EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000013810 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 187457 bases
Position: chrGeneScaffold_2406:1746-189202
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000011995	PUF	PF00806.19	2.7e-25	1	3
ENSTBEP00000011995	PUF	PF00806.19	2.7e-25	2	3
ENSTBEP00000011995	PUF	PF00806.19	2.7e-25	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000013846	PUM1-201	3495	-	ENSTBEP00000011995	1165 (aa)	-	UPI0000F5EB78

Gene Model

Click here to download ENSTBEG00000013810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000013810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000013810	PUM1	58	87.805	ENSTBEG00000008729	PUM2	65	87.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000013810	PUM1	89	96.341	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSTBEG00000013810	PUM1	89	90.244	ENSAPOG00000021632	pum1	87	90.244	Acanthochromis_polyacanthus
ENSTBEG00000013810	PUM1	89	95.122	ENSAMEG00000017656	PUM1	85	95.122	Ailuropoda_melanoleuca
ENSTBEG00000013810	PUM1	89	89.024	ENSACIG00000021013	pum1	87	89.024	Amphilophus_citrinellus
ENSTBEG00000013810	PUM1	89	90.244	ENSAOCG00000003944	pum1	87	90.244	Amphiprion_ocellaris
ENSTBEG00000013810	PUM1	89	90.244	ENSAPEG00000014550	pum1	87	90.244	Amphiprion_percula
ENSTBEG00000013810	PUM1	89	90.244	ENSATEG00000016004	pum1	87	90.244	Anabas_testudineus
ENSTBEG00000013810	PUM1	89	93.902	ENSAPLG00000009351	PUM1	87	93.902	Anas_platyrhynchos
ENSTBEG00000013810	PUM1	89	93.902	ENSACAG00000000682	PUM1	86	93.902	Anolis_carolinensis
ENSTBEG00000013810	PUM1	89	96.341	ENSANAG00000027865	PUM1	93	96.341	Aotus_nancymaae
ENSTBEG00000013810	PUM1	78	90.244	ENSACLG00000019354	pum1	86	90.244	Astatotilapia_calliptera
ENSTBEG00000013810	PUM1	88	95.122	ENSBTAG00000018979	PUM1	84	100.000	Bos_taurus
ENSTBEG00000013810	PUM1	89	96.341	ENSCJAG00000006035	PUM1	93	96.341	Callithrix_jacchus
ENSTBEG00000013810	PUM1	89	95.122	ENSCAFG00000011205	PUM1	87	95.122	Canis_familiaris
ENSTBEG00000013810	PUM1	79	95.122	ENSCAFG00020024616	PUM1	86	95.122	Canis_lupus_dingo
ENSTBEG00000013810	PUM1	89	95.122	ENSCHIG00000012952	PUM1	93	95.122	Capra_hircus
ENSTBEG00000013810	PUM1	89	96.341	ENSTSYG00000008868	PUM1	90	96.341	Carlito_syrichta
ENSTBEG00000013810	PUM1	89	96.341	ENSCPOG00000031613	PUM1	87	96.341	Cavia_porcellus
ENSTBEG00000013810	PUM1	89	96.341	ENSCATG00000017991	PUM1	84	100.000	Cercocebus_atys
ENSTBEG00000013810	PUM1	89	96.341	ENSCLAG00000007662	PUM1	93	96.341	Chinchilla_lanigera
ENSTBEG00000013810	PUM1	89	96.341	ENSCSAG00000001028	PUM1	87	96.341	Chlorocebus_sabaeus
ENSTBEG00000013810	PUM1	82	93.983	ENSCHOG00000010245	PUM1	80	93.983	Choloepus_hoffmanni
ENSTBEG00000013810	PUM1	89	93.902	ENSCPBG00000009288	PUM1	86	94.540	Chrysemys_picta_bellii
ENSTBEG00000013810	PUM1	89	96.341	ENSCANG00000042606	PUM1	93	96.341	Colobus_angolensis_palliatus
ENSTBEG00000013810	PUM1	88	96.341	ENSCGRG00001024949	Pum1	87	96.341	Cricetulus_griseus_chok1gshd
ENSTBEG00000013810	PUM1	88	96.341	ENSCGRG00000014197	Pum1	87	96.341	Cricetulus_griseus_crigri
ENSTBEG00000013810	PUM1	78	90.244	ENSCSEG00000015981	pum1	85	90.244	Cynoglossus_semilaevis
ENSTBEG00000013810	PUM1	89	89.024	ENSCVAG00000007043	pum1	87	89.024	Cyprinodon_variegatus
ENSTBEG00000013810	PUM1	89	89.024	ENSDARG00000099256	pum1	91	89.024	Danio_rerio
ENSTBEG00000013810	PUM1	89	93.914	ENSDNOG00000010939	PUM1	87	93.914	Dasypus_novemcinctus
ENSTBEG00000013810	PUM1	71	96.341	ENSDORG00000001875	Pum1	84	96.341	Dipodomys_ordii
ENSTBEG00000013810	PUM1	73	92.911	ENSETEG00000004355	PUM1	72	92.911	Echinops_telfairi
ENSTBEG00000013810	PUM1	89	95.122	ENSEASG00005010813	PUM1	87	95.122	Equus_asinus_asinus
ENSTBEG00000013810	PUM1	89	95.122	ENSECAG00000021369	PUM1	87	95.122	Equus_caballus
ENSTBEG00000013810	PUM1	65	98.993	ENSEEUG00000003871	PUM1	62	98.993	Erinaceus_europaeus
ENSTBEG00000013810	PUM1	89	87.805	ENSELUG00000002409	pum1	87	87.805	Esox_lucius
ENSTBEG00000013810	PUM1	89	95.122	ENSFCAG00000010374	PUM1	90	95.122	Felis_catus
ENSTBEG00000013810	PUM1	89	93.902	ENSFALG00000001214	PUM1	85	93.902	Ficedula_albicollis
ENSTBEG00000013810	PUM1	89	96.341	ENSFDAG00000011319	PUM1	87	96.341	Fukomys_damarensis
ENSTBEG00000013810	PUM1	58	90.244	ENSGMOG00000010491	pum1	55	90.244	Gadus_morhua
ENSTBEG00000013810	PUM1	89	93.902	ENSGALG00000042598	PUM1	90	93.902	Gallus_gallus
ENSTBEG00000013810	PUM1	89	89.024	ENSGAFG00000015617	pum1	87	89.024	Gambusia_affinis
ENSTBEG00000013810	PUM1	89	89.024	ENSGACG00000005717	pum1	87	89.024	Gasterosteus_aculeatus
ENSTBEG00000013810	PUM1	89	93.902	ENSGAGG00000001290	PUM1	87	93.902	Gopherus_agassizii
ENSTBEG00000013810	PUM1	89	96.341	ENSGGOG00000011983	PUM1	93	96.341	Gorilla_gorilla
ENSTBEG00000013810	PUM1	89	90.244	ENSHBUG00000018718	pum1	87	90.244	Haplochromis_burtoni
ENSTBEG00000013810	PUM1	89	96.341	ENSHGLG00000013819	Pum1	87	96.341	Heterocephalus_glaber_female
ENSTBEG00000013810	PUM1	89	96.341	ENSHGLG00100008621	Pum1	87	96.341	Heterocephalus_glaber_male
ENSTBEG00000013810	PUM1	78	89.024	ENSHCOG00000005149	pum1	85	89.024	Hippocampus_comes
ENSTBEG00000013810	PUM1	89	89.024	ENSIPUG00000020421	pum1	87	89.024	Ictalurus_punctatus
ENSTBEG00000013810	PUM1	89	96.341	ENSSTOG00000010757	PUM1	84	100.000	Ictidomys_tridecemlineatus
ENSTBEG00000013810	PUM1	89	96.341	ENSJJAG00000000530	Pum1	84	100.000	Jaculus_jaculus
ENSTBEG00000013810	PUM1	89	89.024	ENSKMAG00000003481	pum1	87	89.024	Kryptolebias_marmoratus
ENSTBEG00000013810	PUM1	89	90.244	ENSLBEG00000002527	pum1	87	90.244	Labrus_bergylta
ENSTBEG00000013810	PUM1	89	93.902	ENSLACG00000017188	PUM1	87	93.902	Latimeria_chalumnae
ENSTBEG00000013810	PUM1	89	93.902	ENSLOCG00000005210	pum1	87	93.902	Lepisosteus_oculatus
ENSTBEG00000013810	PUM1	89	95.122	ENSLAFG00000003178	PUM1	87	95.122	Loxodonta_africana
ENSTBEG00000013810	PUM1	89	96.341	ENSMFAG00000010291	PUM1	84	100.000	Macaca_fascicularis
ENSTBEG00000013810	PUM1	89	96.341	ENSMMUG00000013520	PUM1	93	96.341	Macaca_mulatta
ENSTBEG00000013810	PUM1	89	96.341	ENSMNEG00000034639	PUM1	93	96.341	Macaca_nemestrina
ENSTBEG00000013810	PUM1	89	96.341	ENSMLEG00000038743	PUM1	93	96.341	Mandrillus_leucophaeus
ENSTBEG00000013810	PUM1	89	90.244	ENSMAMG00000011606	pum1	97	90.244	Mastacembelus_armatus
ENSTBEG00000013810	PUM1	89	90.244	ENSMZEG00005005834	pum1	89	90.244	Maylandia_zebra
ENSTBEG00000013810	PUM1	89	93.902	ENSMGAG00000000724	PUM1	87	93.902	Meleagris_gallopavo
ENSTBEG00000013810	PUM1	89	96.341	ENSMAUG00000022090	Pum1	87	96.341	Mesocricetus_auratus
ENSTBEG00000013810	PUM1	89	95.122	ENSMICG00000012213	-	86	95.671	Microcebus_murinus
ENSTBEG00000013810	PUM1	89	95.122	ENSMICG00000007713	-	93	95.122	Microcebus_murinus
ENSTBEG00000013810	PUM1	89	96.341	ENSMOCG00000015463	Pum1	87	96.341	Microtus_ochrogaster
ENSTBEG00000013810	PUM1	71	89.024	ENSMMOG00000019817	pum1	72	89.024	Mola_mola
ENSTBEG00000013810	PUM1	89	93.902	ENSMODG00000017067	PUM1	87	93.902	Monodelphis_domestica
ENSTBEG00000013810	PUM1	71	90.244	ENSMALG00000016399	pum1	74	90.244	Monopterus_albus
ENSTBEG00000013810	PUM1	89	96.341	MGP_CAROLIEiJ_G0026549	Pum1	87	96.341	Mus_caroli
ENSTBEG00000013810	PUM1	89	96.341	ENSMUSG00000028580	Pum1	87	96.341	Mus_musculus
ENSTBEG00000013810	PUM1	89	96.341	MGP_PahariEiJ_G0028881	Pum1	87	96.341	Mus_pahari
ENSTBEG00000013810	PUM1	89	96.341	MGP_SPRETEiJ_G0027529	Pum1	87	96.341	Mus_spretus
ENSTBEG00000013810	PUM1	89	95.122	ENSMPUG00000015454	PUM1	87	95.122	Mustela_putorius_furo
ENSTBEG00000013810	PUM1	88	95.122	ENSMLUG00000006490	PUM1	87	95.122	Myotis_lucifugus
ENSTBEG00000013810	PUM1	89	96.341	ENSNGAG00000002378	Pum1	87	96.341	Nannospalax_galili
ENSTBEG00000013810	PUM1	68	90.244	ENSNBRG00000010689	pum1	83	90.244	Neolamprologus_brichardi
ENSTBEG00000013810	PUM1	89	96.341	ENSNLEG00000001151	PUM1	84	99.306	Nomascus_leucogenys
ENSTBEG00000013810	PUM1	63	100.000	ENSMEUG00000000976	-	63	95.973	Notamacropus_eugenii
ENSTBEG00000013810	PUM1	71	97.030	ENSOPRG00000001776	PUM1	70	97.030	Ochotona_princeps
ENSTBEG00000013810	PUM1	89	96.341	ENSODEG00000003465	PUM1	87	96.341	Octodon_degus
ENSTBEG00000013810	PUM1	89	90.244	ENSONIG00000002290	pum1	87	90.244	Oreochromis_niloticus
ENSTBEG00000013810	PUM1	71	89.231	ENSOANG00000004902	-	86	89.231	Ornithorhynchus_anatinus
ENSTBEG00000013810	PUM1	88	96.341	ENSOCUG00000008641	PUM1	87	96.341	Oryctolagus_cuniculus
ENSTBEG00000013810	PUM1	89	90.244	ENSORLG00000011482	pum1	87	90.244	Oryzias_latipes
ENSTBEG00000013810	PUM1	89	90.244	ENSORLG00020019461	pum1	87	90.244	Oryzias_latipes_hni
ENSTBEG00000013810	PUM1	89	90.244	ENSORLG00015011375	pum1	87	90.244	Oryzias_latipes_hsok
ENSTBEG00000013810	PUM1	56	89.024	ENSOMEG00000009312	pum1	65	89.024	Oryzias_melastigma
ENSTBEG00000013810	PUM1	89	96.341	ENSOGAG00000011063	PUM1	87	96.341	Otolemur_garnettii
ENSTBEG00000013810	PUM1	89	95.122	ENSOARG00000001899	PUM1	93	95.122	Ovis_aries
ENSTBEG00000013810	PUM1	89	96.341	ENSPPAG00000044003	PUM1	93	96.341	Pan_paniscus
ENSTBEG00000013810	PUM1	89	95.122	ENSPPRG00000001370	PUM1	84	100.000	Panthera_pardus
ENSTBEG00000013810	PUM1	89	95.122	ENSPTIG00000010798	PUM1	84	100.000	Panthera_tigris_altaica
ENSTBEG00000013810	PUM1	89	96.341	ENSPTRG00000000453	PUM1	93	96.341	Pan_troglodytes
ENSTBEG00000013810	PUM1	89	96.341	ENSPANG00000016338	PUM1	84	100.000	Papio_anubis
ENSTBEG00000013810	PUM1	89	93.902	ENSPSIG00000014118	PUM1	87	93.902	Pelodiscus_sinensis
ENSTBEG00000013810	PUM1	68	91.463	ENSPMGG00000005836	pum1	83	91.463	Periophthalmus_magnuspinnatus
ENSTBEG00000013810	PUM1	89	96.341	ENSPEMG00000010009	Pum1	87	96.341	Peromyscus_maniculatus_bairdii
ENSTBEG00000013810	PUM1	89	93.902	ENSPCIG00000014151	PUM1	90	93.902	Phascolarctos_cinereus
ENSTBEG00000013810	PUM1	83	89.024	ENSPFOG00000007289	pum1	86	89.024	Poecilia_formosa
ENSTBEG00000013810	PUM1	89	89.024	ENSPLAG00000007256	pum1	87	89.024	Poecilia_latipinna
ENSTBEG00000013810	PUM1	78	89.024	ENSPMEG00000019543	pum1	85	89.024	Poecilia_mexicana
ENSTBEG00000013810	PUM1	89	89.024	ENSPREG00000005195	pum1	87	89.024	Poecilia_reticulata
ENSTBEG00000013810	PUM1	89	96.341	ENSPPYG00000001621	PUM1	87	96.341	Pongo_abelii
ENSTBEG00000013810	PUM1	63	99.174	ENSPCAG00000001979	PUM1	60	99.194	Procavia_capensis
ENSTBEG00000013810	PUM1	89	95.122	ENSPCOG00000004398	PUM1	93	95.122	Propithecus_coquereli
ENSTBEG00000013810	PUM1	87	94.241	ENSPVAG00000005207	PUM1	83	94.241	Pteropus_vampyrus
ENSTBEG00000013810	PUM1	89	90.244	ENSPNYG00000009518	pum1	87	90.244	Pundamilia_nyererei
ENSTBEG00000013810	PUM1	89	89.024	ENSPNAG00000026728	pum1	87	89.024	Pygocentrus_nattereri
ENSTBEG00000013810	PUM1	88	96.341	ENSRNOG00000011709	Pum1	87	96.341	Rattus_norvegicus
ENSTBEG00000013810	PUM1	89	96.341	ENSRBIG00000042521	PUM1	84	100.000	Rhinopithecus_bieti
ENSTBEG00000013810	PUM1	89	96.341	ENSRROG00000020156	PUM1	93	96.341	Rhinopithecus_roxellana
ENSTBEG00000013810	PUM1	89	96.341	ENSSBOG00000032037	PUM1	93	96.341	Saimiri_boliviensis_boliviensis
ENSTBEG00000013810	PUM1	89	93.902	ENSSHAG00000010918	PUM1	87	93.902	Sarcophilus_harrisii
ENSTBEG00000013810	PUM1	89	90.244	ENSSMAG00000010918	pum1	87	90.244	Scophthalmus_maximus
ENSTBEG00000013810	PUM1	89	90.244	ENSSDUG00000009021	pum1	87	90.244	Seriola_dumerili
ENSTBEG00000013810	PUM1	84	90.244	ENSSLDG00000009667	pum1	86	90.244	Seriola_lalandi_dorsalis
ENSTBEG00000013810	PUM1	83	99.558	ENSSARG00000003055	PUM1	79	99.563	Sorex_araneus
ENSTBEG00000013810	PUM1	89	93.902	ENSSPUG00000006267	PUM1	87	93.902	Sphenodon_punctatus
ENSTBEG00000013810	PUM1	89	90.244	ENSSPAG00000016636	pum1	87	90.244	Stegastes_partitus
ENSTBEG00000013810	PUM1	89	95.122	ENSSSCG00000003591	PUM1	90	95.122	Sus_scrofa
ENSTBEG00000013810	PUM1	89	90.244	ENSTRUG00000013121	pum1	87	90.244	Takifugu_rubripes
ENSTBEG00000013810	PUM1	89	90.244	ENSTNIG00000016983	pum1	87	90.244	Tetraodon_nigroviridis
ENSTBEG00000013810	PUM1	80	95.122	ENSTTRG00000007436	PUM1	76	95.122	Tursiops_truncatus
ENSTBEG00000013810	PUM1	81	94.526	ENSUAMG00000018262	-	88	94.526	Ursus_americanus
ENSTBEG00000013810	PUM1	82	97.266	ENSUMAG00000009211	PUM1	90	97.266	Ursus_maritimus
ENSTBEG00000013810	PUM1	81	98.658	ENSVPAG00000005902	PUM1	80	98.658	Vicugna_pacos
ENSTBEG00000013810	PUM1	89	95.122	ENSVVUG00000014631	PUM1	86	97.126	Vulpes_vulpes
ENSTBEG00000013810	PUM1	89	93.902	ENSXETG00000012904	pum1	87	93.902	Xenopus_tropicalis
ENSTBEG00000013810	PUM1	89	89.024	ENSXMAG00000002945	pum1	87	89.024	Xiphophorus_maculatus