EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000016082 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 91872 bases
Position: chrGeneScaffold_1918:66128-157999
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000014032	Rif1_N	PF12231.8	4.5e-57	1	2
ENSTBEP00000014032	Rif1_N	PF12231.8	4.5e-57	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000016151	RIF1-201	7374	-	ENSTBEP00000014032	2457 (aa)	-	UPI0000F6023E

Gene Model

Click here to download ENSTBEG00000016082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000016082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000016082	RIF1	81	87.975	ENSG00000080345	RIF1	97	76.549	Homo_sapiens
ENSTBEG00000016082	RIF1	64	53.448	ENSAPOG00000011073	rif1	57	53.448	Acanthochromis_polyacanthus
ENSTBEG00000016082	RIF1	82	91.083	ENSAMEG00000008461	RIF1	84	91.083	Ailuropoda_melanoleuca
ENSTBEG00000016082	RIF1	68	54.435	ENSACIG00000017765	rif1	74	54.435	Amphilophus_citrinellus
ENSTBEG00000016082	RIF1	57	54.582	ENSAOCG00000017231	rif1	58	54.582	Amphiprion_ocellaris
ENSTBEG00000016082	RIF1	64	54.490	ENSAPEG00000013228	rif1	57	54.490	Amphiprion_percula
ENSTBEG00000016082	RIF1	57	52.953	ENSATEG00000022887	rif1	60	52.953	Anabas_testudineus
ENSTBEG00000016082	RIF1	69	67.081	ENSAPLG00000007092	RIF1	76	67.081	Anas_platyrhynchos
ENSTBEG00000016082	RIF1	68	54.375	ENSACAG00000003714	RIF1	76	54.375	Anolis_carolinensis
ENSTBEG00000016082	RIF1	82	89.873	ENSANAG00000024840	RIF1	83	89.873	Aotus_nancymaae
ENSTBEG00000016082	RIF1	57	54.386	ENSAMXG00000010910	rif1	58	54.386	Astyanax_mexicanus
ENSTBEG00000016082	RIF1	76	89.873	ENSBTAG00000021020	RIF1	84	89.873	Bos_taurus
ENSTBEG00000016082	RIF1	81	89.241	ENSCJAG00000003138	RIF1	83	89.241	Callithrix_jacchus
ENSTBEG00000016082	RIF1	82	89.241	ENSCAFG00000005670	RIF1	80	89.241	Canis_familiaris
ENSTBEG00000016082	RIF1	81	89.241	ENSCAFG00020016401	RIF1	82	89.241	Canis_lupus_dingo
ENSTBEG00000016082	RIF1	82	89.873	ENSCHIG00000020327	RIF1	83	89.873	Capra_hircus
ENSTBEG00000016082	RIF1	82	91.667	ENSTSYG00000008861	RIF1	83	91.667	Carlito_syrichta
ENSTBEG00000016082	RIF1	60	89.172	ENSCAPG00000008957	RIF1	76	89.172	Cavia_aperea
ENSTBEG00000016082	RIF1	80	89.172	ENSCPOG00000037898	RIF1	80	89.172	Cavia_porcellus
ENSTBEG00000016082	RIF1	82	89.873	ENSCCAG00000024760	RIF1	83	89.873	Cebus_capucinus
ENSTBEG00000016082	RIF1	82	89.873	ENSCATG00000033353	RIF1	83	89.873	Cercocebus_atys
ENSTBEG00000016082	RIF1	78	88.535	ENSCLAG00000001517	RIF1	82	88.535	Chinchilla_lanigera
ENSTBEG00000016082	RIF1	82	90.506	ENSCSAG00000016089	RIF1	82	90.506	Chlorocebus_sabaeus
ENSTBEG00000016082	RIF1	75	87.261	ENSCHOG00000007187	RIF1	75	87.261	Choloepus_hoffmanni
ENSTBEG00000016082	RIF1	71	69.136	ENSCPBG00000025885	RIF1	77	69.136	Chrysemys_picta_bellii
ENSTBEG00000016082	RIF1	77	96.078	ENSCANG00000028962	RIF1	82	96.078	Colobus_angolensis_palliatus
ENSTBEG00000016082	RIF1	78	85.987	ENSCGRG00001024589	Rif1	79	85.987	Cricetulus_griseus_chok1gshd
ENSTBEG00000016082	RIF1	81	85.987	ENSCGRG00000010713	Rif1	82	85.987	Cricetulus_griseus_crigri
ENSTBEG00000016082	RIF1	54	68.657	ENSCSEG00000003945	rif1	64	68.657	Cynoglossus_semilaevis
ENSTBEG00000016082	RIF1	55	53.878	ENSCVAG00000022479	rif1	61	62.791	Cyprinodon_variegatus
ENSTBEG00000016082	RIF1	57	51.875	ENSDARG00000062650	rif1	59	52.469	Danio_rerio
ENSTBEG00000016082	RIF1	82	91.724	ENSDNOG00000011194	RIF1	79	91.724	Dasypus_novemcinctus
ENSTBEG00000016082	RIF1	72	70.028	ENSETEG00000012421	RIF1	73	70.028	Echinops_telfairi
ENSTBEG00000016082	RIF1	82	91.772	ENSEASG00005023434	RIF1	83	91.772	Equus_asinus_asinus
ENSTBEG00000016082	RIF1	82	91.772	ENSECAG00000012679	RIF1	83	91.772	Equus_caballus
ENSTBEG00000016082	RIF1	53	55.144	ENSELUG00000006826	rif1	50	55.242	Esox_lucius
ENSTBEG00000016082	RIF1	82	89.241	ENSFCAG00000029742	RIF1	83	89.241	Felis_catus
ENSTBEG00000016082	RIF1	58	70.732	ENSFALG00000013874	RIF1	71	70.732	Ficedula_albicollis
ENSTBEG00000016082	RIF1	82	87.261	ENSFDAG00000006538	RIF1	82	87.261	Fukomys_damarensis
ENSTBEG00000016082	RIF1	56	53.971	ENSFHEG00000013721	rif1	59	53.971	Fundulus_heteroclitus
ENSTBEG00000016082	RIF1	65	64.151	ENSGALG00000012484	RIF1	76	64.151	Gallus_gallus
ENSTBEG00000016082	RIF1	55	54.321	ENSGAFG00000017196	rif1	58	54.321	Gambusia_affinis
ENSTBEG00000016082	RIF1	53	73.913	ENSGACG00000008579	rif1	62	73.913	Gasterosteus_aculeatus
ENSTBEG00000016082	RIF1	71	68.519	ENSGAGG00000012595	RIF1	78	68.966	Gopherus_agassizii
ENSTBEG00000016082	RIF1	71	89.873	ENSGGOG00000040178	RIF1	78	89.873	Gorilla_gorilla
ENSTBEG00000016082	RIF1	58	62.651	ENSHBUG00000007125	rif1	63	62.651	Haplochromis_burtoni
ENSTBEG00000016082	RIF1	76	72.057	ENSHGLG00100009807	RIF1	80	72.057	Heterocephalus_glaber_male
ENSTBEG00000016082	RIF1	60	42.653	ENSHCOG00000015943	rif1	54	52.113	Hippocampus_comes
ENSTBEG00000016082	RIF1	58	54.375	ENSIPUG00000021703	rif1	59	54.508	Ictalurus_punctatus
ENSTBEG00000016082	RIF1	82	86.709	ENSSTOG00000020712	RIF1	83	86.709	Ictidomys_tridecemlineatus
ENSTBEG00000016082	RIF1	80	83.974	ENSJJAG00000023000	Rif1	80	83.974	Jaculus_jaculus
ENSTBEG00000016082	RIF1	60	45.570	ENSKMAG00000002852	rif1	64	45.570	Kryptolebias_marmoratus
ENSTBEG00000016082	RIF1	54	54.379	ENSLBEG00000023196	rif1	50	54.379	Labrus_bergylta
ENSTBEG00000016082	RIF1	57	60.494	ENSLACG00000005425	RIF1	72	60.494	Latimeria_chalumnae
ENSTBEG00000016082	RIF1	54	56.364	ENSLOCG00000002657	rif1	73	56.364	Lepisosteus_oculatus
ENSTBEG00000016082	RIF1	81	88.535	ENSLAFG00000009796	RIF1	83	88.535	Loxodonta_africana
ENSTBEG00000016082	RIF1	82	90.506	ENSMFAG00000032233	RIF1	83	90.506	Macaca_fascicularis
ENSTBEG00000016082	RIF1	82	90.506	ENSMMUG00000008611	RIF1	82	90.506	Macaca_mulatta
ENSTBEG00000016082	RIF1	82	90.506	ENSMNEG00000031616	RIF1	83	90.506	Macaca_nemestrina
ENSTBEG00000016082	RIF1	82	89.873	ENSMLEG00000042945	RIF1	83	89.873	Mandrillus_leucophaeus
ENSTBEG00000016082	RIF1	61	52.041	ENSMAMG00000001745	rif1	64	52.857	Mastacembelus_armatus
ENSTBEG00000016082	RIF1	58	51.724	ENSMZEG00005020920	rif1	63	51.724	Maylandia_zebra
ENSTBEG00000016082	RIF1	69	66.667	ENSMGAG00000012732	RIF1	77	66.667	Meleagris_gallopavo
ENSTBEG00000016082	RIF1	75	85.987	ENSMAUG00000013158	Rif1	79	85.987	Mesocricetus_auratus
ENSTBEG00000016082	RIF1	82	91.139	ENSMICG00000046127	RIF1	83	91.139	Microcebus_murinus
ENSTBEG00000016082	RIF1	82	85.350	ENSMOCG00000009381	Rif1	83	85.350	Microtus_ochrogaster
ENSTBEG00000016082	RIF1	59	65.854	ENSMMOG00000006519	rif1	60	65.854	Mola_mola
ENSTBEG00000016082	RIF1	75	76.582	ENSMODG00000003703	RIF1	77	76.582	Monodelphis_domestica
ENSTBEG00000016082	RIF1	51	47.403	ENSMALG00000016759	rif1	58	47.403	Monopterus_albus
ENSTBEG00000016082	RIF1	81	84.076	MGP_CAROLIEiJ_G0023555	Rif1	82	84.076	Mus_caroli
ENSTBEG00000016082	RIF1	81	82.803	ENSMUSG00000036202	Rif1	82	82.803	Mus_musculus
ENSTBEG00000016082	RIF1	81	85.350	MGP_PahariEiJ_G0025006	Rif1	81	85.350	Mus_pahari
ENSTBEG00000016082	RIF1	81	82.803	MGP_SPRETEiJ_G0024476	Rif1	82	82.803	Mus_spretus
ENSTBEG00000016082	RIF1	82	89.873	ENSMPUG00000000371	RIF1	82	89.873	Mustela_putorius_furo
ENSTBEG00000016082	RIF1	72	87.975	ENSMLUG00000003376	RIF1	80	88.535	Myotis_lucifugus
ENSTBEG00000016082	RIF1	81	83.544	ENSNGAG00000009268	Rif1	83	83.544	Nannospalax_galili
ENSTBEG00000016082	RIF1	53	54.303	ENSNBRG00000014257	rif1	58	53.521	Neolamprologus_brichardi
ENSTBEG00000016082	RIF1	81	86.076	ENSNLEG00000010955	RIF1	83	86.076	Nomascus_leucogenys
ENSTBEG00000016082	RIF1	55	75.648	ENSMEUG00000007601	-	60	75.648	Notamacropus_eugenii
ENSTBEG00000016082	RIF1	82	87.261	ENSODEG00000003950	RIF1	83	87.261	Octodon_degus
ENSTBEG00000016082	RIF1	59	51.724	ENSONIG00000013657	rif1	61	51.724	Oreochromis_niloticus
ENSTBEG00000016082	RIF1	67	61.635	ENSOANG00000006078	-	69	61.635	Ornithorhynchus_anatinus
ENSTBEG00000016082	RIF1	82	86.076	ENSOCUG00000017435	RIF1	82	86.076	Oryctolagus_cuniculus
ENSTBEG00000016082	RIF1	57	50.713	ENSORLG00020001302	rif1	63	50.713	Oryzias_latipes_hni
ENSTBEG00000016082	RIF1	54	50.713	ENSORLG00015000009	rif1	60	61.905	Oryzias_latipes_hsok
ENSTBEG00000016082	RIF1	53	51.210	ENSOMEG00000021513	rif1	58	51.210	Oryzias_melastigma
ENSTBEG00000016082	RIF1	82	89.809	ENSOGAG00000006141	RIF1	82	89.809	Otolemur_garnettii
ENSTBEG00000016082	RIF1	82	89.873	ENSOARG00000008930	RIF1	82	89.873	Ovis_aries
ENSTBEG00000016082	RIF1	82	87.975	ENSPPAG00000023754	RIF1	83	87.975	Pan_paniscus
ENSTBEG00000016082	RIF1	82	89.241	ENSPPRG00000003618	RIF1	83	89.241	Panthera_pardus
ENSTBEG00000016082	RIF1	82	89.241	ENSPTIG00000020652	RIF1	83	89.241	Panthera_tigris_altaica
ENSTBEG00000016082	RIF1	82	88.608	ENSPTRG00000012534	RIF1	83	88.608	Pan_troglodytes
ENSTBEG00000016082	RIF1	82	90.506	ENSPANG00000008525	RIF1	83	90.506	Papio_anubis
ENSTBEG00000016082	RIF1	55	56.133	ENSPKIG00000004267	rif1	60	56.426	Paramormyrops_kingsleyae
ENSTBEG00000016082	RIF1	54	53.673	ENSPMGG00000016141	rif1	65	53.673	Periophthalmus_magnuspinnatus
ENSTBEG00000016082	RIF1	81	85.350	ENSPEMG00000000446	Rif1	82	85.350	Peromyscus_maniculatus_bairdii
ENSTBEG00000016082	RIF1	74	77.707	ENSPCIG00000009185	RIF1	78	77.707	Phascolarctos_cinereus
ENSTBEG00000016082	RIF1	55	53.878	ENSPFOG00000017804	rif1	58	53.878	Poecilia_formosa
ENSTBEG00000016082	RIF1	50	43.396	ENSPFOG00000000554	-	60	53.963	Poecilia_formosa
ENSTBEG00000016082	RIF1	55	53.527	ENSPLAG00000017945	rif1	65	53.144	Poecilia_latipinna
ENSTBEG00000016082	RIF1	55	53.673	ENSPREG00000018052	rif1	59	53.673	Poecilia_reticulata
ENSTBEG00000016082	RIF1	81	88.608	ENSPPYG00000012846	RIF1	82	88.608	Pongo_abelii
ENSTBEG00000016082	RIF1	59	93.333	ENSPCAG00000009032	RIF1	60	93.333	Procavia_capensis
ENSTBEG00000016082	RIF1	82	91.772	ENSPCOG00000027888	RIF1	83	91.772	Propithecus_coquereli
ENSTBEG00000016082	RIF1	75	95.402	ENSPVAG00000014276	RIF1	78	95.402	Pteropus_vampyrus
ENSTBEG00000016082	RIF1	56	53.157	ENSPNYG00000012940	rif1	61	53.157	Pundamilia_nyererei
ENSTBEG00000016082	RIF1	57	53.846	ENSPNAG00000016685	rif1	58	54.268	Pygocentrus_nattereri
ENSTBEG00000016082	RIF1	82	84.713	ENSRNOG00000054901	Rif1	83	84.713	Rattus_norvegicus
ENSTBEG00000016082	RIF1	81	90.506	ENSRBIG00000003704	RIF1	83	90.506	Rhinopithecus_bieti
ENSTBEG00000016082	RIF1	81	89.873	ENSRROG00000028206	RIF1	83	89.873	Rhinopithecus_roxellana
ENSTBEG00000016082	RIF1	79	88.608	ENSSBOG00000029530	RIF1	83	88.608	Saimiri_boliviensis_boliviensis
ENSTBEG00000016082	RIF1	74	76.433	ENSSHAG00000018552	RIF1	76	76.433	Sarcophilus_harrisii
ENSTBEG00000016082	RIF1	55	64.286	ENSSFOG00015021539	rif1	61	64.286	Scleropages_formosus
ENSTBEG00000016082	RIF1	61	50.600	ENSSMAG00000011704	rif1	57	54.268	Scophthalmus_maximus
ENSTBEG00000016082	RIF1	58	54.175	ENSSDUG00000015632	rif1	66	54.175	Seriola_dumerili
ENSTBEG00000016082	RIF1	58	54.175	ENSSLDG00000019531	rif1	60	54.175	Seriola_lalandi_dorsalis
ENSTBEG00000016082	RIF1	72	66.667	ENSSPUG00000003062	RIF1	79	66.667	Sphenodon_punctatus
ENSTBEG00000016082	RIF1	82	92.405	ENSSSCG00000016395	RIF1	83	92.405	Sus_scrofa
ENSTBEG00000016082	RIF1	58	53.564	ENSTRUG00000015808	rif1	63	53.564	Takifugu_rubripes
ENSTBEG00000016082	RIF1	56	52.749	ENSTNIG00000011538	rif1	61	52.749	Tetraodon_nigroviridis
ENSTBEG00000016082	RIF1	82	91.139	ENSTTRG00000011190	RIF1	82	91.139	Tursiops_truncatus
ENSTBEG00000016082	RIF1	72	89.873	ENSUAMG00000026385	RIF1	80	89.873	Ursus_americanus
ENSTBEG00000016082	RIF1	82	90.506	ENSUMAG00000000337	RIF1	83	90.506	Ursus_maritimus
ENSTBEG00000016082	RIF1	82	90.506	ENSVPAG00000002162	RIF1	82	90.506	Vicugna_pacos
ENSTBEG00000016082	RIF1	82	89.241	ENSVVUG00000011293	RIF1	83	89.241	Vulpes_vulpes
ENSTBEG00000016082	RIF1	71	64.375	ENSXETG00000004530	rif1	71	64.375	Xenopus_tropicalis
ENSTBEG00000016082	RIF1	55	52.449	ENSXMAG00000000506	rif1	56	52.449	Xiphophorus_maculatus