EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000014965 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 60043 bases
Position: chrGeneScaffold_1549:110243-170285
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000013016	Ago_hook	PF10427.9	7.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000014994	TNRC6A-201	5745	-	ENSTBEP00000013016	1914 (aa)	-	UPI0000F60376

Gene Model

Click here to download ENSTBEG00000014965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000014965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000014965	TNRC6A	52	42.424	ENSTBEG00000005046	TNRC6C	84	43.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000014965	TNRC6A	100	94.575	ENSG00000090905	TNRC6A	100	93.125	Homo_sapiens
ENSTBEG00000014965	TNRC6A	100	93.626	ENSAMEG00000009333	TNRC6A	100	93.521	Ailuropoda_melanoleuca
ENSTBEG00000014965	TNRC6A	99	79.729	ENSAPLG00000009978	TNRC6A	100	79.729	Anas_platyrhynchos
ENSTBEG00000014965	TNRC6A	96	53.151	ENSACAG00000011857	TNRC6A	97	53.915	Anolis_carolinensis
ENSTBEG00000014965	TNRC6A	100	94.465	ENSANAG00000025252	TNRC6A	98	94.465	Aotus_nancymaae
ENSTBEG00000014965	TNRC6A	93	54.698	ENSAMXG00000019919	tnrc6a	99	54.324	Astyanax_mexicanus
ENSTBEG00000014965	TNRC6A	99	92.449	ENSBTAG00000017999	TNRC6A	99	92.082	Bos_taurus
ENSTBEG00000014965	TNRC6A	99	93.906	ENSCJAG00000020677	TNRC6A	98	93.961	Callithrix_jacchus
ENSTBEG00000014965	TNRC6A	99	93.832	ENSCAFG00000017531	TNRC6A	98	93.887	Canis_familiaris
ENSTBEG00000014965	TNRC6A	99	92.719	ENSCAFG00020021160	TNRC6A	99	92.771	Canis_lupus_dingo
ENSTBEG00000014965	TNRC6A	100	89.446	ENSCHIG00000019448	TNRC6A	99	89.133	Capra_hircus
ENSTBEG00000014965	TNRC6A	100	94.465	ENSTSYG00000012711	TNRC6A	99	94.444	Carlito_syrichta
ENSTBEG00000014965	TNRC6A	99	91.270	ENSCPOG00000036684	TNRC6A	98	91.327	Cavia_porcellus
ENSTBEG00000014965	TNRC6A	100	94.569	ENSCCAG00000033664	TNRC6A	99	94.093	Cebus_capucinus
ENSTBEG00000014965	TNRC6A	99	92.820	ENSCATG00000019284	TNRC6A	97	92.872	Cercocebus_atys
ENSTBEG00000014965	TNRC6A	99	86.722	ENSCLAG00000010217	TNRC6A	98	86.625	Chinchilla_lanigera
ENSTBEG00000014965	TNRC6A	100	94.566	ENSCSAG00000006561	TNRC6A	98	94.566	Chlorocebus_sabaeus
ENSTBEG00000014965	TNRC6A	90	98.860	ENSCHOG00000009374	TNRC6A	87	98.860	Choloepus_hoffmanni
ENSTBEG00000014965	TNRC6A	93	77.428	ENSCPBG00000001881	TNRC6A	99	77.485	Chrysemys_picta_bellii
ENSTBEG00000014965	TNRC6A	100	94.828	ENSCANG00000041549	TNRC6A	98	94.828	Colobus_angolensis_palliatus
ENSTBEG00000014965	TNRC6A	100	92.010	ENSCGRG00001015021	Tnrc6a	99	91.854	Cricetulus_griseus_chok1gshd
ENSTBEG00000014965	TNRC6A	99	88.941	ENSCGRG00000013351	Tnrc6a	97	88.836	Cricetulus_griseus_crigri
ENSTBEG00000014965	TNRC6A	93	54.788	ENSDARG00000079688	tnrc6a	99	54.600	Danio_rerio
ENSTBEG00000014965	TNRC6A	99	91.554	ENSDNOG00000013989	TNRC6A	99	91.506	Dasypus_novemcinctus
ENSTBEG00000014965	TNRC6A	99	87.768	ENSETEG00000014658	TNRC6A	99	87.774	Echinops_telfairi
ENSTBEG00000014965	TNRC6A	100	94.099	ENSEASG00005017693	TNRC6A	99	93.979	Equus_asinus_asinus
ENSTBEG00000014965	TNRC6A	100	94.099	ENSECAG00000025056	TNRC6A	99	94.099	Equus_caballus
ENSTBEG00000014965	TNRC6A	99	87.258	ENSEEUG00000004530	TNRC6A	99	87.317	Erinaceus_europaeus
ENSTBEG00000014965	TNRC6A	99	92.420	ENSFCAG00000025236	TNRC6A	99	92.424	Felis_catus
ENSTBEG00000014965	TNRC6A	99	77.503	ENSFALG00000003757	TNRC6A	97	77.577	Ficedula_albicollis
ENSTBEG00000014965	TNRC6A	93	77.971	ENSGALG00000006068	TNRC6A	99	78.083	Gallus_gallus
ENSTBEG00000014965	TNRC6A	93	76.902	ENSGAGG00000023209	TNRC6A	99	76.957	Gopherus_agassizii
ENSTBEG00000014965	TNRC6A	100	94.621	ENSGGOG00000005137	TNRC6A	99	94.357	Gorilla_gorilla
ENSTBEG00000014965	TNRC6A	96	71.024	ENSHGLG00000007368	-	93	70.806	Heterocephalus_glaber_female
ENSTBEG00000014965	TNRC6A	99	89.648	ENSHGLG00000012474	-	97	89.753	Heterocephalus_glaber_female
ENSTBEG00000014965	TNRC6A	99	89.205	ENSHGLG00100012496	-	97	89.258	Heterocephalus_glaber_male
ENSTBEG00000014965	TNRC6A	99	93.740	ENSSTOG00000023394	TNRC6A	96	93.796	Ictidomys_tridecemlineatus
ENSTBEG00000014965	TNRC6A	99	67.509	ENSLACG00000006277	TNRC6A	100	67.973	Latimeria_chalumnae
ENSTBEG00000014965	TNRC6A	98	83.457	ENSLOCG00000005517	tnrc6a	88	83.457	Lepisosteus_oculatus
ENSTBEG00000014965	TNRC6A	100	89.608	ENSLAFG00000004209	TNRC6A	100	89.713	Loxodonta_africana
ENSTBEG00000014965	TNRC6A	99	92.872	ENSMFAG00000003824	TNRC6A	99	92.924	Macaca_fascicularis
ENSTBEG00000014965	TNRC6A	100	94.569	ENSMMUG00000020428	TNRC6A	98	94.569	Macaca_mulatta
ENSTBEG00000014965	TNRC6A	100	94.430	ENSMNEG00000034854	TNRC6A	98	94.430	Macaca_nemestrina
ENSTBEG00000014965	TNRC6A	99	92.579	ENSMLEG00000042737	TNRC6A	97	92.320	Mandrillus_leucophaeus
ENSTBEG00000014965	TNRC6A	99	77.991	ENSMGAG00000006455	TNRC6A	93	80.216	Meleagris_gallopavo
ENSTBEG00000014965	TNRC6A	99	89.498	ENSMAUG00000012750	Tnrc6a	98	89.295	Mesocricetus_auratus
ENSTBEG00000014965	TNRC6A	100	95.509	ENSMICG00000030685	TNRC6A	99	95.246	Microcebus_murinus
ENSTBEG00000014965	TNRC6A	99	89.807	ENSMOCG00000000152	Tnrc6a	98	89.603	Microtus_ochrogaster
ENSTBEG00000014965	TNRC6A	99	79.694	ENSMODG00000016348	TNRC6A	96	79.755	Monodelphis_domestica
ENSTBEG00000014965	TNRC6A	99	88.343	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	91.422	Mus_caroli
ENSTBEG00000014965	TNRC6A	99	88.918	ENSMUSG00000052707	Tnrc6a	99	91.851	Mus_musculus
ENSTBEG00000014965	TNRC6A	99	89.133	MGP_PahariEiJ_G0013635	Tnrc6a	100	92.137	Mus_pahari
ENSTBEG00000014965	TNRC6A	99	91.323	MGP_SPRETEiJ_G0031539	Tnrc6a	100	91.851	Mus_spretus
ENSTBEG00000014965	TNRC6A	99	81.404	ENSMPUG00000012324	TNRC6A	100	81.351	Mustela_putorius_furo
ENSTBEG00000014965	TNRC6A	99	90.614	ENSMLUG00000002701	TNRC6A	100	90.561	Myotis_lucifugus
ENSTBEG00000014965	TNRC6A	99	90.909	ENSNGAG00000020702	Tnrc6a	98	90.862	Nannospalax_galili
ENSTBEG00000014965	TNRC6A	99	91.693	ENSNLEG00000011851	TNRC6A	98	91.796	Nomascus_leucogenys
ENSTBEG00000014965	TNRC6A	76	83.832	ENSMEUG00000015959	-	74	83.832	Notamacropus_eugenii
ENSTBEG00000014965	TNRC6A	95	99.248	ENSOPRG00000005819	TNRC6A	93	99.248	Ochotona_princeps
ENSTBEG00000014965	TNRC6A	99	84.934	ENSODEG00000012802	TNRC6A	98	84.716	Octodon_degus
ENSTBEG00000014965	TNRC6A	89	80.243	ENSOANG00000007672	TNRC6A	99	80.222	Ornithorhynchus_anatinus
ENSTBEG00000014965	TNRC6A	99	90.776	ENSOCUG00000004325	TNRC6A	100	90.723	Oryctolagus_cuniculus
ENSTBEG00000014965	TNRC6A	100	94.676	ENSOGAG00000006666	TNRC6A	98	94.676	Otolemur_garnettii
ENSTBEG00000014965	TNRC6A	99	91.567	ENSOARG00000017950	TNRC6A	99	91.207	Ovis_aries
ENSTBEG00000014965	TNRC6A	100	94.531	ENSPPAG00000028379	TNRC6A	99	94.268	Pan_paniscus
ENSTBEG00000014965	TNRC6A	99	92.420	ENSPPRG00000005861	TNRC6A	98	92.424	Panthera_pardus
ENSTBEG00000014965	TNRC6A	99	91.488	ENSPTIG00000006346	TNRC6A	98	91.545	Panthera_tigris_altaica
ENSTBEG00000014965	TNRC6A	99	94.271	ENSPTRG00000007898	TNRC6A	99	94.271	Pan_troglodytes
ENSTBEG00000014965	TNRC6A	100	92.183	ENSPANG00000018523	TNRC6A	98	92.183	Papio_anubis
ENSTBEG00000014965	TNRC6A	87	83.212	ENSPKIG00000012859	tnrc6a	93	83.212	Paramormyrops_kingsleyae
ENSTBEG00000014965	TNRC6A	79	72.335	ENSPSIG00000003965	TNRC6A	100	72.400	Pelodiscus_sinensis
ENSTBEG00000014965	TNRC6A	99	89.911	ENSPEMG00000016318	Tnrc6a	98	89.603	Peromyscus_maniculatus_bairdii
ENSTBEG00000014965	TNRC6A	99	80.773	ENSPCIG00000012106	TNRC6A	100	80.930	Phascolarctos_cinereus
ENSTBEG00000014965	TNRC6A	100	94.158	ENSPPYG00000007202	TNRC6A	98	94.158	Pongo_abelii
ENSTBEG00000014965	TNRC6A	90	100.000	ENSPCAG00000008260	TNRC6A	87	100.000	Procavia_capensis
ENSTBEG00000014965	TNRC6A	100	95.350	ENSPCOG00000010134	TNRC6A	98	95.350	Propithecus_coquereli
ENSTBEG00000014965	TNRC6A	89	69.014	ENSPVAG00000012066	TNRC6A	97	69.014	Pteropus_vampyrus
ENSTBEG00000014965	TNRC6A	99	91.680	ENSRNOG00000024737	Tnrc6a	98	91.688	Rattus_norvegicus
ENSTBEG00000014965	TNRC6A	100	94.517	ENSRBIG00000014222	TNRC6A	99	94.517	Rhinopithecus_bieti
ENSTBEG00000014965	TNRC6A	100	94.566	ENSRROG00000032360	TNRC6A	98	94.566	Rhinopithecus_roxellana
ENSTBEG00000014965	TNRC6A	100	93.521	ENSSBOG00000036197	TNRC6A	100	94.675	Saimiri_boliviensis_boliviensis
ENSTBEG00000014965	TNRC6A	93	79.157	ENSSHAG00000008811	TNRC6A	99	81.777	Sarcophilus_harrisii
ENSTBEG00000014965	TNRC6A	90	82.716	ENSSFOG00015008920	tnrc6a	93	82.716	Scleropages_formosus
ENSTBEG00000014965	TNRC6A	74	91.486	ENSSARG00000002479	TNRC6A	89	91.848	Sorex_araneus
ENSTBEG00000014965	TNRC6A	92	75.812	ENSSPUG00000010525	TNRC6A	100	75.980	Sphenodon_punctatus
ENSTBEG00000014965	TNRC6A	99	90.975	ENSSSCG00000038870	TNRC6A	100	94.675	Sus_scrofa
ENSTBEG00000014965	TNRC6A	99	75.950	ENSTGUG00000006142	TNRC6A	97	76.106	Taeniopygia_guttata
ENSTBEG00000014965	TNRC6A	94	92.988	ENSTTRG00000002008	TNRC6A	90	92.988	Tursiops_truncatus
ENSTBEG00000014965	TNRC6A	81	89.325	ENSUAMG00000006656	-	93	89.389	Ursus_americanus
ENSTBEG00000014965	TNRC6A	99	93.711	ENSUMAG00000008274	TNRC6A	99	93.711	Ursus_maritimus
ENSTBEG00000014965	TNRC6A	57	80.066	ENSVPAG00000010764	-	55	80.066	Vicugna_pacos
ENSTBEG00000014965	TNRC6A	95	100.000	ENSVVUG00000005380	TNRC6A	99	93.783	Vulpes_vulpes
ENSTBEG00000014965	TNRC6A	96	63.568	ENSXETG00000030437	TNRC6A	99	63.774	Xenopus_tropicalis