EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000013294 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 24488 bases
Position: chrGeneScaffold_3672:36387-60874
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000011544	RNA_pol_Rpb1_5	PF04998.17	3.7e-31	1	1
ENSTBEP00000011544	RNA_pol_Rpb1_R	PF05001.13	6e-08	1	5
ENSTBEP00000011544	RNA_pol_Rpb1_R	PF05001.13	6e-08	2	5
ENSTBEP00000011544	RNA_pol_Rpb1_R	PF05001.13	6e-08	3	5
ENSTBEP00000011544	RNA_pol_Rpb1_R	PF05001.13	6e-08	4	5
ENSTBEP00000011544	RNA_pol_Rpb1_R	PF05001.13	6e-08	5	5
ENSTBEP00000011544	RNA_pol_Rpb1_4	PF05000.17	4e-38	1	1
ENSTBEP00000011544	RNA_pol_Rpb1_2	PF00623.20	2.6e-73	1	1
ENSTBEP00000011544	RNA_pol_Rpb1_3	PF04983.18	7.4e-50	1	1
ENSTBEP00000011544	RNA_pol_Rpb1_1	PF04997.12	5.5e-50	1	2
ENSTBEP00000011544	RNA_pol_Rpb1_1	PF04997.12	5.5e-50	2	2
ENSTBEP00000011544	RNA_pol_Rpb1_7	PF04990.12	3.2e-40	1	1
ENSTBEP00000011544	RNA_pol_Rpb1_6	PF04992.14	1.5e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000013329	-	5904	-	ENSTBEP00000011544	1967 (aa)	-	UPI0000F5DDC6

Gene Model

Click here to download ENSTBEG00000013294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000013294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000013294	-	53	94.087	ENSAPOG00000006552	polr2a	68	94.087	Acanthochromis_polyacanthus
ENSTBEG00000013294	-	58	100.000	ENSAMEG00000016265	-	77	100.000	Ailuropoda_melanoleuca
ENSTBEG00000013294	-	58	94.898	ENSACIG00000015982	polr2a	76	94.898	Amphilophus_citrinellus
ENSTBEG00000013294	-	58	94.898	ENSAOCG00000004255	polr2a	75	94.898	Amphiprion_ocellaris
ENSTBEG00000013294	-	58	94.898	ENSAPEG00000012623	polr2a	76	94.898	Amphiprion_percula
ENSTBEG00000013294	-	58	94.898	ENSATEG00000019644	polr2a	76	94.898	Anabas_testudineus
ENSTBEG00000013294	-	58	98.980	ENSACAG00000014561	POLR2A	74	98.980	Anolis_carolinensis
ENSTBEG00000013294	-	58	100.000	ENSANAG00000020093	-	76	100.000	Aotus_nancymaae
ENSTBEG00000013294	-	58	94.898	ENSACLG00000006735	polr2a	76	94.898	Astatotilapia_calliptera
ENSTBEG00000013294	-	58	94.898	ENSAMXG00000020046	polr2a	76	94.898	Astyanax_mexicanus
ENSTBEG00000013294	-	58	100.000	ENSBTAG00000046765	POLR2A	74	100.000	Bos_taurus
ENSTBEG00000013294	-	57	74.474	WBGene00000123	ama-1	72	75.269	Caenorhabditis_elegans
ENSTBEG00000013294	-	58	100.000	ENSCAFG00000016532	POLR2A	74	100.000	Canis_familiaris
ENSTBEG00000013294	-	58	100.000	ENSCAFG00020007929	-	76	100.000	Canis_lupus_dingo
ENSTBEG00000013294	-	58	100.000	ENSCHIG00000027173	-	74	100.000	Capra_hircus
ENSTBEG00000013294	-	58	100.000	ENSTSYG00000012803	-	76	100.000	Carlito_syrichta
ENSTBEG00000013294	-	57	100.000	ENSCAPG00000001882	-	75	100.000	Cavia_aperea
ENSTBEG00000013294	-	58	100.000	ENSCPOG00000014812	-	75	100.000	Cavia_porcellus
ENSTBEG00000013294	-	58	100.000	ENSCCAG00000020938	-	76	100.000	Cebus_capucinus
ENSTBEG00000013294	-	58	99.869	ENSCATG00000013680	-	76	99.441	Cercocebus_atys
ENSTBEG00000013294	-	58	100.000	ENSCLAG00000012196	-	76	100.000	Chinchilla_lanigera
ENSTBEG00000013294	-	53	99.869	ENSCSAG00000011644	-	68	99.869	Chlorocebus_sabaeus
ENSTBEG00000013294	-	58	98.160	ENSCPBG00000012697	POLR2A	75	98.160	Chrysemys_picta_bellii
ENSTBEG00000013294	-	57	81.034	ENSCING00000007884	-	73	81.034	Ciona_intestinalis
ENSTBEG00000013294	-	56	84.848	ENSCSAVG00000008334	-	73	84.112	Ciona_savignyi
ENSTBEG00000013294	-	58	99.441	ENSCANG00000010622	-	76	99.441	Colobus_angolensis_palliatus
ENSTBEG00000013294	-	58	100.000	ENSCGRG00001003538	Polr2a	76	100.000	Cricetulus_griseus_chok1gshd
ENSTBEG00000013294	-	53	100.000	ENSCGRG00000012105	Polr2a	72	100.000	Cricetulus_griseus_crigri
ENSTBEG00000013294	-	58	94.898	ENSCSEG00000002635	polr2a	76	94.898	Cynoglossus_semilaevis
ENSTBEG00000013294	-	58	94.898	ENSCVAG00000005156	polr2a	74	94.898	Cyprinodon_variegatus
ENSTBEG00000013294	-	58	94.898	ENSDARG00000099966	polr2a	74	94.898	Danio_rerio
ENSTBEG00000013294	-	58	99.441	ENSDNOG00000016482	-	74	99.441	Dasypus_novemcinctus
ENSTBEG00000013294	-	58	100.000	ENSDORG00000008667	Polr2a	76	100.000	Dipodomys_ordii
ENSTBEG00000013294	-	57	80.172	FBgn0003277	RpII215	74	80.172	Drosophila_melanogaster
ENSTBEG00000013294	-	50	99.843	ENSETEG00000002540	-	62	99.843	Echinops_telfairi
ENSTBEG00000013294	-	58	89.655	ENSEBUG00000013967	polr2a	74	89.655	Eptatretus_burgeri
ENSTBEG00000013294	-	58	100.000	ENSEASG00005019114	-	75	100.000	Equus_asinus_asinus
ENSTBEG00000013294	-	58	100.000	ENSECAG00000018485	POLR2A	74	100.000	Equus_caballus
ENSTBEG00000013294	-	53	99.869	ENSEEUG00000001154	-	68	99.869	Erinaceus_europaeus
ENSTBEG00000013294	-	58	93.430	ENSELUG00000014284	polr2a	75	93.430	Esox_lucius
ENSTBEG00000013294	-	58	99.869	ENSFDAG00000008287	-	75	99.869	Fukomys_damarensis
ENSTBEG00000013294	-	58	94.744	ENSFHEG00000001768	polr2a	74	94.744	Fundulus_heteroclitus
ENSTBEG00000013294	-	56	100.000	ENSGMOG00000007725	polr2a	65	100.000	Gadus_morhua
ENSTBEG00000013294	-	57	94.481	ENSGAFG00000005389	polr2a	74	94.481	Gambusia_affinis
ENSTBEG00000013294	-	57	93.438	ENSGACG00000019366	polr2a	70	93.438	Gasterosteus_aculeatus
ENSTBEG00000013294	-	58	100.000	ENSGGOG00000014800	-	82	100.000	Gorilla_gorilla
ENSTBEG00000013294	-	58	94.087	ENSHBUG00000018937	polr2a	74	94.087	Haplochromis_burtoni
ENSTBEG00000013294	-	58	99.869	ENSHGLG00000012381	POLR2A	76	99.869	Heterocephalus_glaber_female
ENSTBEG00000013294	-	58	99.869	ENSHGLG00100014843	POLR2A	76	99.869	Heterocephalus_glaber_male
ENSTBEG00000013294	-	58	93.878	ENSHCOG00000011874	polr2a	74	93.878	Hippocampus_comes
ENSTBEG00000013294	-	58	94.898	ENSIPUG00000002613	Polr2a	76	94.898	Ictalurus_punctatus
ENSTBEG00000013294	-	58	100.000	ENSSTOG00000001304	-	76	100.000	Ictidomys_tridecemlineatus
ENSTBEG00000013294	-	58	99.737	ENSJJAG00000013049	Polr2a	76	99.737	Jaculus_jaculus
ENSTBEG00000013294	-	58	94.898	ENSLBEG00000027652	polr2a	76	94.898	Labrus_bergylta
ENSTBEG00000013294	-	57	98.980	ENSLACG00000012071	POLR2A	75	98.980	Latimeria_chalumnae
ENSTBEG00000013294	-	58	96.939	ENSLOCG00000013863	polr2a	76	96.939	Lepisosteus_oculatus
ENSTBEG00000013294	-	58	100.000	ENSLAFG00000008626	-	74	100.000	Loxodonta_africana
ENSTBEG00000013294	-	58	99.869	ENSMMUG00000023620	-	76	99.869	Macaca_mulatta
ENSTBEG00000013294	-	58	99.869	ENSMNEG00000040407	-	75	99.869	Macaca_nemestrina
ENSTBEG00000013294	-	58	98.980	ENSMLEG00000030263	-	85	99.441	Mandrillus_leucophaeus
ENSTBEG00000013294	-	58	94.898	ENSMAMG00000003351	polr2a	74	94.898	Mastacembelus_armatus
ENSTBEG00000013294	-	58	94.898	ENSMZEG00005021429	polr2a	76	94.898	Maylandia_zebra
ENSTBEG00000013294	-	58	99.737	ENSMICG00000013372	-	84	99.441	Microcebus_murinus
ENSTBEG00000013294	-	58	100.000	ENSMOCG00000018279	Polr2a	77	100.000	Microtus_ochrogaster
ENSTBEG00000013294	-	56	94.286	ENSMMOG00000012515	polr2a	70	93.824	Mola_mola
ENSTBEG00000013294	-	58	99.441	ENSMODG00000007009	-	74	99.441	Monodelphis_domestica
ENSTBEG00000013294	-	58	93.955	ENSMALG00000008716	polr2a	75	93.955	Monopterus_albus
ENSTBEG00000013294	-	58	100.000	MGP_CAROLIEiJ_G0016587	Polr2a	76	100.000	Mus_caroli
ENSTBEG00000013294	-	58	100.000	ENSMUSG00000005198	Polr2a	76	100.000	Mus_musculus
ENSTBEG00000013294	-	57	100.000	MGP_PahariEiJ_G0017718	Polr2a	73	100.000	Mus_pahari
ENSTBEG00000013294	-	58	100.000	MGP_SPRETEiJ_G0017423	Polr2a	76	100.000	Mus_spretus
ENSTBEG00000013294	-	58	100.000	ENSMPUG00000009648	-	74	100.000	Mustela_putorius_furo
ENSTBEG00000013294	-	58	99.737	ENSMLUG00000009088	-	74	99.737	Myotis_lucifugus
ENSTBEG00000013294	-	58	100.000	ENSNGAG00000002543	Polr2a	76	100.000	Nannospalax_galili
ENSTBEG00000013294	-	58	94.898	ENSNBRG00000002005	polr2a	76	94.898	Neolamprologus_brichardi
ENSTBEG00000013294	-	58	100.000	ENSNLEG00000009460	-	76	100.000	Nomascus_leucogenys
ENSTBEG00000013294	-	58	99.441	ENSMEUG00000008611	-	68	99.441	Notamacropus_eugenii
ENSTBEG00000013294	-	53	100.000	ENSOPRG00000015116	-	67	100.000	Ochotona_princeps
ENSTBEG00000013294	-	58	100.000	ENSODEG00000017674	-	77	100.000	Octodon_degus
ENSTBEG00000013294	-	58	94.898	ENSONIG00000009231	polr2a	74	94.898	Oreochromis_niloticus
ENSTBEG00000013294	-	58	100.000	ENSOCUG00000017929	-	74	100.000	Oryctolagus_cuniculus
ENSTBEG00000013294	-	58	94.898	ENSORLG00000006431	polr2a	74	94.898	Oryzias_latipes
ENSTBEG00000013294	-	58	94.898	ENSORLG00020010235	polr2a	74	94.898	Oryzias_latipes_hni
ENSTBEG00000013294	-	58	94.898	ENSORLG00015007075	polr2a	74	94.898	Oryzias_latipes_hsok
ENSTBEG00000013294	-	53	94.087	ENSOMEG00000010713	polr2a	68	94.087	Oryzias_melastigma
ENSTBEG00000013294	-	58	100.000	ENSOGAG00000033608	-	74	100.000	Otolemur_garnettii
ENSTBEG00000013294	-	57	100.000	ENSOARG00000013874	-	73	100.000	Ovis_aries
ENSTBEG00000013294	-	58	100.000	ENSPPAG00000043734	-	76	100.000	Pan_paniscus
ENSTBEG00000013294	-	58	100.000	ENSPTRG00000008691	POLR2A	76	100.000	Pan_troglodytes
ENSTBEG00000013294	-	58	99.441	ENSPANG00000024099	-	76	99.441	Papio_anubis
ENSTBEG00000013294	-	53	93.561	ENSPKIG00000005727	polr2a	63	93.561	Paramormyrops_kingsleyae
ENSTBEG00000013294	-	53	96.648	ENSPSIG00000014006	POLR2A	70	96.648	Pelodiscus_sinensis
ENSTBEG00000013294	-	58	94.350	ENSPMGG00000019734	polr2a	71	94.350	Periophthalmus_magnuspinnatus
ENSTBEG00000013294	-	58	100.000	ENSPEMG00000012521	Polr2a	76	100.000	Peromyscus_maniculatus_bairdii
ENSTBEG00000013294	-	53	99.441	ENSPCIG00000028851	-	54	99.441	Phascolarctos_cinereus
ENSTBEG00000013294	-	56	94.481	ENSPFOG00000007890	polr2a	73	94.481	Poecilia_formosa
ENSTBEG00000013294	-	56	94.481	ENSPLAG00000007399	polr2a	73	94.481	Poecilia_latipinna
ENSTBEG00000013294	-	56	94.481	ENSPMEG00000002071	polr2a	75	94.481	Poecilia_mexicana
ENSTBEG00000013294	-	58	94.898	ENSPREG00000013122	polr2a	76	94.898	Poecilia_reticulata
ENSTBEG00000013294	-	58	100.000	ENSPPYG00000007924	-	74	100.000	Pongo_abelii
ENSTBEG00000013294	-	50	100.000	ENSPCAG00000006951	-	66	100.000	Procavia_capensis
ENSTBEG00000013294	-	58	100.000	ENSPCOG00000025260	-	76	100.000	Propithecus_coquereli
ENSTBEG00000013294	-	58	99.869	ENSPVAG00000005069	-	75	99.869	Pteropus_vampyrus
ENSTBEG00000013294	-	58	94.898	ENSPNYG00000022340	polr2a	77	94.898	Pundamilia_nyererei
ENSTBEG00000013294	-	58	94.898	ENSPNAG00000011237	polr2a	74	94.898	Pygocentrus_nattereri
ENSTBEG00000013294	-	58	100.000	ENSRNOG00000028834	Polr2a	74	100.000	Rattus_norvegicus
ENSTBEG00000013294	-	58	99.869	ENSRBIG00000002471	-	75	99.869	Rhinopithecus_bieti
ENSTBEG00000013294	-	58	99.869	ENSRROG00000029583	-	74	99.869	Rhinopithecus_roxellana
ENSTBEG00000013294	-	51	54.593	YDL140C	RPO21	69	80.000	Saccharomyces_cerevisiae
ENSTBEG00000013294	-	58	100.000	ENSSBOG00000000808	-	76	100.000	Saimiri_boliviensis_boliviensis
ENSTBEG00000013294	-	58	99.441	ENSSHAG00000002858	-	74	99.441	Sarcophilus_harrisii
ENSTBEG00000013294	-	58	95.918	ENSSFOG00015023275	polr2a	76	95.918	Scleropages_formosus
ENSTBEG00000013294	-	58	94.898	ENSSMAG00000009137	polr2a	74	94.898	Scophthalmus_maximus
ENSTBEG00000013294	-	58	94.898	ENSSDUG00000020466	polr2a	76	94.898	Seriola_dumerili
ENSTBEG00000013294	-	58	94.898	ENSSLDG00000020613	polr2a	76	94.898	Seriola_lalandi_dorsalis
ENSTBEG00000013294	-	53	100.000	ENSSARG00000005875	-	70	100.000	Sorex_araneus
ENSTBEG00000013294	-	58	94.898	ENSSPAG00000016741	polr2a	69	94.898	Stegastes_partitus
ENSTBEG00000013294	-	58	100.000	ENSSSCG00000028278	-	75	100.000	Sus_scrofa
ENSTBEG00000013294	-	53	96.970	ENSTRUG00000012320	polr2a	56	96.970	Takifugu_rubripes
ENSTBEG00000013294	-	58	93.693	ENSTNIG00000010136	polr2a	71	93.693	Tetraodon_nigroviridis
ENSTBEG00000013294	-	58	98.980	ENSTTRG00000014273	-	74	98.980	Tursiops_truncatus
ENSTBEG00000013294	-	58	100.000	ENSUAMG00000014866	-	75	100.000	Ursus_americanus
ENSTBEG00000013294	-	58	100.000	ENSUMAG00000015732	-	85	100.000	Ursus_maritimus
ENSTBEG00000013294	-	58	100.000	ENSVVUG00000027878	-	74	100.000	Vulpes_vulpes
ENSTBEG00000013294	-	57	97.959	ENSXETG00000012465	polr2a	74	97.959	Xenopus_tropicalis
ENSTBEG00000013294	-	58	94.350	ENSXCOG00000001804	polr2a	74	94.350	Xiphophorus_couchianus
ENSTBEG00000013294	-	58	94.898	ENSXMAG00000015687	polr2a	76	94.898	Xiphophorus_maculatus