EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000016559 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 45961 bases
Position: chrGeneScaffold_5938:487151-533111
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000014395	MRP-S27	PF10037.9	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000016559	PTCD2-201	1167	-	ENSTBEP00000014395	388 (aa)	-	UPI0000F6091E

Gene Model

Click here to download ENSTBEG00000016559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000016559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000016559	PTCD2	99	78.497	ENSG00000049883	PTCD2	99	78.497	Homo_sapiens
ENSTBEG00000016559	PTCD2	90	45.690	ENSAPOG00000020682	ptcd2	91	45.690	Acanthochromis_polyacanthus
ENSTBEG00000016559	PTCD2	100	76.289	ENSAMEG00000007194	PTCD2	100	76.289	Ailuropoda_melanoleuca
ENSTBEG00000016559	PTCD2	89	40.974	ENSACIG00000002053	ptcd2	100	40.974	Amphilophus_citrinellus
ENSTBEG00000016559	PTCD2	98	42.670	ENSAOCG00000006616	ptcd2	95	42.670	Amphiprion_ocellaris
ENSTBEG00000016559	PTCD2	90	44.857	ENSAPEG00000022926	ptcd2	89	44.857	Amphiprion_percula
ENSTBEG00000016559	PTCD2	97	54.255	ENSACAG00000009747	PTCD2	96	54.255	Anolis_carolinensis
ENSTBEG00000016559	PTCD2	99	77.979	ENSANAG00000029353	PTCD2	99	77.778	Aotus_nancymaae
ENSTBEG00000016559	PTCD2	98	42.298	ENSACLG00000027742	ptcd2	95	42.298	Astatotilapia_calliptera
ENSTBEG00000016559	PTCD2	85	42.988	ENSAMXG00000029404	ptcd2	88	42.988	Astyanax_mexicanus
ENSTBEG00000016559	PTCD2	99	77.604	ENSBTAG00000014675	PTCD2	100	77.604	Bos_taurus
ENSTBEG00000016559	PTCD2	99	77.202	ENSCJAG00000016364	PTCD2	99	77.202	Callithrix_jacchus
ENSTBEG00000016559	PTCD2	99	74.286	ENSCAFG00000007982	PTCD2	90	74.286	Canis_familiaris
ENSTBEG00000016559	PTCD2	89	76.879	ENSCAFG00020019147	PTCD2	97	76.879	Canis_lupus_dingo
ENSTBEG00000016559	PTCD2	99	78.906	ENSCHIG00000017118	PTCD2	100	78.906	Capra_hircus
ENSTBEG00000016559	PTCD2	99	70.496	ENSCPOG00000040168	PTCD2	100	70.496	Cavia_porcellus
ENSTBEG00000016559	PTCD2	77	77.104	ENSCCAG00000021996	-	90	77.474	Cebus_capucinus
ENSTBEG00000016559	PTCD2	99	76.425	ENSCCAG00000029389	-	99	76.227	Cebus_capucinus
ENSTBEG00000016559	PTCD2	99	75.979	ENSCATG00000019069	PTCD2	100	75.979	Cercocebus_atys
ENSTBEG00000016559	PTCD2	99	70.496	ENSCLAG00000000072	PTCD2	100	70.496	Chinchilla_lanigera
ENSTBEG00000016559	PTCD2	99	76.762	ENSCSAG00000015623	PTCD2	100	76.762	Chlorocebus_sabaeus
ENSTBEG00000016559	PTCD2	89	55.172	ENSCHOG00000010634	PTCD2	100	54.598	Choloepus_hoffmanni
ENSTBEG00000016559	PTCD2	99	51.671	ENSCPBG00000000216	PTCD2	99	51.671	Chrysemys_picta_bellii
ENSTBEG00000016559	PTCD2	99	75.907	ENSCANG00000035636	PTCD2	99	75.907	Colobus_angolensis_palliatus
ENSTBEG00000016559	PTCD2	99	70.284	ENSCGRG00001015289	Ptcd2	84	70.284	Cricetulus_griseus_chok1gshd
ENSTBEG00000016559	PTCD2	99	70.284	ENSCGRG00000006193	Ptcd2	84	70.284	Cricetulus_griseus_crigri
ENSTBEG00000016559	PTCD2	90	43.590	ENSCVAG00000001285	ptcd2	90	43.590	Cyprinodon_variegatus
ENSTBEG00000016559	PTCD2	97	42.971	ENSDARG00000035391	ptcd2	98	42.971	Danio_rerio
ENSTBEG00000016559	PTCD2	99	73.890	ENSDNOG00000008719	PTCD2	100	73.890	Dasypus_novemcinctus
ENSTBEG00000016559	PTCD2	99	74.419	ENSDORG00000004921	Ptcd2	100	74.419	Dipodomys_ordii
ENSTBEG00000016559	PTCD2	100	65.296	ENSETEG00000016542	PTCD2	99	65.464	Echinops_telfairi
ENSTBEG00000016559	PTCD2	99	75.979	ENSEASG00005018038	PTCD2	100	75.979	Equus_asinus_asinus
ENSTBEG00000016559	PTCD2	99	75.781	ENSECAG00000007022	PTCD2	99	75.781	Equus_caballus
ENSTBEG00000016559	PTCD2	99	68.229	ENSEEUG00000014031	PTCD2	99	68.229	Erinaceus_europaeus
ENSTBEG00000016559	PTCD2	93	48.056	ENSELUG00000003584	ptcd2	94	48.056	Esox_lucius
ENSTBEG00000016559	PTCD2	99	69.509	ENSFCAG00000045432	PTCD2	83	69.509	Felis_catus
ENSTBEG00000016559	PTCD2	84	49.541	ENSFALG00000010299	PTCD2	99	49.541	Ficedula_albicollis
ENSTBEG00000016559	PTCD2	99	73.368	ENSFDAG00000018461	PTCD2	100	73.368	Fukomys_damarensis
ENSTBEG00000016559	PTCD2	90	48.148	ENSGMOG00000003637	ptcd2	91	48.148	Gadus_morhua
ENSTBEG00000016559	PTCD2	91	49.292	ENSGALG00000038260	PTCD2	99	47.656	Gallus_gallus
ENSTBEG00000016559	PTCD2	93	58.011	ENSGAGG00000021952	PTCD2	92	58.011	Gopherus_agassizii
ENSTBEG00000016559	PTCD2	99	78.756	ENSGGOG00000010695	PTCD2	99	78.756	Gorilla_gorilla
ENSTBEG00000016559	PTCD2	98	42.298	ENSHBUG00000009191	ptcd2	95	42.298	Haplochromis_burtoni
ENSTBEG00000016559	PTCD2	99	72.063	ENSHGLG00000001234	PTCD2	100	72.063	Heterocephalus_glaber_female
ENSTBEG00000016559	PTCD2	99	72.324	ENSHGLG00100015419	PTCD2	100	72.324	Heterocephalus_glaber_male
ENSTBEG00000016559	PTCD2	90	46.552	ENSHCOG00000001703	ptcd2	90	46.552	Hippocampus_comes
ENSTBEG00000016559	PTCD2	90	41.761	ENSIPUG00000006080	ptcd2	97	41.444	Ictalurus_punctatus
ENSTBEG00000016559	PTCD2	98	75.526	ENSSTOG00000006596	PTCD2	99	75.526	Ictidomys_tridecemlineatus
ENSTBEG00000016559	PTCD2	99	73.368	ENSJJAG00000024388	Ptcd2	100	73.368	Jaculus_jaculus
ENSTBEG00000016559	PTCD2	93	40.947	ENSKMAG00000009329	ptcd2	93	40.947	Kryptolebias_marmoratus
ENSTBEG00000016559	PTCD2	97	43.501	ENSLBEG00000024871	ptcd2	94	43.501	Labrus_bergylta
ENSTBEG00000016559	PTCD2	99	50.781	ENSLOCG00000011122	ptcd2	99	50.781	Lepisosteus_oculatus
ENSTBEG00000016559	PTCD2	76	80.205	ENSLAFG00000004115	PTCD2	94	80.205	Loxodonta_africana
ENSTBEG00000016559	PTCD2	99	75.648	ENSMFAG00000031516	PTCD2	99	75.648	Macaca_fascicularis
ENSTBEG00000016559	PTCD2	99	75.457	ENSMNEG00000007537	PTCD2	100	75.457	Macaca_nemestrina
ENSTBEG00000016559	PTCD2	99	75.907	ENSMLEG00000031093	PTCD2	99	75.907	Mandrillus_leucophaeus
ENSTBEG00000016559	PTCD2	90	45.977	ENSMAMG00000018529	ptcd2	91	45.977	Mastacembelus_armatus
ENSTBEG00000016559	PTCD2	98	42.298	ENSMZEG00005003625	ptcd2	95	42.298	Maylandia_zebra
ENSTBEG00000016559	PTCD2	90	49.425	ENSMGAG00000005033	PTCD2	100	49.425	Meleagris_gallopavo
ENSTBEG00000016559	PTCD2	99	54.830	ENSMAUG00000020253	Ptcd2	100	54.830	Mesocricetus_auratus
ENSTBEG00000016559	PTCD2	100	76.289	ENSMICG00000004535	PTCD2	100	76.289	Microcebus_murinus
ENSTBEG00000016559	PTCD2	99	71.540	ENSMOCG00000019985	Ptcd2	100	71.540	Microtus_ochrogaster
ENSTBEG00000016559	PTCD2	91	57.507	ENSMODG00000001695	PTCD2	92	57.507	Monodelphis_domestica
ENSTBEG00000016559	PTCD2	90	45.690	ENSMALG00000022372	ptcd2	91	45.690	Monopterus_albus
ENSTBEG00000016559	PTCD2	99	69.713	MGP_CAROLIEiJ_G0018829	Ptcd2	100	69.713	Mus_caroli
ENSTBEG00000016559	PTCD2	99	68.668	ENSMUSG00000021650	Ptcd2	100	68.668	Mus_musculus
ENSTBEG00000016559	PTCD2	99	71.018	MGP_PahariEiJ_G0015904	Ptcd2	100	71.018	Mus_pahari
ENSTBEG00000016559	PTCD2	99	69.191	MGP_SPRETEiJ_G0019711	Ptcd2	100	69.191	Mus_spretus
ENSTBEG00000016559	PTCD2	99	77.285	ENSMPUG00000014401	PTCD2	100	77.285	Mustela_putorius_furo
ENSTBEG00000016559	PTCD2	99	75.711	ENSMLUG00000007374	PTCD2	99	75.711	Myotis_lucifugus
ENSTBEG00000016559	PTCD2	99	71.279	ENSNGAG00000005027	Ptcd2	100	71.279	Nannospalax_galili
ENSTBEG00000016559	PTCD2	85	44.910	ENSNBRG00000000092	-	100	44.910	Neolamprologus_brichardi
ENSTBEG00000016559	PTCD2	98	42.820	ENSNBRG00000008174	ptcd2	97	42.820	Neolamprologus_brichardi
ENSTBEG00000016559	PTCD2	99	78.756	ENSNLEG00000004516	PTCD2	99	78.756	Nomascus_leucogenys
ENSTBEG00000016559	PTCD2	100	49.105	ENSMEUG00000014012	-	100	49.105	Notamacropus_eugenii
ENSTBEG00000016559	PTCD2	99	72.093	ENSOPRG00000007290	PTCD2	99	72.093	Ochotona_princeps
ENSTBEG00000016559	PTCD2	99	72.585	ENSODEG00000016417	PTCD2	100	72.585	Octodon_degus
ENSTBEG00000016559	PTCD2	75	46.897	ENSONIG00000011269	ptcd2	82	46.897	Oreochromis_niloticus
ENSTBEG00000016559	PTCD2	94	76.986	ENSOCUG00000007970	PTCD2	100	76.240	Oryctolagus_cuniculus
ENSTBEG00000016559	PTCD2	89	45.892	ENSORLG00000003851	ptcd2	88	45.665	Oryzias_latipes
ENSTBEG00000016559	PTCD2	89	45.609	ENSORLG00020009823	ptcd2	90	45.376	Oryzias_latipes_hni
ENSTBEG00000016559	PTCD2	89	44.759	ENSORLG00015016777	ptcd2	99	44.798	Oryzias_latipes_hsok
ENSTBEG00000016559	PTCD2	89	43.353	ENSOMEG00000012396	ptcd2	84	43.353	Oryzias_melastigma
ENSTBEG00000016559	PTCD2	100	72.680	ENSOGAG00000008390	PTCD2	100	72.680	Otolemur_garnettii
ENSTBEG00000016559	PTCD2	99	78.351	ENSOARG00000005087	PTCD2	99	78.351	Ovis_aries
ENSTBEG00000016559	PTCD2	99	78.756	ENSPPAG00000028480	PTCD2	99	78.756	Pan_paniscus
ENSTBEG00000016559	PTCD2	99	78.497	ENSPTRG00000016968	PTCD2	99	78.497	Pan_troglodytes
ENSTBEG00000016559	PTCD2	89	77.681	ENSPANG00000006611	PTCD2	89	77.681	Papio_anubis
ENSTBEG00000016559	PTCD2	91	46.518	ENSPKIG00000019896	ptcd2	93	46.518	Paramormyrops_kingsleyae
ENSTBEG00000016559	PTCD2	82	58.675	ENSPSIG00000014559	PTCD2	98	58.675	Pelodiscus_sinensis
ENSTBEG00000016559	PTCD2	99	71.688	ENSPEMG00000000884	Ptcd2	100	71.688	Peromyscus_maniculatus_bairdii
ENSTBEG00000016559	PTCD2	98	57.853	ENSPCIG00000029047	PTCD2	99	57.853	Phascolarctos_cinereus
ENSTBEG00000016559	PTCD2	90	43.875	ENSPLAG00000010456	ptcd2	91	43.875	Poecilia_latipinna
ENSTBEG00000016559	PTCD2	90	44.160	ENSPREG00000021797	ptcd2	89	44.160	Poecilia_reticulata
ENSTBEG00000016559	PTCD2	100	67.784	ENSPPYG00000015543	PTCD2	100	67.784	Pongo_abelii
ENSTBEG00000016559	PTCD2	77	64.765	ENSPCAG00000006806	PTCD2	95	64.765	Procavia_capensis
ENSTBEG00000016559	PTCD2	99	74.677	ENSPVAG00000010935	PTCD2	99	74.677	Pteropus_vampyrus
ENSTBEG00000016559	PTCD2	98	42.298	ENSPNYG00000003122	ptcd2	95	42.298	Pundamilia_nyererei
ENSTBEG00000016559	PTCD2	93	46.685	ENSPNAG00000021490	ptcd2	94	46.685	Pygocentrus_nattereri
ENSTBEG00000016559	PTCD2	99	71.018	ENSRNOG00000028403	Ptcd2	100	71.018	Rattus_norvegicus
ENSTBEG00000016559	PTCD2	99	72.021	ENSRBIG00000032929	PTCD2	99	72.021	Rhinopithecus_bieti
ENSTBEG00000016559	PTCD2	99	76.240	ENSRROG00000000080	PTCD2	100	76.240	Rhinopithecus_roxellana
ENSTBEG00000016559	PTCD2	99	75.718	ENSSBOG00000018911	PTCD2	100	75.718	Saimiri_boliviensis_boliviensis
ENSTBEG00000016559	PTCD2	98	56.693	ENSSHAG00000003833	PTCD2	98	56.693	Sarcophilus_harrisii
ENSTBEG00000016559	PTCD2	94	44.110	ENSSFOG00015015415	ptcd2	93	44.444	Scleropages_formosus
ENSTBEG00000016559	PTCD2	89	40.922	ENSSMAG00000010350	ptcd2	90	40.922	Scophthalmus_maximus
ENSTBEG00000016559	PTCD2	89	46.398	ENSSDUG00000008142	ptcd2	87	46.398	Seriola_dumerili
ENSTBEG00000016559	PTCD2	89	46.686	ENSSLDG00000015284	ptcd2	91	46.686	Seriola_lalandi_dorsalis
ENSTBEG00000016559	PTCD2	77	68.013	ENSSARG00000004983	PTCD2	95	68.013	Sorex_araneus
ENSTBEG00000016559	PTCD2	99	50.392	ENSSPUG00000000176	PTCD2	96	50.392	Sphenodon_punctatus
ENSTBEG00000016559	PTCD2	90	44.540	ENSSPAG00000008591	ptcd2	89	44.540	Stegastes_partitus
ENSTBEG00000016559	PTCD2	99	77.003	ENSSSCG00000016975	PTCD2	91	77.003	Sus_scrofa
ENSTBEG00000016559	PTCD2	85	51.515	ENSTGUG00000005705	PTCD2	95	51.515	Taeniopygia_guttata
ENSTBEG00000016559	PTCD2	100	77.121	ENSTTRG00000011851	PTCD2	100	77.121	Tursiops_truncatus
ENSTBEG00000016559	PTCD2	100	75.515	ENSUAMG00000007583	PTCD2	91	75.515	Ursus_americanus
ENSTBEG00000016559	PTCD2	99	75.979	ENSUMAG00000007666	PTCD2	100	75.979	Ursus_maritimus
ENSTBEG00000016559	PTCD2	99	76.546	ENSVPAG00000009597	PTCD2	99	76.546	Vicugna_pacos
ENSTBEG00000016559	PTCD2	99	74.935	ENSVVUG00000007299	-	100	74.935	Vulpes_vulpes
ENSTBEG00000016559	PTCD2	93	51.247	ENSXETG00000031652	PTCD2	94	51.247	Xenopus_tropicalis
ENSTBEG00000016559	PTCD2	90	43.305	ENSXMAG00000005940	ptcd2	83	43.305	Xiphophorus_maculatus