensis
ENSTBEG00000012771	SF3A1	99	86.076	ENSSHAG00000003666	SF3A1	98	87.840	Sarcophilus_harrisii
ENSTBEG00000012771	SF3A1	100	76.625	ENSSFOG00015004579	sf3a1	99	78.333	Scleropages_formosus
ENSTBEG00000012771	SF3A1	100	75.094	ENSSMAG00000004275	sf3a1	98	75.911	Scophthalmus_maximus
ENSTBEG00000012771	SF3A1	100	77.736	ENSSDUG00000022219	sf3a1	99	77.920	Seriola_dumerili
ENSTBEG00000012771	SF3A1	100	77.736	ENSSLDG00000012642	sf3a1	99	77.920	Seriola_lalandi_dorsalis
ENSTBEG00000012771	SF3A1	97	88.083	ENSSARG00000005960	SF3A1	100	88.083	Sorex_araneus
ENSTBEG00000012771	SF3A1	96	85.363	ENSSPUG00000018863	SF3A1	100	85.075	Sphenodon_punctatus
ENSTBEG00000012771	SF3A1	100	77.987	ENSSPAG00000011856	sf3a1	99	78.323	Stegastes_partitus
ENSTBEG00000012771	SF3A1	100	91.677	ENSSSCG00000010002	SF3A1	97	95.442	Sus_scrofa
ENSTBEG00000012771	SF3A1	95	87.335	ENSTGUG00000010547	SF3A1	99	87.093	Taeniopygia_guttata
ENSTBEG00000012771	SF3A1	100	74.717	ENSTRUG00000006118	sf3a1	97	75.686	Takifugu_rubripes
ENSTBEG00000012771	SF3A1	64	76.208	ENSTNIG00000005713	sf3a1	73	75.836	Tetraodon_nigroviridis
ENSTBEG00000012771	SF3A1	100	90.680	ENSTTRG00000001535	SF3A1	100	90.806	Tursiops_truncatus
ENSTBEG00000012771	SF3A1	99	90.724	ENSUAMG00000006750	SF3A1	99	90.724	Ursus_americanus
ENSTBEG00000012771	SF3A1	99	90.331	ENSUMAG00000016665	SF3A1	98	91.569	Ursus_maritimus
ENSTBEG00000012771	SF3A1	100	91.551	ENSVVUG00000003075	SF3A1	100	91.551	Vulpes_vulpes
ENSTBEG00000012771	SF3A1	100	79.548	ENSXETG00000016144	sf3a1	100	79.046	Xenopus_tropicalis
ENSTBEG00000012771	SF3A1	100	76.478	ENSXCOG00000015653	sf3a1	99	76.637	Xiphophorus_couchianus
ENSTBEG00000012771	SF3A1	100	76.604	ENSXMAG00000002753	sf3a1	99	76.765	Xiphophorus_maculatus