EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000015386 (Gene tree)
Gene ID: -
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 176443 bases
Position: chrGeneScaffold_2683:110001-286443
Accession: 9349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000013358	zf-C2H2	PF00096.26	5.2e-42	1	7
ENSTBEP00000013358	zf-C2H2	PF00096.26	5.2e-42	2	7
ENSTBEP00000013358	zf-C2H2	PF00096.26	5.2e-42	3	7
ENSTBEP00000013358	zf-C2H2	PF00096.26	5.2e-42	4	7
ENSTBEP00000013358	zf-C2H2	PF00096.26	5.2e-42	5	7
ENSTBEP00000013358	zf-C2H2	PF00096.26	5.2e-42	6	7
ENSTBEP00000013358	zf-C2H2	PF00096.26	5.2e-42	7	7
ENSTBEP00000013358	zf-met	PF12874.7	3.2e-17	1	4
ENSTBEP00000013358	zf-met	PF12874.7	3.2e-17	2	4
ENSTBEP00000013358	zf-met	PF12874.7	3.2e-17	3	4
ENSTBEP00000013358	zf-met	PF12874.7	3.2e-17	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000015397	PRDM5-201	1800	-	ENSTBEP00000013358	599 (aa)	-	UPI0000F609CE

Gene Model

Click here to download ENSTBEG00000015386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000015386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000015386	PRDM5	63	41.379	ENSTBEG00000001263	-	50	41.379
ENSTBEG00000015386	PRDM5	76	46.667	ENSTBEG00000014014	ZBTB48	59	31.293
ENSTBEG00000015386	PRDM5	62	42.105	ENSTBEG00000012287	-	98	43.860
ENSTBEG00000015386	PRDM5	62	44.828	ENSTBEG00000009878	ZNF829	76	44.828
ENSTBEG00000015386	PRDM5	62	51.724	ENSTBEG00000011217	ZFP1	77	51.724
ENSTBEG00000015386	PRDM5	69	38.983	ENSTBEG00000012847	ZNF2	69	38.983
ENSTBEG00000015386	PRDM5	67	50.000	ENSTBEG00000016819	-	70	50.000
ENSTBEG00000015386	PRDM5	63	33.571	ENSTBEG00000015677	ZFP62	83	37.405
ENSTBEG00000015386	PRDM5	64	49.153	ENSTBEG00000004851	ZNF768	54	35.115
ENSTBEG00000015386	PRDM5	64	50.000	ENSTBEG00000001345	ZNF235	59	50.000
ENSTBEG00000015386	PRDM5	62	55.263	ENSTBEG00000017192	ZNF771	68	55.263
ENSTBEG00000015386	PRDM5	62	44.828	ENSTBEG00000003410	-	74	44.828
ENSTBEG00000015386	PRDM5	61	44.828	ENSTBEG00000016262	-	99	44.828
ENSTBEG00000015386	PRDM5	62	45.763	ENSTBEG00000002398	ZNF234	87	45.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000015386	PRDM5	85	96.970	ENSG00000138738	PRDM5	95	93.699	Homo_sapiens
ENSTBEG00000015386	PRDM5	86	67.114	ENSAPOG00000023220	prdm5	95	67.114	Acanthochromis_polyacanthus
ENSTBEG00000015386	PRDM5	82	89.118	ENSAMEG00000003050	PRDM5	100	89.118	Ailuropoda_melanoleuca
ENSTBEG00000015386	PRDM5	86	67.114	ENSACIG00000000406	prdm5	95	67.114	Amphilophus_citrinellus
ENSTBEG00000015386	PRDM5	86	67.114	ENSAOCG00000014806	prdm5	95	67.486	Amphiprion_ocellaris
ENSTBEG00000015386	PRDM5	86	66.393	ENSAPEG00000016846	prdm5	95	67.486	Amphiprion_percula
ENSTBEG00000015386	PRDM5	86	70.492	ENSATEG00000013829	prdm5	95	71.311	Anabas_testudineus
ENSTBEG00000015386	PRDM5	86	79.348	ENSAPLG00000013828	PRDM5	100	79.348	Anas_platyrhynchos
ENSTBEG00000015386	PRDM5	86	70.411	ENSACAG00000012999	PRDM5	95	70.411	Anolis_carolinensis
ENSTBEG00000015386	PRDM5	86	92.055	ENSANAG00000027411	PRDM5	95	92.055	Aotus_nancymaae
ENSTBEG00000015386	PRDM5	86	67.114	ENSACLG00000017996	prdm5	95	67.760	Astatotilapia_calliptera
ENSTBEG00000015386	PRDM5	74	68.276	ENSAMXG00000041864	prdm5	98	69.967	Astyanax_mexicanus
ENSTBEG00000015386	PRDM5	86	90.137	ENSBTAG00000012111	PRDM5	95	90.137	Bos_taurus
ENSTBEG00000015386	PRDM5	85	96.970	ENSCJAG00000003133	PRDM5	95	92.603	Callithrix_jacchus
ENSTBEG00000015386	PRDM5	82	96.875	ENSCAFG00000004179	PRDM5	97	96.875	Canis_familiaris
ENSTBEG00000015386	PRDM5	86	91.781	ENSCAFG00020017685	PRDM5	95	91.781	Canis_lupus_dingo
ENSTBEG00000015386	PRDM5	86	87.945	ENSCHIG00000018772	PRDM5	95	87.945	Capra_hircus
ENSTBEG00000015386	PRDM5	85	96.970	ENSTSYG00000009630	PRDM5	90	96.970	Carlito_syrichta
ENSTBEG00000015386	PRDM5	86	78.474	ENSCAPG00000015217	PRDM5	100	76.510	Cavia_aperea
ENSTBEG00000015386	PRDM5	85	100.000	ENSCPOG00000012883	PRDM5	96	100.000	Cavia_porcellus
ENSTBEG00000015386	PRDM5	85	96.970	ENSCCAG00000023157	PRDM5	98	90.940	Cebus_capucinus
ENSTBEG00000015386	PRDM5	85	98.333	ENSCATG00000042510	PRDM5	92	98.333	Cercocebus_atys
ENSTBEG00000015386	PRDM5	85	100.000	ENSCLAG00000005392	PRDM5	96	100.000	Chinchilla_lanigera
ENSTBEG00000015386	PRDM5	86	85.753	ENSCSAG00000003729	PRDM5	95	85.479	Chlorocebus_sabaeus
ENSTBEG00000015386	PRDM5	86	96.154	ENSCHOG00000007801	PRDM5	83	96.154	Choloepus_hoffmanni
ENSTBEG00000015386	PRDM5	86	77.273	ENSCPBG00000024735	PRDM5	95	77.273	Chrysemys_picta_bellii
ENSTBEG00000015386	PRDM5	85	96.970	ENSCANG00000036807	PRDM5	99	91.333	Colobus_angolensis_palliatus
ENSTBEG00000015386	PRDM5	71	100.000	ENSCGRG00001010581	Prdm5	91	100.000	Cricetulus_griseus_chok1gshd
ENSTBEG00000015386	PRDM5	86	74.497	ENSCGRG00000010996	-	99	74.497	Cricetulus_griseus_crigri
ENSTBEG00000015386	PRDM5	86	66.443	ENSCSEG00000019979	prdm5	95	67.760	Cynoglossus_semilaevis
ENSTBEG00000015386	PRDM5	86	70.219	ENSCVAG00000013692	prdm5	95	71.038	Cyprinodon_variegatus
ENSTBEG00000015386	PRDM5	85	70.924	ENSDARG00000006288	prdm5	94	70.924	Danio_rerio
ENSTBEG00000015386	PRDM5	82	91.471	ENSDNOG00000002009	PRDM5	100	91.471	Dasypus_novemcinctus
ENSTBEG00000015386	PRDM5	86	75.168	ENSDORG00000007739	Prdm5	93	75.168	Dipodomys_ordii
ENSTBEG00000015386	PRDM5	85	88.827	ENSETEG00000020268	PRDM5	100	74.247	Echinops_telfairi
ENSTBEG00000015386	PRDM5	86	68.243	ENSEBUG00000004301	prdm5	95	68.243	Eptatretus_burgeri
ENSTBEG00000015386	PRDM5	86	90.959	ENSEASG00005018365	PRDM5	95	90.959	Equus_asinus_asinus
ENSTBEG00000015386	PRDM5	85	98.333	ENSECAG00000011516	PRDM5	85	98.333	Equus_caballus
ENSTBEG00000015386	PRDM5	86	86.813	ENSECAG00000024747	-	92	86.813	Equus_caballus
ENSTBEG00000015386	PRDM5	85	80.548	ENSEEUG00000010306	PRDM5	95	80.548	Erinaceus_europaeus
ENSTBEG00000015386	PRDM5	85	93.333	ENSELUG00000005894	prdm5	87	93.333	Esox_lucius
ENSTBEG00000015386	PRDM5	85	96.970	ENSFCAG00000025656	PRDM5	95	92.329	Felis_catus
ENSTBEG00000015386	PRDM5	61	76.207	ENSFALG00000008381	PRDM5	90	76.207	Ficedula_albicollis
ENSTBEG00000015386	PRDM5	85	100.000	ENSFDAG00000021361	PRDM5	90	100.000	Fukomys_damarensis
ENSTBEG00000015386	PRDM5	85	68.276	ENSFHEG00000013040	prdm5	94	68.276	Fundulus_heteroclitus
ENSTBEG00000015386	PRDM5	86	81.707	ENSGMOG00000012038	prdm5	100	93.220	Gadus_morhua
ENSTBEG00000015386	PRDM5	86	79.348	ENSGALG00000011963	PRDM5	95	79.348	Gallus_gallus
ENSTBEG00000015386	PRDM5	85	93.333	ENSGAFG00000019233	prdm5	89	93.333	Gambusia_affinis
ENSTBEG00000015386	PRDM5	85	93.548	ENSGAGG00000020362	PRDM5	93	93.548	Gopherus_agassizii
ENSTBEG00000015386	PRDM5	85	96.970	ENSGGOG00000013562	PRDM5	95	93.699	Gorilla_gorilla
ENSTBEG00000015386	PRDM5	86	67.114	ENSHBUG00000023375	prdm5	95	67.486	Haplochromis_burtoni
ENSTBEG00000015386	PRDM5	86	97.561	ENSHGLG00000003010	PRDM5	92	97.561	Heterocephalus_glaber_female
ENSTBEG00000015386	PRDM5	85	100.000	ENSHGLG00100003696	PRDM5	90	100.000	Heterocephalus_glaber_male
ENSTBEG00000015386	PRDM5	86	71.117	ENSHCOG00000012131	prdm5	95	71.117	Hippocampus_comes
ENSTBEG00000015386	PRDM5	85	93.333	ENSIPUG00000001248	prdm5	95	72.752	Ictalurus_punctatus
ENSTBEG00000015386	PRDM5	85	100.000	ENSSTOG00000004741	PRDM5	96	100.000	Ictidomys_tridecemlineatus
ENSTBEG00000015386	PRDM5	85	100.000	ENSJJAG00000011464	Prdm5	96	100.000	Jaculus_jaculus
ENSTBEG00000015386	PRDM5	86	68.033	ENSKMAG00000013663	prdm5	95	67.760	Kryptolebias_marmoratus
ENSTBEG00000015386	PRDM5	86	70.492	ENSLBEG00000022736	prdm5	95	70.492	Labrus_bergylta
ENSTBEG00000015386	PRDM5	82	76.385	ENSLACG00000009187	PRDM5	99	77.259	Latimeria_chalumnae
ENSTBEG00000015386	PRDM5	86	74.795	ENSLOCG00000009778	prdm5	95	74.795	Lepisosteus_oculatus
ENSTBEG00000015386	PRDM5	86	84.110	ENSLAFG00000006532	PRDM5	95	83.836	Loxodonta_africana
ENSTBEG00000015386	PRDM5	85	98.333	ENSMFAG00000045845	PRDM5	92	98.333	Macaca_fascicularis
ENSTBEG00000015386	PRDM5	85	96.970	ENSMMUG00000003249	PRDM5	98	92.282	Macaca_mulatta
ENSTBEG00000015386	PRDM5	85	98.333	ENSMNEG00000019018	PRDM5	92	98.333	Macaca_nemestrina
ENSTBEG00000015386	PRDM5	85	96.970	ENSMLEG00000023145	PRDM5	100	93.425	Mandrillus_leucophaeus
ENSTBEG00000015386	PRDM5	86	70.027	ENSMAMG00000013419	prdm5	95	70.572	Mastacembelus_armatus
ENSTBEG00000015386	PRDM5	86	67.114	ENSMZEG00005020645	prdm5	95	67.486	Maylandia_zebra
ENSTBEG00000015386	PRDM5	86	79.076	ENSMGAG00000010710	PRDM5	100	79.076	Meleagris_gallopavo
ENSTBEG00000015386	PRDM5	86	78.356	ENSMAUG00000006768	Prdm5	95	78.082	Mesocricetus_auratus
ENSTBEG00000015386	PRDM5	85	100.000	ENSMICG00000001459	PRDM5	90	100.000	Microcebus_murinus
ENSTBEG00000015386	PRDM5	85	100.000	ENSMOCG00000016267	Prdm5	90	100.000	Microtus_ochrogaster
ENSTBEG00000015386	PRDM5	86	67.760	ENSMMOG00000006035	prdm5	95	67.486	Mola_mola
ENSTBEG00000015386	PRDM5	86	71.662	ENSMODG00000018942	PRDM5	95	71.662	Monodelphis_domestica
ENSTBEG00000015386	PRDM5	86	67.114	ENSMALG00000013934	prdm5	92	67.114	Monopterus_albus
ENSTBEG00000015386	PRDM5	86	80.000	MGP_CAROLIEiJ_G0028463	Prdm5	98	79.726	Mus_caroli
ENSTBEG00000015386	PRDM5	85	100.000	ENSMUSG00000029913	Prdm5	90	100.000	Mus_musculus
ENSTBEG00000015386	PRDM5	85	100.000	MGP_PahariEiJ_G0022203	Prdm5	90	100.000	Mus_pahari
ENSTBEG00000015386	PRDM5	85	100.000	MGP_SPRETEiJ_G0029467	Prdm5	90	100.000	Mus_spretus
ENSTBEG00000015386	PRDM5	86	91.507	ENSMPUG00000017415	PRDM5	95	91.507	Mustela_putorius_furo
ENSTBEG00000015386	PRDM5	82	82.059	ENSMLUG00000006097	PRDM5	100	82.059	Myotis_lucifugus
ENSTBEG00000015386	PRDM5	86	75.168	ENSNGAG00000018317	Prdm5	93	75.168	Nannospalax_galili
ENSTBEG00000015386	PRDM5	86	66.393	ENSNBRG00000004976	prdm5	95	67.760	Neolamprologus_brichardi
ENSTBEG00000015386	PRDM5	85	96.970	ENSNLEG00000009107	PRDM5	98	91.030	Nomascus_leucogenys
ENSTBEG00000015386	PRDM5	69	91.946	ENSMEUG00000006576	-	66	91.946	Notamacropus_eugenii
ENSTBEG00000015386	PRDM5	86	100.000	ENSOPRG00000011066	-	89	100.000	Ochotona_princeps
ENSTBEG00000015386	PRDM5	86	76.510	ENSODEG00000009133	PRDM5	93	76.510	Octodon_degus
ENSTBEG00000015386	PRDM5	86	70.765	ENSONIG00000003111	prdm5	95	71.585	Oreochromis_niloticus
ENSTBEG00000015386	PRDM5	85	93.750	ENSOANG00000015109	PRDM5	91	93.750	Ornithorhynchus_anatinus
ENSTBEG00000015386	PRDM5	84	91.785	ENSOCUG00000013454	PRDM5	100	91.785	Oryctolagus_cuniculus
ENSTBEG00000015386	PRDM5	86	67.114	ENSORLG00000016247	prdm5	95	67.486	Oryzias_latipes
ENSTBEG00000015386	PRDM5	86	67.114	ENSORLG00020018051	prdm5	95	67.114	Oryzias_latipes_hni
ENSTBEG00000015386	PRDM5	86	67.114	ENSORLG00015013760	prdm5	95	67.486	Oryzias_latipes_hsok
ENSTBEG00000015386	PRDM5	86	67.114	ENSOMEG00000005143	prdm5	95	67.114	Oryzias_melastigma
ENSTBEG00000015386	PRDM5	74	90.236	ENSOGAG00000009996	PRDM5	98	89.369	Otolemur_garnettii
ENSTBEG00000015386	PRDM5	85	98.333	ENSOARG00000015473	PRDM5	100	96.774	Ovis_aries
ENSTBEG00000015386	PRDM5	85	96.970	ENSPPAG00000043045	PRDM5	100	93.768	Pan_paniscus
ENSTBEG00000015386	PRDM5	85	96.970	ENSPPRG00000001020	PRDM5	95	92.329	Panthera_pardus
ENSTBEG00000015386	PRDM5	85	96.970	ENSPTIG00000010807	PRDM5	95	92.055	Panthera_tigris_altaica
ENSTBEG00000015386	PRDM5	85	96.970	ENSPTRG00000016403	PRDM5	95	93.425	Pan_troglodytes
ENSTBEG00000015386	PRDM5	85	98.333	ENSPANG00000023612	PRDM5	92	98.333	Papio_anubis
ENSTBEG00000015386	PRDM5	85	64.850	ENSPKIG00000015492	prdm5	93	62.943	Paramormyrops_kingsleyae
ENSTBEG00000015386	PRDM5	86	77.446	ENSPSIG00000013505	PRDM5	95	77.446	Pelodiscus_sinensis
ENSTBEG00000015386	PRDM5	86	67.114	ENSPMGG00000012622	prdm5	95	67.114	Periophthalmus_magnuspinnatus
ENSTBEG00000015386	PRDM5	63	69.264	ENSPMAG00000005248	prdm5	100	69.264	Petromyzon_marinus
ENSTBEG00000015386	PRDM5	61	68.671	ENSPFOG00000018630	prdm5	88	69.304	Poecilia_formosa
ENSTBEG00000015386	PRDM5	86	69.945	ENSPLAG00000014148	prdm5	95	71.038	Poecilia_latipinna
ENSTBEG00000015386	PRDM5	86	67.213	ENSPMEG00000018002	prdm5	95	68.033	Poecilia_mexicana
ENSTBEG00000015386	PRDM5	86	67.213	ENSPREG00000018366	prdm5	95	68.033	Poecilia_reticulata
ENSTBEG00000015386	PRDM5	86	93.151	ENSPPYG00000015031	PRDM5	95	93.151	Pongo_abelii
ENSTBEG00000015386	PRDM5	86	89.086	ENSPCAG00000011671	PRDM5	96	89.086	Procavia_capensis
ENSTBEG00000015386	PRDM5	85	100.000	ENSPCOG00000022828	PRDM5	89	100.000	Propithecus_coquereli
ENSTBEG00000015386	PRDM5	86	82.192	ENSPVAG00000012309	PRDM5	100	82.192	Pteropus_vampyrus
ENSTBEG00000015386	PRDM5	86	67.114	ENSPNYG00000012194	prdm5	95	67.760	Pundamilia_nyererei
ENSTBEG00000015386	PRDM5	85	68.579	ENSPNAG00000026181	prdm5	94	68.306	Pygocentrus_nattereri
ENSTBEG00000015386	PRDM5	83	69.577	ENSPNAG00000023191	-	99	70.787	Pygocentrus_nattereri
ENSTBEG00000015386	PRDM5	85	78.904	ENSRNOG00000023679	Prdm5	92	78.630	Rattus_norvegicus
ENSTBEG00000015386	PRDM5	85	96.970	ENSRBIG00000041307	PRDM5	90	96.970	Rhinopithecus_bieti
ENSTBEG00000015386	PRDM5	86	93.699	ENSRROG00000035343	PRDM5	100	93.699	Rhinopithecus_roxellana
ENSTBEG00000015386	PRDM5	85	96.970	ENSSBOG00000022100	PRDM5	98	91.892	Saimiri_boliviensis_boliviensis
ENSTBEG00000015386	PRDM5	81	91.667	ENSSHAG00000003250	PRDM5	100	91.667	Sarcophilus_harrisii
ENSTBEG00000015386	PRDM5	86	67.785	ENSSFOG00015020478	prdm5	95	67.785	Scleropages_formosus
ENSTBEG00000015386	PRDM5	86	70.492	ENSSMAG00000018844	prdm5	95	70.492	Scophthalmus_maximus
ENSTBEG00000015386	PRDM5	85	93.333	ENSSDUG00000020397	prdm5	88	93.333	Seriola_dumerili
ENSTBEG00000015386	PRDM5	85	93.333	ENSSLDG00000013353	prdm5	89	93.333	Seriola_lalandi_dorsalis
ENSTBEG00000015386	PRDM5	86	68.376	ENSSARG00000014129	-	80	68.376	Sorex_araneus
ENSTBEG00000015386	PRDM5	86	89.024	ENSSPUG00000009941	PRDM5	93	89.024	Sphenodon_punctatus
ENSTBEG00000015386	PRDM5	86	69.945	ENSSPAG00000013866	prdm5	95	71.311	Stegastes_partitus
ENSTBEG00000015386	PRDM5	86	91.507	ENSSSCG00000009101	PRDM5	95	91.507	Sus_scrofa
ENSTBEG00000015386	PRDM5	86	78.356	ENSTGUG00000001920	PRDM5	100	78.356	Taeniopygia_guttata
ENSTBEG00000015386	PRDM5	86	67.114	ENSTRUG00000013850	prdm5	95	67.114	Takifugu_rubripes
ENSTBEG00000015386	PRDM5	86	50.242	ENSTNIG00000005901	prdm5	95	50.242	Tetraodon_nigroviridis
ENSTBEG00000015386	PRDM5	86	90.959	ENSTTRG00000010996	PRDM5	95	90.959	Tursiops_truncatus
ENSTBEG00000015386	PRDM5	85	98.333	ENSUAMG00000009994	PRDM5	84	98.333	Ursus_americanus
ENSTBEG00000015386	PRDM5	86	91.507	ENSUMAG00000003733	PRDM5	99	91.507	Ursus_maritimus
ENSTBEG00000015386	PRDM5	86	91.781	ENSVPAG00000007435	PRDM5	98	91.781	Vicugna_pacos
ENSTBEG00000015386	PRDM5	84	92.068	ENSVVUG00000013192	PRDM5	100	92.068	Vulpes_vulpes
ENSTBEG00000015386	PRDM5	86	75.683	ENSXETG00000002101	prdm5	95	75.683	Xenopus_tropicalis
ENSTBEG00000015386	PRDM5	86	67.114	ENSXCOG00000008567	prdm5	95	67.760	Xiphophorus_couchianus
ENSTBEG00000015386	PRDM5	85	93.333	ENSXMAG00000013825	prdm5	89	93.333	Xiphophorus_maculatus