EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000015620 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 19756 bases
Position: chrGeneScaffold_746:125734-145489
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000013559	zf-U11-48K	PF05253.12	9.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000015619	SNRNP48-201	1017	-	ENSTBEP00000013559	338 (aa)	-	UPI0000F5F4CD

Gene Model

Click here to download ENSTBEG00000015620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000015620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000015620	SNRNP48	100	74.926	ENSG00000168566	SNRNP48	95	83.099	Homo_sapiens
ENSTBEG00000015620	SNRNP48	77	47.909	ENSAPOG00000021430	snrnp48	75	47.909	Acanthochromis_polyacanthus
ENSTBEG00000015620	SNRNP48	78	90.943	ENSAMEG00000017349	SNRNP48	76	90.943	Ailuropoda_melanoleuca
ENSTBEG00000015620	SNRNP48	77	46.565	ENSACIG00000002032	snrnp48	76	46.565	Amphilophus_citrinellus
ENSTBEG00000015620	SNRNP48	77	47.909	ENSAOCG00000010562	snrnp48	75	48.106	Amphiprion_ocellaris
ENSTBEG00000015620	SNRNP48	78	46.992	ENSAPEG00000003231	snrnp48	77	47.191	Amphiprion_percula
ENSTBEG00000015620	SNRNP48	72	51.639	ENSATEG00000020210	snrnp48	71	51.613	Anabas_testudineus
ENSTBEG00000015620	SNRNP48	62	70.335	ENSACAG00000002811	SNRNP48	65	70.335	Anolis_carolinensis
ENSTBEG00000015620	SNRNP48	100	74.336	ENSANAG00000033538	SNRNP48	100	74.336	Aotus_nancymaae
ENSTBEG00000015620	SNRNP48	76	49.421	ENSAMXG00000015309	snrnp48	76	49.421	Astyanax_mexicanus
ENSTBEG00000015620	SNRNP48	100	70.000	ENSBTAG00000001123	SNRNP48	100	71.261	Bos_taurus
ENSTBEG00000015620	SNRNP48	100	74.336	ENSCJAG00000021330	SNRNP48	100	74.336	Callithrix_jacchus
ENSTBEG00000015620	SNRNP48	99	74.107	ENSCAFG00000009574	SNRNP48	83	74.107	Canis_familiaris
ENSTBEG00000015620	SNRNP48	99	74.107	ENSCAFG00020013203	SNRNP48	99	74.107	Canis_lupus_dingo
ENSTBEG00000015620	SNRNP48	100	71.176	ENSCHIG00000015216	SNRNP48	100	72.434	Capra_hircus
ENSTBEG00000015620	SNRNP48	100	73.156	ENSTSYG00000000698	SNRNP48	100	73.156	Carlito_syrichta
ENSTBEG00000015620	SNRNP48	91	68.608	ENSCAPG00000006768	SNRNP48	100	68.608	Cavia_aperea
ENSTBEG00000015620	SNRNP48	100	73.746	ENSCPOG00000007910	SNRNP48	100	73.746	Cavia_porcellus
ENSTBEG00000015620	SNRNP48	100	73.451	ENSCCAG00000035652	SNRNP48	100	73.451	Cebus_capucinus
ENSTBEG00000015620	SNRNP48	100	74.041	ENSCATG00000033947	SNRNP48	98	82.979	Cercocebus_atys
ENSTBEG00000015620	SNRNP48	100	72.861	ENSCLAG00000003765	SNRNP48	100	72.861	Chinchilla_lanigera
ENSTBEG00000015620	SNRNP48	100	74.336	ENSCSAG00000007409	SNRNP48	100	74.336	Chlorocebus_sabaeus
ENSTBEG00000015620	SNRNP48	64	69.091	ENSCPBG00000019146	SNRNP48	68	69.091	Chrysemys_picta_bellii
ENSTBEG00000015620	SNRNP48	71	32.794	ENSCING00000004121	-	70	32.794	Ciona_intestinalis
ENSTBEG00000015620	SNRNP48	100	74.336	ENSCANG00000030017	SNRNP48	100	74.336	Colobus_angolensis_palliatus
ENSTBEG00000015620	SNRNP48	79	73.308	ENSCGRG00001008805	-	78	73.308	Cricetulus_griseus_chok1gshd
ENSTBEG00000015620	SNRNP48	100	72.485	ENSCGRG00001001076	-	100	72.485	Cricetulus_griseus_chok1gshd
ENSTBEG00000015620	SNRNP48	100	72.485	ENSCGRG00000007781	Snrnp48	100	72.485	Cricetulus_griseus_crigri
ENSTBEG00000015620	SNRNP48	76	48.077	ENSCSEG00000000722	snrnp48	72	48.077	Cynoglossus_semilaevis
ENSTBEG00000015620	SNRNP48	76	47.104	ENSCVAG00000019829	snrnp48	62	48.387	Cyprinodon_variegatus
ENSTBEG00000015620	SNRNP48	75	47.638	ENSDARG00000039989	snrnp48	73	47.638	Danio_rerio
ENSTBEG00000015620	SNRNP48	100	73.824	ENSDNOG00000014978	SNRNP48	99	86.029	Dasypus_novemcinctus
ENSTBEG00000015620	SNRNP48	99	72.271	ENSDORG00000015140	Snrnp48	99	82.840	Dipodomys_ordii
ENSTBEG00000015620	SNRNP48	99	73.964	ENSEASG00005012021	SNRNP48	100	73.746	Equus_asinus_asinus
ENSTBEG00000015620	SNRNP48	100	74.336	ENSECAG00000026937	SNRNP48	100	74.336	Equus_caballus
ENSTBEG00000015620	SNRNP48	79	63.806	ENSEEUG00000015437	SNRNP48	79	63.806	Erinaceus_europaeus
ENSTBEG00000015620	SNRNP48	75	48.638	ENSELUG00000009766	snrnp48	73	48.120	Esox_lucius
ENSTBEG00000015620	SNRNP48	100	74.041	ENSFCAG00000018853	SNRNP48	100	74.041	Felis_catus
ENSTBEG00000015620	SNRNP48	61	69.903	ENSFALG00000007797	SNRNP48	66	69.903	Ficedula_albicollis
ENSTBEG00000015620	SNRNP48	100	72.861	ENSFDAG00000009231	SNRNP48	100	72.861	Fukomys_damarensis
ENSTBEG00000015620	SNRNP48	59	53.960	ENSFHEG00000014647	snrnp48	72	54.067	Fundulus_heteroclitus
ENSTBEG00000015620	SNRNP48	73	45.968	ENSGMOG00000018599	-	81	45.693	Gadus_morhua
ENSTBEG00000015620	SNRNP48	62	69.524	ENSGALG00000013005	SNRNP48	71	69.524	Gallus_gallus
ENSTBEG00000015620	SNRNP48	75	48.828	ENSGAFG00000021639	snrnp48	73	48.828	Gambusia_affinis
ENSTBEG00000015620	SNRNP48	74	48.606	ENSGACG00000017756	-	74	49.020	Gasterosteus_aculeatus
ENSTBEG00000015620	SNRNP48	62	70.000	ENSGAGG00000000865	SNRNP48	68	70.000	Gopherus_agassizii
ENSTBEG00000015620	SNRNP48	100	74.926	ENSGGOG00000013220	SNRNP48	100	74.926	Gorilla_gorilla
ENSTBEG00000015620	SNRNP48	76	47.510	ENSHBUG00000017066	snrnp48	76	47.584	Haplochromis_burtoni
ENSTBEG00000015620	SNRNP48	99	73.077	ENSHGLG00000015241	SNRNP48	100	72.861	Heterocephalus_glaber_female
ENSTBEG00000015620	SNRNP48	99	73.077	ENSHGLG00100010027	SNRNP48	100	72.861	Heterocephalus_glaber_male
ENSTBEG00000015620	SNRNP48	74	45.020	ENSHCOG00000014066	snrnp48	74	45.038	Hippocampus_comes
ENSTBEG00000015620	SNRNP48	100	76.401	ENSSTOG00000014635	SNRNP48	100	89.349	Ictidomys_tridecemlineatus
ENSTBEG00000015620	SNRNP48	100	68.732	ENSJJAG00000011495	Snrnp48	100	78.804	Jaculus_jaculus
ENSTBEG00000015620	SNRNP48	74	47.410	ENSKMAG00000016514	snrnp48	73	47.656	Kryptolebias_marmoratus
ENSTBEG00000015620	SNRNP48	79	46.296	ENSLBEG00000026249	snrnp48	77	46.296	Labrus_bergylta
ENSTBEG00000015620	SNRNP48	75	55.469	ENSLACG00000003958	SNRNP48	75	55.000	Latimeria_chalumnae
ENSTBEG00000015620	SNRNP48	75	51.953	ENSLOCG00000004187	snrnp48	74	51.953	Lepisosteus_oculatus
ENSTBEG00000015620	SNRNP48	79	87.594	ENSLAFG00000011152	SNRNP48	78	87.594	Loxodonta_africana
ENSTBEG00000015620	SNRNP48	100	74.631	ENSMFAG00000045216	SNRNP48	95	85.401	Macaca_fascicularis
ENSTBEG00000015620	SNRNP48	100	74.631	ENSMMUG00000014785	SNRNP48	100	74.631	Macaca_mulatta
ENSTBEG00000015620	SNRNP48	100	74.631	ENSMNEG00000042269	SNRNP48	100	74.631	Macaca_nemestrina
ENSTBEG00000015620	SNRNP48	100	74.631	ENSMLEG00000034004	SNRNP48	95	85.401	Mandrillus_leucophaeus
ENSTBEG00000015620	SNRNP48	77	46.947	ENSMAMG00000018673	snrnp48	66	46.947	Mastacembelus_armatus
ENSTBEG00000015620	SNRNP48	60	71.287	ENSMGAG00000006037	SNRNP48	68	71.287	Meleagris_gallopavo
ENSTBEG00000015620	SNRNP48	100	73.077	ENSMAUG00000011944	Snrnp48	100	73.077	Mesocricetus_auratus
ENSTBEG00000015620	SNRNP48	79	89.098	ENSMICG00000012497	SNRNP48	78	89.098	Microcebus_murinus
ENSTBEG00000015620	SNRNP48	100	72.485	ENSMOCG00000015555	Snrnp48	100	72.485	Microtus_ochrogaster
ENSTBEG00000015620	SNRNP48	54	50.811	ENSMMOG00000003072	-	58	50.811	Mola_mola
ENSTBEG00000015620	SNRNP48	78	73.004	ENSMODG00000009996	SNRNP48	71	73.004	Monodelphis_domestica
ENSTBEG00000015620	SNRNP48	75	50.787	ENSMALG00000005725	snrnp48	73	51.751	Monopterus_albus
ENSTBEG00000015620	SNRNP48	100	71.893	MGP_CAROLIEiJ_G0018441	Snrnp48	100	81.319	Mus_caroli
ENSTBEG00000015620	SNRNP48	100	71.302	ENSMUSG00000021431	Snrnp48	100	80.769	Mus_musculus
ENSTBEG00000015620	SNRNP48	100	71.598	MGP_PahariEiJ_G0019509	Snrnp48	100	71.598	Mus_pahari
ENSTBEG00000015620	SNRNP48	100	71.006	MGP_SPRETEiJ_G0019321	Snrnp48	100	80.220	Mus_spretus
ENSTBEG00000015620	SNRNP48	99	72.189	ENSNGAG00000004849	Snrnp48	99	72.189	Nannospalax_galili
ENSTBEG00000015620	SNRNP48	76	47.126	ENSNBRG00000012127	snrnp48	76	47.212	Neolamprologus_brichardi
ENSTBEG00000015620	SNRNP48	100	75.221	ENSNLEG00000011667	SNRNP48	100	75.221	Nomascus_leucogenys
ENSTBEG00000015620	SNRNP48	79	80.075	ENSOPRG00000015471	SNRNP48	82	80.075	Ochotona_princeps
ENSTBEG00000015620	SNRNP48	76	47.126	ENSONIG00000001520	snrnp48	76	47.212	Oreochromis_niloticus
ENSTBEG00000015620	SNRNP48	57	63.462	ENSOANG00000019888	-	100	64.423	Ornithorhynchus_anatinus
ENSTBEG00000015620	SNRNP48	73	87.903	ENSOCUG00000005168	SNRNP48	87	87.218	Oryctolagus_cuniculus
ENSTBEG00000015620	SNRNP48	75	48.047	ENSORLG00000015654	snrnp48	73	48.462	Oryzias_latipes
ENSTBEG00000015620	SNRNP48	75	47.266	ENSORLG00020015976	snrnp48	63	47.692	Oryzias_latipes_hni
ENSTBEG00000015620	SNRNP48	75	48.047	ENSORLG00015022379	snrnp48	63	48.462	Oryzias_latipes_hsok
ENSTBEG00000015620	SNRNP48	75	48.235	ENSOMEG00000022007	snrnp48	75	47.925	Oryzias_melastigma
ENSTBEG00000015620	SNRNP48	76	87.984	ENSOGAG00000005275	SNRNP48	78	87.984	Otolemur_garnettii
ENSTBEG00000015620	SNRNP48	85	70.035	ENSOARG00000017319	SNRNP48	100	70.035	Ovis_aries
ENSTBEG00000015620	SNRNP48	100	75.221	ENSPPAG00000032873	SNRNP48	100	75.221	Pan_paniscus
ENSTBEG00000015620	SNRNP48	100	74.041	ENSPPRG00000004283	SNRNP48	100	74.041	Panthera_pardus
ENSTBEG00000015620	SNRNP48	85	72.125	ENSPTIG00000013502	SNRNP48	100	72.125	Panthera_tigris_altaica
ENSTBEG00000015620	SNRNP48	100	75.221	ENSPTRG00000017703	SNRNP48	100	75.221	Pan_troglodytes
ENSTBEG00000015620	SNRNP48	100	74.631	ENSPANG00000000771	SNRNP48	98	83.688	Papio_anubis
ENSTBEG00000015620	SNRNP48	72	51.822	ENSPKIG00000013703	snrnp48	53	51.751	Paramormyrops_kingsleyae
ENSTBEG00000015620	SNRNP48	66	66.667	ENSPSIG00000002213	SNRNP48	69	66.667	Pelodiscus_sinensis
ENSTBEG00000015620	SNRNP48	72	47.154	ENSPMGG00000008120	snrnp48	86	47.154	Periophthalmus_magnuspinnatus
ENSTBEG00000015620	SNRNP48	100	73.077	ENSPEMG00000008872	Snrnp48	100	85.876	Peromyscus_maniculatus_bairdii
ENSTBEG00000015620	SNRNP48	75	49.219	ENSPFOG00000003578	snrnp48	73	48.828	Poecilia_formosa
ENSTBEG00000015620	SNRNP48	69	48.291	ENSPLAG00000002290	snrnp48	79	48.291	Poecilia_latipinna
ENSTBEG00000015620	SNRNP48	75	49.219	ENSPMEG00000018033	snrnp48	73	48.828	Poecilia_mexicana
ENSTBEG00000015620	SNRNP48	74	49.402	ENSPREG00000018541	snrnp48	73	49.609	Poecilia_reticulata
ENSTBEG00000015620	SNRNP48	100	73.746	ENSPPYG00000016209	SNRNP48	100	73.746	Pongo_abelii
ENSTBEG00000015620	SNRNP48	79	70.677	ENSPCAG00000011991	SNRNP48	99	70.677	Procavia_capensis
ENSTBEG00000015620	SNRNP48	100	72.566	ENSPVAG00000002854	SNRNP48	100	72.566	Pteropus_vampyrus
ENSTBEG00000015620	SNRNP48	76	47.893	ENSPNYG00000015399	snrnp48	87	45.353	Pundamilia_nyererei
ENSTBEG00000015620	SNRNP48	100	71.893	ENSRNOG00000013756	Snrnp48	100	71.893	Rattus_norvegicus
ENSTBEG00000015620	SNRNP48	78	89.811	ENSRBIG00000043856	SNRNP48	98	83.688	Rhinopithecus_bieti
ENSTBEG00000015620	SNRNP48	100	74.336	ENSRROG00000043229	SNRNP48	100	74.336	Rhinopithecus_roxellana
ENSTBEG00000015620	SNRNP48	100	74.631	ENSSBOG00000019486	SNRNP48	100	74.631	Saimiri_boliviensis_boliviensis
ENSTBEG00000015620	SNRNP48	77	73.106	ENSSHAG00000014483	SNRNP48	76	73.106	Sarcophilus_harrisii
ENSTBEG00000015620	SNRNP48	74	50.391	ENSSFOG00015006610	snrnp48	62	50.000	Scleropages_formosus
ENSTBEG00000015620	SNRNP48	75	48.819	ENSSDUG00000014953	snrnp48	73	48.819	Seriola_dumerili
ENSTBEG00000015620	SNRNP48	74	49.407	ENSSLDG00000005989	snrnp48	73	49.407	Seriola_lalandi_dorsalis
ENSTBEG00000015620	SNRNP48	64	67.890	ENSSPUG00000006257	SNRNP48	62	67.890	Sphenodon_punctatus
ENSTBEG00000015620	SNRNP48	74	46.825	ENSSPAG00000006454	snrnp48	72	48.016	Stegastes_partitus
ENSTBEG00000015620	SNRNP48	61	69.417	ENSTGUG00000007575	SNRNP48	66	69.417	Taeniopygia_guttata
ENSTBEG00000015620	SNRNP48	72	50.000	ENSTRUG00000007031	snrnp48	73	50.593	Takifugu_rubripes
ENSTBEG00000015620	SNRNP48	75	45.703	ENSTNIG00000012977	-	76	45.703	Tetraodon_nigroviridis
ENSTBEG00000015620	SNRNP48	100	71.386	ENSTTRG00000016715	SNRNP48	100	71.386	Tursiops_truncatus
ENSTBEG00000015620	SNRNP48	100	75.516	ENSUAMG00000003690	SNRNP48	100	75.516	Ursus_americanus
ENSTBEG00000015620	SNRNP48	63	88.318	ENSVPAG00000003557	SNRNP48	100	70.383	Vicugna_pacos
ENSTBEG00000015620	SNRNP48	99	74.107	ENSVVUG00000004996	SNRNP48	99	74.107	Vulpes_vulpes
ENSTBEG00000015620	SNRNP48	73	54.435	ENSXETG00000020447	snrnp48	71	54.435	Xenopus_tropicalis
ENSTBEG00000015620	SNRNP48	69	48.511	ENSXCOG00000004478	snrnp48	71	48.511	Xiphophorus_couchianus
ENSTBEG00000015620	SNRNP48	75	49.219	ENSXMAG00000013595	snrnp48	73	49.219	Xiphophorus_maculatus