EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000016482 (Gene tree)
Gene ID: -
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrscaffold_148473:152147-153295
Accession: 13629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000014310	RRM_5	PF13893.6	4.5e-12	1	2
ENSTBEP00000014310	RRM_5	PF13893.6	4.5e-12	2	2
ENSTBEP00000014310	RRM_1	PF00076.22	1.6e-78	1	4
ENSTBEP00000014310	RRM_1	PF00076.22	1.6e-78	2	4
ENSTBEP00000014310	RRM_1	PF00076.22	1.6e-78	3	4
ENSTBEP00000014310	RRM_1	PF00076.22	1.6e-78	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000016464	PABPC5-201	1149	-	ENSTBEP00000014310	382 (aa)	-	UPI0000F5F02D

Gene Model

Click here to download ENSTBEG00000016482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000016482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000016482	PABPC5	87	37.037	ENSTBEG00000011730	ELAVL4	59	37.037
ENSTBEG00000016482	PABPC5	57	35.616	ENSTBEG00000010130	CELF3	58	33.824
ENSTBEG00000016482	PABPC5	90	31.447	ENSTBEG00000002751	-	63	31.447
ENSTBEG00000016482	PABPC5	83	52.131	ENSTBEG00000009035	PABPC4	52	52.131

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000016482	PABPC5	99	98.163	ENSG00000174740	PABPC5	99	98.163	Homo_sapiens
ENSTBEG00000016482	PABPC5	99	97.900	ENSAMEG00000020114	PABPC5	100	97.900	Ailuropoda_melanoleuca
ENSTBEG00000016482	PABPC5	99	98.163	ENSANAG00000005063	PABPC5	99	98.163	Aotus_nancymaae
ENSTBEG00000016482	PABPC5	100	97.120	ENSBTAG00000019942	PABPC5	100	97.120	Bos_taurus
ENSTBEG00000016482	PABPC5	99	97.900	ENSCJAG00000003665	PABPC5	99	97.900	Callithrix_jacchus
ENSTBEG00000016482	PABPC5	100	97.382	ENSCAFG00000017452	PABPC5	100	97.382	Canis_familiaris
ENSTBEG00000016482	PABPC5	100	97.120	ENSCHIG00000019004	PABPC5	100	97.120	Capra_hircus
ENSTBEG00000016482	PABPC5	100	97.644	ENSTSYG00000036351	PABPC5	100	97.644	Carlito_syrichta
ENSTBEG00000016482	PABPC5	99	89.529	ENSCAPG00000010714	PABPC5	100	89.529	Cavia_aperea
ENSTBEG00000016482	PABPC5	100	95.026	ENSCPOG00000002555	PABPC5	100	95.026	Cavia_porcellus
ENSTBEG00000016482	PABPC5	99	98.163	ENSCCAG00000032154	PABPC5	99	98.163	Cebus_capucinus
ENSTBEG00000016482	PABPC5	99	98.425	ENSCATG00000043083	PABPC5	99	98.425	Cercocebus_atys
ENSTBEG00000016482	PABPC5	100	96.335	ENSCLAG00000000647	PABPC5	100	96.335	Chinchilla_lanigera
ENSTBEG00000016482	PABPC5	99	98.425	ENSCSAG00000000065	PABPC5	99	98.425	Chlorocebus_sabaeus
ENSTBEG00000016482	PABPC5	99	98.425	ENSCANG00000011473	PABPC5	99	98.425	Colobus_angolensis_palliatus
ENSTBEG00000016482	PABPC5	100	94.764	ENSCGRG00000018699	Pabpc5	100	94.764	Cricetulus_griseus_crigri
ENSTBEG00000016482	PABPC5	100	78.590	ENSETEG00000011832	PABPC5	100	78.590	Echinops_telfairi
ENSTBEG00000016482	PABPC5	100	97.906	ENSEASG00005014396	PABPC5	100	97.906	Equus_asinus_asinus
ENSTBEG00000016482	PABPC5	100	97.906	ENSECAG00000003452	PABPC5	100	97.906	Equus_caballus
ENSTBEG00000016482	PABPC5	100	97.644	ENSFCAG00000004998	PABPC5	100	97.644	Felis_catus
ENSTBEG00000016482	PABPC5	100	97.382	ENSFDAG00000000126	PABPC5	100	97.382	Fukomys_damarensis
ENSTBEG00000016482	PABPC5	99	98.163	ENSGGOG00000007622	PABPC5	99	98.163	Gorilla_gorilla
ENSTBEG00000016482	PABPC5	95	98.165	ENSJJAG00000011960	Pabpc5	100	98.165	Jaculus_jaculus
ENSTBEG00000016482	PABPC5	99	98.425	ENSMFAG00000024561	PABPC5	99	98.425	Macaca_fascicularis
ENSTBEG00000016482	PABPC5	99	98.425	ENSMMUG00000011562	PABPC5	99	98.425	Macaca_mulatta
ENSTBEG00000016482	PABPC5	99	98.425	ENSMNEG00000037604	PABPC5	99	98.425	Macaca_nemestrina
ENSTBEG00000016482	PABPC5	99	98.425	ENSMLEG00000028318	PABPC5	99	98.425	Mandrillus_leucophaeus
ENSTBEG00000016482	PABPC5	100	96.859	ENSMICG00000041706	PABPC5	100	96.859	Microcebus_murinus
ENSTBEG00000016482	PABPC5	100	96.597	ENSMOCG00000001554	Pabpc5	100	96.597	Microtus_ochrogaster
ENSTBEG00000016482	PABPC5	99	94.474	MGP_CAROLIEiJ_G0033367	Pabpc5	99	94.474	Mus_caroli
ENSTBEG00000016482	PABPC5	99	95.000	ENSMUSG00000034732	Pabpc5	99	95.000	Mus_musculus
ENSTBEG00000016482	PABPC5	100	95.288	MGP_PahariEiJ_G0031908	Pabpc5	100	95.288	Mus_pahari
ENSTBEG00000016482	PABPC5	99	95.000	MGP_SPRETEiJ_G0034533	Pabpc5	99	95.000	Mus_spretus
ENSTBEG00000016482	PABPC5	100	96.859	ENSMPUG00000018465	PABPC5	100	96.859	Mustela_putorius_furo
ENSTBEG00000016482	PABPC5	100	96.335	ENSMLUG00000008244	PABPC5	100	96.335	Myotis_lucifugus
ENSTBEG00000016482	PABPC5	95	97.248	ENSNGAG00000004371	Pabpc5	100	97.248	Nannospalax_galili
ENSTBEG00000016482	PABPC5	99	98.163	ENSNLEG00000035086	PABPC5	99	98.163	Nomascus_leucogenys
ENSTBEG00000016482	PABPC5	98	98.643	ENSOPRG00000000856	PABPC5	100	98.643	Ochotona_princeps
ENSTBEG00000016482	PABPC5	100	97.906	ENSOCUG00000010919	PABPC5	100	97.906	Oryctolagus_cuniculus
ENSTBEG00000016482	PABPC5	100	97.120	ENSOGAG00000006882	PABPC5	100	97.120	Otolemur_garnettii
ENSTBEG00000016482	PABPC5	100	97.382	ENSOARG00000010260	PABPC5	100	97.382	Ovis_aries
ENSTBEG00000016482	PABPC5	99	97.900	ENSPPAG00000007378	PABPC5	99	97.900	Pan_paniscus
ENSTBEG00000016482	PABPC5	100	97.644	ENSPPRG00000010742	PABPC5	100	97.644	Panthera_pardus
ENSTBEG00000016482	PABPC5	100	97.644	ENSPTIG00000001480	PABPC5	100	97.644	Panthera_tigris_altaica
ENSTBEG00000016482	PABPC5	99	98.163	ENSPTRG00000022078	PABPC5	99	98.163	Pan_troglodytes
ENSTBEG00000016482	PABPC5	99	98.425	ENSPANG00000018282	PABPC5	99	98.425	Papio_anubis
ENSTBEG00000016482	PABPC5	100	95.550	ENSPEMG00000000171	Pabpc5	100	95.550	Peromyscus_maniculatus_bairdii
ENSTBEG00000016482	PABPC5	99	98.163	ENSPPYG00000020526	PABPC5	99	98.163	Pongo_abelii
ENSTBEG00000016482	PABPC5	99	97.455	ENSPCAG00000015577	PABPC5	100	97.455	Procavia_capensis
ENSTBEG00000016482	PABPC5	100	97.644	ENSPCOG00000000676	PABPC5	100	97.644	Propithecus_coquereli
ENSTBEG00000016482	PABPC5	100	97.644	ENSPVAG00000006465	PABPC5	100	97.644	Pteropus_vampyrus
ENSTBEG00000016482	PABPC5	100	95.550	ENSRNOG00000003354	Pabpc5	100	95.550	Rattus_norvegicus
ENSTBEG00000016482	PABPC5	99	98.425	ENSRBIG00000011760	PABPC5	99	98.425	Rhinopithecus_bieti
ENSTBEG00000016482	PABPC5	99	98.425	ENSRROG00000036708	PABPC5	99	98.425	Rhinopithecus_roxellana
ENSTBEG00000016482	PABPC5	99	97.900	ENSSBOG00000008658	PABPC5	99	97.900	Saimiri_boliviensis_boliviensis
ENSTBEG00000016482	PABPC5	100	95.288	ENSSARG00000014012	PABPC5	100	95.288	Sorex_araneus
ENSTBEG00000016482	PABPC5	100	97.644	ENSSSCG00000040194	PABPC5	100	97.644	Sus_scrofa
ENSTBEG00000016482	PABPC5	100	97.382	ENSUAMG00000013627	PABPC5	100	97.382	Ursus_americanus
ENSTBEG00000016482	PABPC5	100	97.120	ENSUMAG00000023934	PABPC5	100	97.120	Ursus_maritimus
ENSTBEG00000016482	PABPC5	100	97.382	ENSVPAG00000001063	PABPC5	100	97.382	Vicugna_pacos
ENSTBEG00000016482	PABPC5	100	97.644	ENSVVUG00000013172	PABPC5	100	97.644	Vulpes_vulpes