EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000014973 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 122504 bases
Position: chrGeneScaffold_918:85647-208150
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000013019	ResIII	PF04851.15	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000014997	SMARCA1-201	2988	-	ENSTBEP00000013019	995 (aa)	-	UPI0000F5EE17

Gene Model

Click here to download ENSTBEG00000014973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000014973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000014973	SMARCA1	100	91.365	ENSG00000102038	SMARCA1	94	91.365	Homo_sapiens
ENSTBEG00000014973	SMARCA1	89	82.638	ENSAPOG00000016035	smarca5	96	82.594	Acanthochromis_polyacanthus
ENSTBEG00000014973	SMARCA1	99	90.081	ENSAMEG00000015218	SMARCA1	92	90.091	Ailuropoda_melanoleuca
ENSTBEG00000014973	SMARCA1	88	82.648	ENSACIG00000016982	smarca5	97	82.579	Amphilophus_citrinellus
ENSTBEG00000014973	SMARCA1	89	82.638	ENSAOCG00000015578	smarca5	86	82.594	Amphiprion_ocellaris
ENSTBEG00000014973	SMARCA1	89	82.638	ENSAPEG00000011117	smarca5	95	83.942	Amphiprion_percula
ENSTBEG00000014973	SMARCA1	91	81.958	ENSATEG00000012894	smarca5	88	81.958	Anabas_testudineus
ENSTBEG00000014973	SMARCA1	89	90.981	ENSAPLG00000013149	SMARCA1	91	90.687	Anas_platyrhynchos
ENSTBEG00000014973	SMARCA1	99	85.020	ENSACAG00000011376	SMARCA1	93	85.020	Anolis_carolinensis
ENSTBEG00000014973	SMARCA1	99	85.729	ENSANAG00000023098	SMARCA1	92	85.743	Aotus_nancymaae
ENSTBEG00000014973	SMARCA1	89	82.864	ENSACLG00000025356	smarca5	86	82.816	Astatotilapia_calliptera
ENSTBEG00000014973	SMARCA1	91	86.813	ENSAMXG00000011227	smarca1	98	88.313	Astyanax_mexicanus
ENSTBEG00000014973	SMARCA1	91	82.359	ENSAMXG00000005709	smarca5	87	82.359	Astyanax_mexicanus
ENSTBEG00000014973	SMARCA1	99	91.010	ENSBTAG00000002292	SMARCA1	94	91.010	Bos_taurus
ENSTBEG00000014973	SMARCA1	90	63.895	WBGene00002169	isw-1	89	63.895	Caenorhabditis_elegans
ENSTBEG00000014973	SMARCA1	99	91.102	ENSCJAG00000002868	SMARCA1	92	91.102	Callithrix_jacchus
ENSTBEG00000014973	SMARCA1	99	80.684	ENSCAFG00000018673	SMARCA1	95	86.424	Canis_familiaris
ENSTBEG00000014973	SMARCA1	99	90.192	ENSCAFG00020001751	SMARCA1	92	90.192	Canis_lupus_dingo
ENSTBEG00000014973	SMARCA1	100	91.165	ENSCHIG00000009837	SMARCA1	94	91.165	Capra_hircus
ENSTBEG00000014973	SMARCA1	99	91.304	ENSTSYG00000004240	SMARCA1	90	96.048	Carlito_syrichta
ENSTBEG00000014973	SMARCA1	100	90.863	ENSCPOG00000013601	SMARCA1	95	90.863	Cavia_porcellus
ENSTBEG00000014973	SMARCA1	99	87.867	ENSCCAG00000030817	SMARCA1	92	87.867	Cebus_capucinus
ENSTBEG00000014973	SMARCA1	99	91.304	ENSCATG00000015921	SMARCA1	94	90.261	Cercocebus_atys
ENSTBEG00000014973	SMARCA1	99	90.653	ENSCLAG00000002171	SMARCA1	94	90.663	Chinchilla_lanigera
ENSTBEG00000014973	SMARCA1	99	90.091	ENSCSAG00000008460	SMARCA1	92	90.091	Chlorocebus_sabaeus
ENSTBEG00000014973	SMARCA1	93	91.549	ENSCPBG00000001146	SMARCA1	92	91.549	Chrysemys_picta_bellii
ENSTBEG00000014973	SMARCA1	90	73.884	ENSCING00000004110	swi/snf	87	73.884	Ciona_intestinalis
ENSTBEG00000014973	SMARCA1	90	73.422	ENSCSAVG00000004620	-	100	71.978	Ciona_savignyi
ENSTBEG00000014973	SMARCA1	99	91.203	ENSCANG00000007183	SMARCA1	92	91.203	Colobus_angolensis_palliatus
ENSTBEG00000014973	SMARCA1	99	89.648	ENSCGRG00001010776	Smarca1	94	89.659	Cricetulus_griseus_chok1gshd
ENSTBEG00000014973	SMARCA1	100	89.458	ENSCGRG00000015301	Smarca1	99	89.458	Cricetulus_griseus_crigri
ENSTBEG00000014973	SMARCA1	91	82.099	ENSCSEG00000000328	smarca5	86	82.262	Cynoglossus_semilaevis
ENSTBEG00000014973	SMARCA1	89	82.300	ENSCVAG00000008668	smarca5	95	83.333	Cyprinodon_variegatus
ENSTBEG00000014973	SMARCA1	90	84.957	ENSDARG00000012776	smarca1	88	84.957	Danio_rerio
ENSTBEG00000014973	SMARCA1	89	82.731	ENSDARG00000052348	smarca5	86	82.575	Danio_rerio
ENSTBEG00000014973	SMARCA1	99	88.283	ENSDNOG00000004315	SMARCA1	94	88.283	Dasypus_novemcinctus
ENSTBEG00000014973	SMARCA1	100	89.157	ENSDORG00000009270	Smarca1	95	89.157	Dipodomys_ordii
ENSTBEG00000014973	SMARCA1	89	74.103	FBgn0011604	Iswi	88	73.581	Drosophila_melanogaster
ENSTBEG00000014973	SMARCA1	77	92.857	ENSETEG00000017426	SMARCA1	79	92.857	Echinops_telfairi
ENSTBEG00000014973	SMARCA1	88	80.227	ENSEBUG00000001239	smarca5	89	79.538	Eptatretus_burgeri
ENSTBEG00000014973	SMARCA1	92	93.498	ENSEASG00005008218	SMARCA1	91	93.498	Equus_asinus_asinus
ENSTBEG00000014973	SMARCA1	99	90.091	ENSECAG00000012106	SMARCA1	92	90.091	Equus_caballus
ENSTBEG00000014973	SMARCA1	76	93.089	ENSEEUG00000014927	SMARCA1	78	93.089	Erinaceus_europaeus
ENSTBEG00000014973	SMARCA1	97	80.821	ENSELUG00000010515	smarca1	96	80.564	Esox_lucius
ENSTBEG00000014973	SMARCA1	99	91.304	ENSFCAG00000018496	SMARCA1	93	91.304	Felis_catus
ENSTBEG00000014973	SMARCA1	87	90.438	ENSFALG00000000209	SMARCA1	92	90.438	Ficedula_albicollis
ENSTBEG00000014973	SMARCA1	100	90.964	ENSFDAG00000009818	SMARCA1	98	90.964	Fukomys_damarensis
ENSTBEG00000014973	SMARCA1	89	82.751	ENSFHEG00000007687	smarca5	91	82.814	Fundulus_heteroclitus
ENSTBEG00000014973	SMARCA1	98	85.082	ENSGALG00000008431	SMARCA1	97	84.747	Gallus_gallus
ENSTBEG00000014973	SMARCA1	89	82.525	ENSGAFG00000017731	smarca5	86	82.373	Gambusia_affinis
ENSTBEG00000014973	SMARCA1	91	90.919	ENSGAGG00000023575	SMARCA1	92	90.919	Gopherus_agassizii
ENSTBEG00000014973	SMARCA1	75	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSTBEG00000014973	SMARCA1	99	90.151	ENSHGLG00000003080	SMARCA1	94	90.161	Heterocephalus_glaber_female
ENSTBEG00000014973	SMARCA1	99	89.648	ENSHGLG00100001102	SMARCA1	99	89.558	Heterocephalus_glaber_male
ENSTBEG00000014973	SMARCA1	89	82.751	ENSHCOG00000005458	smarca5	86	82.705	Hippocampus_comes
ENSTBEG00000014973	SMARCA1	99	80.203	ENSIPUG00000016905	Smarca1	91	85.936	Ictalurus_punctatus
ENSTBEG00000014973	SMARCA1	89	82.619	ENSIPUG00000005229	SMARCA5	88	82.353	Ictalurus_punctatus
ENSTBEG00000014973	SMARCA1	100	91.064	ENSSTOG00000014524	SMARCA1	94	91.064	Ictidomys_tridecemlineatus
ENSTBEG00000014973	SMARCA1	100	88.956	ENSJJAG00000002593	Smarca1	95	88.956	Jaculus_jaculus
ENSTBEG00000014973	SMARCA1	89	82.751	ENSKMAG00000003777	smarca5	86	82.705	Kryptolebias_marmoratus
ENSTBEG00000014973	SMARCA1	87	82.468	ENSLBEG00000013295	SMARCA1	100	83.686	Labrus_bergylta
ENSTBEG00000014973	SMARCA1	89	82.413	ENSLBEG00000018112	smarca5	86	82.373	Labrus_bergylta
ENSTBEG00000014973	SMARCA1	99	83.249	ENSLACG00000016697	SMARCA1	96	83.249	Latimeria_chalumnae
ENSTBEG00000014973	SMARCA1	97	83.093	ENSLOCG00000014591	smarca1	95	82.895	Lepisosteus_oculatus
ENSTBEG00000014973	SMARCA1	91	94.801	ENSLAFG00000000896	SMARCA1	91	94.414	Loxodonta_africana
ENSTBEG00000014973	SMARCA1	99	91.304	ENSMFAG00000002117	SMARCA1	89	96.158	Macaca_fascicularis
ENSTBEG00000014973	SMARCA1	99	91.304	ENSMMUG00000008818	SMARCA1	93	95.604	Macaca_mulatta
ENSTBEG00000014973	SMARCA1	99	91.304	ENSMNEG00000041768	SMARCA1	89	96.158	Macaca_nemestrina
ENSTBEG00000014973	SMARCA1	99	91.203	ENSMLEG00000043198	SMARCA1	92	91.203	Mandrillus_leucophaeus
ENSTBEG00000014973	SMARCA1	89	82.864	ENSMAMG00000014294	smarca5	86	82.816	Mastacembelus_armatus
ENSTBEG00000014973	SMARCA1	89	82.864	ENSMZEG00005009369	smarca5	86	82.816	Maylandia_zebra
ENSTBEG00000014973	SMARCA1	98	85.185	ENSMGAG00000007042	SMARCA1	97	85.005	Meleagris_gallopavo
ENSTBEG00000014973	SMARCA1	100	90.261	ENSMAUG00000008133	Smarca1	94	90.261	Mesocricetus_auratus
ENSTBEG00000014973	SMARCA1	99	91.304	ENSMICG00000015768	SMARCA1	93	91.304	Microcebus_murinus
ENSTBEG00000014973	SMARCA1	100	90.060	ENSMOCG00000009464	Smarca1	94	90.060	Microtus_ochrogaster
ENSTBEG00000014973	SMARCA1	89	80.722	ENSMMOG00000005547	smarca5	89	80.710	Mola_mola
ENSTBEG00000014973	SMARCA1	91	90.618	ENSMODG00000013187	-	94	84.763	Monodelphis_domestica
ENSTBEG00000014973	SMARCA1	91	81.051	ENSMALG00000002081	smarca5	90	81.051	Monopterus_albus
ENSTBEG00000014973	SMARCA1	91	94.841	MGP_CAROLIEiJ_G0033034	Smarca1	86	94.841	Mus_caroli
ENSTBEG00000014973	SMARCA1	91	94.841	ENSMUSG00000031099	Smarca1	86	94.841	Mus_musculus
ENSTBEG00000014973	SMARCA1	91	94.731	MGP_PahariEiJ_G0031579	Smarca1	86	94.731	Mus_pahari
ENSTBEG00000014973	SMARCA1	91	94.841	MGP_SPRETEiJ_G0034192	Smarca1	86	94.841	Mus_spretus
ENSTBEG00000014973	SMARCA1	99	91.102	ENSMPUG00000017423	SMARCA1	87	91.102	Mustela_putorius_furo
ENSTBEG00000014973	SMARCA1	99	88.295	ENSMLUG00000029614	SMARCA1	93	88.295	Myotis_lucifugus
ENSTBEG00000014973	SMARCA1	100	91.064	ENSNGAG00000006492	Smarca1	94	91.064	Nannospalax_galili
ENSTBEG00000014973	SMARCA1	89	82.976	ENSNBRG00000004463	smarca5	89	82.927	Neolamprologus_brichardi
ENSTBEG00000014973	SMARCA1	99	90.495	ENSNLEG00000015179	SMARCA1	90	95.280	Nomascus_leucogenys
ENSTBEG00000014973	SMARCA1	96	75.945	ENSMEUG00000008819	SMARCA1	100	75.945	Notamacropus_eugenii
ENSTBEG00000014973	SMARCA1	100	90.462	ENSODEG00000012163	SMARCA1	95	90.462	Octodon_degus
ENSTBEG00000014973	SMARCA1	89	82.976	ENSONIG00000009993	smarca5	86	82.927	Oreochromis_niloticus
ENSTBEG00000014973	SMARCA1	91	91.372	ENSOANG00000002862	SMARCA1	92	91.372	Ornithorhynchus_anatinus
ENSTBEG00000014973	SMARCA1	99	88.979	ENSOCUG00000001047	SMARCA1	92	88.979	Oryctolagus_cuniculus
ENSTBEG00000014973	SMARCA1	89	82.413	ENSORLG00000021998	smarca5	86	82.373	Oryzias_latipes
ENSTBEG00000014973	SMARCA1	89	82.525	ENSORLG00020017679	smarca5	86	82.483	Oryzias_latipes_hni
ENSTBEG00000014973	SMARCA1	89	82.413	ENSORLG00015017210	smarca5	86	82.373	Oryzias_latipes_hsok
ENSTBEG00000014973	SMARCA1	89	82.413	ENSOMEG00000000086	smarca5	86	82.373	Oryzias_melastigma
ENSTBEG00000014973	SMARCA1	100	91.165	ENSOGAG00000004399	SMARCA1	94	91.165	Otolemur_garnettii
ENSTBEG00000014973	SMARCA1	99	89.798	ENSOARG00000014638	SMARCA1	98	89.798	Ovis_aries
ENSTBEG00000014973	SMARCA1	99	91.304	ENSPPAG00000034647	SMARCA1	92	91.304	Pan_paniscus
ENSTBEG00000014973	SMARCA1	99	91.304	ENSPPRG00000008929	SMARCA1	93	91.304	Panthera_pardus
ENSTBEG00000014973	SMARCA1	99	89.347	ENSPTIG00000000915	SMARCA1	96	89.347	Panthera_tigris_altaica
ENSTBEG00000014973	SMARCA1	99	91.304	ENSPTRG00000049876	SMARCA1	94	90.261	Pan_troglodytes
ENSTBEG00000014973	SMARCA1	99	91.304	ENSPANG00000003871	SMARCA1	92	91.304	Papio_anubis
ENSTBEG00000014973	SMARCA1	91	85.809	ENSPKIG00000013411	smarca1	91	85.809	Paramormyrops_kingsleyae
ENSTBEG00000014973	SMARCA1	99	85.628	ENSPSIG00000010101	SMARCA1	98	85.628	Pelodiscus_sinensis
ENSTBEG00000014973	SMARCA1	100	90.562	ENSPEMG00000017503	Smarca1	94	90.562	Peromyscus_maniculatus_bairdii
ENSTBEG00000014973	SMARCA1	99	85.282	ENSPCIG00000015460	SMARCA1	97	85.282	Phascolarctos_cinereus
ENSTBEG00000014973	SMARCA1	89	82.638	ENSPFOG00000007649	smarca5	86	82.483	Poecilia_formosa
ENSTBEG00000014973	SMARCA1	89	82.638	ENSPLAG00000003363	smarca5	86	82.483	Poecilia_latipinna
ENSTBEG00000014973	SMARCA1	89	82.525	ENSPMEG00000019849	smarca5	86	82.373	Poecilia_mexicana
ENSTBEG00000014973	SMARCA1	89	82.525	ENSPREG00000023250	smarca5	86	82.373	Poecilia_reticulata
ENSTBEG00000014973	SMARCA1	99	87.260	ENSPPYG00000020703	SMARCA1	92	87.260	Pongo_abelii
ENSTBEG00000014973	SMARCA1	77	90.909	ENSPCOG00000020722	SMARCA1	87	90.909	Propithecus_coquereli
ENSTBEG00000014973	SMARCA1	94	96.939	ENSPVAG00000003805	SMARCA1	89	96.939	Pteropus_vampyrus
ENSTBEG00000014973	SMARCA1	52	81.818	ENSPNYG00000012299	smarca5	80	81.818	Pundamilia_nyererei
ENSTBEG00000014973	SMARCA1	99	88.675	ENSRNOG00000003762	Smarca1	92	88.675	Rattus_norvegicus
ENSTBEG00000014973	SMARCA1	99	91.203	ENSRROG00000034167	SMARCA1	92	91.203	Rhinopithecus_roxellana
ENSTBEG00000014973	SMARCA1	99	91.203	ENSSBOG00000020641	SMARCA1	91	96.128	Saimiri_boliviensis_boliviensis
ENSTBEG00000014973	SMARCA1	91	84.785	ENSSHAG00000013518	SMARCA1	91	84.785	Sarcophilus_harrisii
ENSTBEG00000014973	SMARCA1	89	82.506	ENSSFOG00015016794	smarca5	92	82.353	Scleropages_formosus
ENSTBEG00000014973	SMARCA1	97	81.996	ENSSFOG00015009043	smarca1	96	81.818	Scleropages_formosus
ENSTBEG00000014973	SMARCA1	89	81.962	ENSSMAG00000004801	smarca5	86	81.929	Scophthalmus_maximus
ENSTBEG00000014973	SMARCA1	89	82.300	ENSSDUG00000020690	smarca5	86	82.262	Seriola_dumerili
ENSTBEG00000014973	SMARCA1	89	82.300	ENSSLDG00000025190	smarca5	86	82.262	Seriola_lalandi_dorsalis
ENSTBEG00000014973	SMARCA1	92	92.371	ENSSARG00000000842	SMARCA1	92	92.371	Sorex_araneus
ENSTBEG00000014973	SMARCA1	100	84.438	ENSSPUG00000000590	SMARCA1	95	84.438	Sphenodon_punctatus
ENSTBEG00000014973	SMARCA1	89	82.751	ENSSPAG00000002894	smarca5	94	82.594	Stegastes_partitus
ENSTBEG00000014973	SMARCA1	99	90.000	ENSSSCG00000012649	SMARCA1	94	90.000	Sus_scrofa
ENSTBEG00000014973	SMARCA1	89	90.755	ENSTGUG00000003899	-	91	90.466	Taeniopygia_guttata
ENSTBEG00000014973	SMARCA1	89	82.638	ENSTRUG00000014094	smarca5	86	82.483	Takifugu_rubripes
ENSTBEG00000014973	SMARCA1	89	82.976	ENSTNIG00000017717	smarca5	85	82.927	Tetraodon_nigroviridis
ENSTBEG00000014973	SMARCA1	99	88.182	ENSTTRG00000006168	SMARCA1	100	88.182	Tursiops_truncatus
ENSTBEG00000014973	SMARCA1	99	89.687	ENSUAMG00000020201	SMARCA1	92	89.687	Ursus_americanus
ENSTBEG00000014973	SMARCA1	99	86.714	ENSUMAG00000004073	SMARCA1	97	86.714	Ursus_maritimus
ENSTBEG00000014973	SMARCA1	78	98.730	ENSVPAG00000010492	-	80	98.730	Vicugna_pacos
ENSTBEG00000014973	SMARCA1	99	90.091	ENSVVUG00000008878	SMARCA1	93	95.801	Vulpes_vulpes
ENSTBEG00000014973	SMARCA1	97	83.093	ENSXETG00000001526	smarca1	98	83.028	Xenopus_tropicalis
ENSTBEG00000014973	SMARCA1	89	82.413	ENSXCOG00000011170	smarca5	88	82.262	Xiphophorus_couchianus
ENSTBEG00000014973	SMARCA1	89	82.413	ENSXMAG00000009678	smarca5	96	81.938	Xiphophorus_maculatus