EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000013133 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 12752 bases
Position: chrGeneScaffold_394:24463-37214
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000011389	KH_1	PF00013.29	1.7e-07	1	1
ENSTBEP00000011389	zf-CCHC	PF00098.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000013148	SF1-201	2064	-	ENSTBEP00000011389	687 (aa)	-	UPI0000F5DECE

Gene Model

Click here to download ENSTBEG00000013133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000013133's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000013133	SF1	66	92.325	ENSAMEG00000017828	SF1	71	92.358	Ailuropoda_melanoleuca
ENSTBEG00000013133	SF1	62	69.746	ENSACIG00000016514	sf1	62	71.014	Amphilophus_citrinellus
ENSTBEG00000013133	SF1	53	75.890	ENSAOCG00000010934	sf1	58	72.277	Amphiprion_ocellaris
ENSTBEG00000013133	SF1	53	75.890	ENSAPEG00000009498	sf1	58	72.277	Amphiprion_percula
ENSTBEG00000013133	SF1	55	74.211	ENSATEG00000001894	sf1	59	72.525	Anabas_testudineus
ENSTBEG00000013133	SF1	80	92.135	ENSANAG00000022607	-	88	92.135	Aotus_nancymaae
ENSTBEG00000013133	SF1	79	100.000	ENSANAG00000026664	-	85	100.000	Aotus_nancymaae
ENSTBEG00000013133	SF1	62	68.764	ENSACLG00000007633	sf1	61	73.284	Astatotilapia_calliptera
ENSTBEG00000013133	SF1	67	78.400	ENSAMXG00000003630	sf1	50	72.372	Astyanax_mexicanus
ENSTBEG00000013133	SF1	79	100.000	ENSBTAG00000001035	SF1	91	100.000	Bos_taurus
ENSTBEG00000013133	SF1	79	100.000	ENSCJAG00000002780	SF1	96	84.804	Callithrix_jacchus
ENSTBEG00000013133	SF1	66	92.544	ENSCAFG00000014239	SF1	72	92.576	Canis_familiaris
ENSTBEG00000013133	SF1	79	100.000	ENSCAFG00020014381	SF1	96	84.804	Canis_lupus_dingo
ENSTBEG00000013133	SF1	79	100.000	ENSCHIG00000025867	SF1	96	84.804	Capra_hircus
ENSTBEG00000013133	SF1	50	99.281	ENSTSYG00000033618	SF1	92	99.281	Carlito_syrichta
ENSTBEG00000013133	SF1	59	91.646	ENSCAPG00000010762	SF1	73	91.646	Cavia_aperea
ENSTBEG00000013133	SF1	66	92.105	ENSCPOG00000012290	SF1	85	92.140	Cavia_porcellus
ENSTBEG00000013133	SF1	83	100.000	ENSCCAG00000037881	SF1	88	100.000	Cebus_capucinus
ENSTBEG00000013133	SF1	81	82.675	ENSCCAG00000023781	-	88	82.483	Cebus_capucinus
ENSTBEG00000013133	SF1	79	100.000	ENSCATG00000011564	SF1	96	84.804	Cercocebus_atys
ENSTBEG00000013133	SF1	66	92.544	ENSCSAG00000007258	SF1	84	92.576	Chlorocebus_sabaeus
ENSTBEG00000013133	SF1	57	85.090	ENSCHOG00000006008	SF1	73	85.090	Choloepus_hoffmanni
ENSTBEG00000013133	SF1	66	82.599	ENSCPBG00000023763	SF1	59	82.751	Chrysemys_picta_bellii
ENSTBEG00000013133	SF1	64	53.691	ENSCSAVG00000009055	-	52	73.488	Ciona_savignyi
ENSTBEG00000013133	SF1	79	100.000	ENSCANG00000042201	SF1	96	84.804	Colobus_angolensis_palliatus
ENSTBEG00000013133	SF1	79	100.000	ENSCGRG00001003677	Sf1	96	84.641	Cricetulus_griseus_chok1gshd
ENSTBEG00000013133	SF1	67	91.558	ENSCGRG00000001708	Sf1	85	91.595	Cricetulus_griseus_crigri
ENSTBEG00000013133	SF1	66	64.463	ENSCSEG00000014375	sf1	59	70.309	Cynoglossus_semilaevis
ENSTBEG00000013133	SF1	54	77.717	ENSCVAG00000001670	sf1	63	73.219	Cyprinodon_variegatus
ENSTBEG00000013133	SF1	66	91.886	ENSDNOG00000001282	SF1	84	91.921	Dasypus_novemcinctus
ENSTBEG00000013133	SF1	79	100.000	ENSDORG00000016334	Sf1	96	84.804	Dipodomys_ordii
ENSTBEG00000013133	SF1	77	98.529	ENSETEG00000012830	SF1	73	98.529	Echinops_telfairi
ENSTBEG00000013133	SF1	66	92.105	ENSEASG00005018272	SF1	84	92.140	Equus_asinus_asinus
ENSTBEG00000013133	SF1	66	92.325	ENSECAG00000024544	SF1	84	92.358	Equus_caballus
ENSTBEG00000013133	SF1	53	90.385	ENSEEUG00000001058	SF1	93	90.385	Erinaceus_europaeus
ENSTBEG00000013133	SF1	66	92.544	ENSFCAG00000012231	SF1	72	92.576	Felis_catus
ENSTBEG00000013133	SF1	59	92.138	ENSFDAG00000009833	SF1	73	92.138	Fukomys_damarensis
ENSTBEG00000013133	SF1	54	75.881	ENSFHEG00000022656	sf1	59	72.973	Fundulus_heteroclitus
ENSTBEG00000013133	SF1	53	77.568	ENSGAFG00000019284	sf1	76	74.265	Gambusia_affinis
ENSTBEG00000013133	SF1	55	73.879	ENSGACG00000000826	sf1	67	70.297	Gasterosteus_aculeatus
ENSTBEG00000013133	SF1	66	82.379	ENSGAGG00000021691	SF1	64	82.533	Gopherus_agassizii
ENSTBEG00000013133	SF1	62	66.452	ENSHBUG00000011598	sf1	59	73.580	Haplochromis_burtoni
ENSTBEG00000013133	SF1	66	92.544	ENSHGLG00000009541	SF1	72	92.576	Heterocephalus_glaber_female
ENSTBEG00000013133	SF1	65	89.262	ENSHGLG00100013879	-	81	89.262	Heterocephalus_glaber_male
ENSTBEG00000013133	SF1	65	79.785	ENSHGLG00100008255	-	92	79.570	Heterocephalus_glaber_male
ENSTBEG00000013133	SF1	63	82.258	ENSHGLG00100008076	-	87	79.724	Heterocephalus_glaber_male
ENSTBEG00000013133	SF1	54	75.733	ENSHCOG00000011388	sf1	58	72.030	Hippocampus_comes
ENSTBEG00000013133	SF1	79	100.000	ENSSTOG00000009790	-	97	84.804	Ictidomys_tridecemlineatus
ENSTBEG00000013133	SF1	67	81.223	ENSSTOG00000024353	-	82	77.293	Ictidomys_tridecemlineatus
ENSTBEG00000013133	SF1	79	100.000	ENSJJAG00000011788	Sf1	96	84.967	Jaculus_jaculus
ENSTBEG00000013133	SF1	55	74.740	ENSKMAG00000005854	sf1	63	70.714	Kryptolebias_marmoratus
ENSTBEG00000013133	SF1	50	80.057	ENSLBEG00000019836	sf1	63	72.482	Labrus_bergylta
ENSTBEG00000013133	SF1	61	70.353	ENSLACG00000018493	SF1	75	68.868	Latimeria_chalumnae
ENSTBEG00000013133	SF1	80	99.099	ENSLAFG00000007201	SF1	92	99.099	Loxodonta_africana
ENSTBEG00000013133	SF1	79	100.000	ENSMFAG00000033122	SF1	96	84.804	Macaca_fascicularis
ENSTBEG00000013133	SF1	79	100.000	ENSMMUG00000022606	SF1	99	91.605	Macaca_mulatta
ENSTBEG00000013133	SF1	79	100.000	ENSMNEG00000037901	SF1	96	84.804	Macaca_nemestrina
ENSTBEG00000013133	SF1	81	100.000	ENSMLEG00000040706	SF1	89	91.304	Mandrillus_leucophaeus
ENSTBEG00000013133	SF1	53	76.216	ENSMAMG00000001780	sf1	58	73.020	Mastacembelus_armatus
ENSTBEG00000013133	SF1	62	66.452	ENSMZEG00005009196	sf1	59	73.580	Maylandia_zebra
ENSTBEG00000013133	SF1	66	92.325	ENSMAUG00000014064	Sf1	72	92.358	Mesocricetus_auratus
ENSTBEG00000013133	SF1	79	98.876	ENSMICG00000001202	SF1	93	91.688	Microcebus_murinus
ENSTBEG00000013133	SF1	66	92.105	ENSMOCG00000022038	Sf1	72	92.140	Microtus_ochrogaster
ENSTBEG00000013133	SF1	62	65.632	ENSMMOG00000020474	sf1	59	70.545	Mola_mola
ENSTBEG00000013133	SF1	59	91.176	ENSMODG00000029407	SF1	88	91.155	Monodelphis_domestica
ENSTBEG00000013133	SF1	62	69.746	ENSMALG00000020521	sf1	69	70.433	Monopterus_albus
ENSTBEG00000013133	SF1	79	98.876	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSTBEG00000013133	SF1	79	98.876	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSTBEG00000013133	SF1	79	98.876	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSTBEG00000013133	SF1	79	98.876	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSTBEG00000013133	SF1	79	100.000	ENSMPUG00000012684	SF1	96	84.641	Mustela_putorius_furo
ENSTBEG00000013133	SF1	64	87.359	ENSMLUG00000029800	-	76	87.359	Myotis_lucifugus
ENSTBEG00000013133	SF1	80	100.000	ENSMLUG00000015217	-	97	84.142	Myotis_lucifugus
ENSTBEG00000013133	SF1	66	92.763	ENSNGAG00000005550	Sf1	72	92.795	Nannospalax_galili
ENSTBEG00000013133	SF1	62	68.764	ENSNBRG00000017606	sf1	60	73.333	Neolamprologus_brichardi
ENSTBEG00000013133	SF1	79	100.000	ENSNLEG00000005236	-	87	100.000	Nomascus_leucogenys
ENSTBEG00000013133	SF1	66	91.778	ENSMEUG00000013424	SF1	85	91.814	Notamacropus_eugenii
ENSTBEG00000013133	SF1	60	91.283	ENSOPRG00000005008	SF1	84	91.325	Ochotona_princeps
ENSTBEG00000013133	SF1	66	90.132	ENSODEG00000006102	-	73	90.175	Octodon_degus
ENSTBEG00000013133	SF1	54	76.471	ENSONIG00000015728	sf1	59	73.333	Oreochromis_niloticus
ENSTBEG00000013133	SF1	57	81.888	ENSOANG00000002909	SF1	96	81.888	Ornithorhynchus_anatinus
ENSTBEG00000013133	SF1	66	92.325	ENSOCUG00000026486	SF1	73	92.358	Oryctolagus_cuniculus
ENSTBEG00000013133	SF1	55	75.131	ENSORLG00000011853	sf1	58	72.772	Oryzias_latipes
ENSTBEG00000013133	SF1	55	75.393	ENSORLG00020011834	sf1	58	72.772	Oryzias_latipes_hni
ENSTBEG00000013133	SF1	54	75.335	ENSORLG00015012855	sf1	58	72.525	Oryzias_latipes_hsok
ENSTBEG00000013133	SF1	54	75.134	ENSOMEG00000005210	sf1	59	73.020	Oryzias_melastigma
ENSTBEG00000013133	SF1	66	92.544	ENSOGAG00000016196	SF1	72	92.576	Otolemur_garnettii
ENSTBEG00000013133	SF1	66	92.544	ENSOARG00000009166	SF1	80	92.576	Ovis_aries
ENSTBEG00000013133	SF1	77	100.000	ENSPPAG00000002799	-	95	91.919	Pan_paniscus
ENSTBEG00000013133	SF1	77	100.000	ENSPPRG00000013566	SF1	97	84.422	Panthera_pardus
ENSTBEG00000013133	SF1	61	90.625	ENSPTIG00000016141	SF1	75	90.625	Panthera_tigris_altaica
ENSTBEG00000013133	SF1	75	100.000	ENSPTRG00000003846	SF1	95	92.138	Pan_troglodytes
ENSTBEG00000013133	SF1	67	92.560	ENSPANG00000020754	SF1	88	91.304	Papio_anubis
ENSTBEG00000013133	SF1	52	80.845	ENSPSIG00000003610	SF1	69	80.845	Pelodiscus_sinensis
ENSTBEG00000013133	SF1	67	91.757	ENSPEMG00000010463	Sf1	72	92.358	Peromyscus_maniculatus_bairdii
ENSTBEG00000013133	SF1	80	100.000	ENSPCIG00000018173	SF1	87	100.000	Phascolarctos_cinereus
ENSTBEG00000013133	SF1	54	76.944	ENSPFOG00000013683	sf1	66	74.510	Poecilia_formosa
ENSTBEG00000013133	SF1	55	75.457	ENSPLAG00000018076	sf1	61	73.464	Poecilia_latipinna
ENSTBEG00000013133	SF1	55	75.457	ENSPMEG00000005726	sf1	62	73.710	Poecilia_mexicana
ENSTBEG00000013133	SF1	62	66.595	ENSPREG00000004155	sf1	59	73.464	Poecilia_reticulata
ENSTBEG00000013133	SF1	66	92.544	ENSPPYG00000003098	-	87	92.576	Pongo_abelii
ENSTBEG00000013133	SF1	67	91.703	ENSPCAG00000013631	SF1	69	91.739	Procavia_capensis
ENSTBEG00000013133	SF1	79	98.876	ENSPCOG00000027546	SF1	93	91.688	Propithecus_coquereli
ENSTBEG00000013133	SF1	67	91.703	ENSPVAG00000016938	SF1	69	91.739	Pteropus_vampyrus
ENSTBEG00000013133	SF1	62	66.452	ENSPNYG00000004673	sf1	59	73.580	Pundamilia_nyererei
ENSTBEG00000013133	SF1	62	69.281	ENSPNAG00000013072	sf1	59	74.568	Pygocentrus_nattereri
ENSTBEG00000013133	SF1	79	98.876	ENSRNOG00000021085	Sf1	96	84.477	Rattus_norvegicus
ENSTBEG00000013133	SF1	79	100.000	ENSRBIG00000042818	SF1	88	100.000	Rhinopithecus_bieti
ENSTBEG00000013133	SF1	67	92.560	ENSRROG00000045655	SF1	92	91.791	Rhinopithecus_roxellana
ENSTBEG00000013133	SF1	82	87.619	ENSSBOG00000022267	-	90	87.619	Saimiri_boliviensis_boliviensis
ENSTBEG00000013133	SF1	61	85.036	ENSSHAG00000006841	SF1	77	85.036	Sarcophilus_harrisii
ENSTBEG00000013133	SF1	71	74.495	ENSSFOG00015021978	sf1	53	75.815	Scleropages_formosus
ENSTBEG00000013133	SF1	68	63.065	ENSSMAG00000007549	sf1	62	71.776	Scophthalmus_maximus
ENSTBEG00000013133	SF1	50	75.532	ENSSDUG00000003903	sf1	61	72.277	Seriola_dumerili
ENSTBEG00000013133	SF1	62	65.727	ENSSLDG00000013075	sf1	59	72.277	Seriola_lalandi_dorsalis
ENSTBEG00000013133	SF1	66	84.868	ENSSARG00000008180	SF1	88	84.498	Sorex_araneus
ENSTBEG00000013133	SF1	64	78.649	ENSSPUG00000012907	SF1	77	78.186	Sphenodon_punctatus
ENSTBEG00000013133	SF1	53	75.676	ENSSPAG00000019060	sf1	58	72.277	Stegastes_partitus
ENSTBEG00000013133	SF1	79	100.000	ENSSSCG00000013021	SF1	96	84.641	Sus_scrofa
ENSTBEG00000013133	SF1	57	64.322	ENSTNIG00000004820	sf1	53	79.433	Tetraodon_nigroviridis
ENSTBEG00000013133	SF1	66	87.500	ENSTTRG00000008857	SF1	85	87.555	Tursiops_truncatus
ENSTBEG00000013133	SF1	64	100.000	ENSUAMG00000011977	SF1	97	78.937	Ursus_americanus
ENSTBEG00000013133	SF1	71	100.000	ENSUMAG00000007268	SF1	88	100.000	Ursus_maritimus
ENSTBEG00000013133	SF1	52	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSTBEG00000013133	SF1	66	92.544	ENSVVUG00000028585	SF1	84	92.576	Vulpes_vulpes
ENSTBEG00000013133	SF1	78	71.778	ENSXETG00000008434	sf1	64	75.245	Xenopus_tropicalis
ENSTBEG00000013133	SF1	53	78.082	ENSXCOG00000003704	sf1	75	74.752	Xiphophorus_couchianus
ENSTBEG00000013133	SF1	55	75.000	ENSXMAG00000007822	sf1	61	73.710	Xiphophorus_maculatus