EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000016602 (Gene tree)
Gene ID: -
Gene Symbol: LSM7
Alias: YNL147W
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 210 bases
Position: chrscaffold_49011:1246-1455
Accession: 20470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000014422	LSM	PF01423.22	6.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000016587	LSM7-201	210	-	ENSTBEP00000014422	69 (aa)	-	UPI0000F5D21A

Gene Model

Click here to download ENSTBEG00000016602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000016602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000016602	LSM7	100	87.143	ENSG00000130332	LSM7	100	85.714	Homo_sapiens
ENSTBEG00000016602	LSM7	96	82.090	ENSAPOG00000015573	lsm7	58	82.090	Acanthochromis_polyacanthus
ENSTBEG00000016602	LSM7	100	87.143	ENSAMEG00000005484	LSM7	68	87.143	Ailuropoda_melanoleuca
ENSTBEG00000016602	LSM7	94	83.333	ENSACIG00000006498	lsm7	52	83.333	Amphilophus_citrinellus
ENSTBEG00000016602	LSM7	100	82.857	ENSAOCG00000001077	lsm7	64	82.857	Amphiprion_ocellaris
ENSTBEG00000016602	LSM7	100	82.857	ENSAPEG00000024447	lsm7	64	82.857	Amphiprion_percula
ENSTBEG00000016602	LSM7	100	82.857	ENSAPEG00000000694	lsm7	68	82.857	Amphiprion_percula
ENSTBEG00000016602	LSM7	100	82.857	ENSATEG00000008557	lsm7	68	82.857	Anabas_testudineus
ENSTBEG00000016602	LSM7	100	76.812	ENSANAG00000022222	-	66	76.812	Aotus_nancymaae
ENSTBEG00000016602	LSM7	100	87.143	ENSANAG00000037196	-	68	87.143	Aotus_nancymaae
ENSTBEG00000016602	LSM7	100	82.857	ENSACLG00000021021	lsm7	68	82.857	Astatotilapia_calliptera
ENSTBEG00000016602	LSM7	100	82.857	ENSAMXG00000037622	lsm7	68	82.857	Astyanax_mexicanus
ENSTBEG00000016602	LSM7	100	87.143	ENSBTAG00000004521	LSM7	68	87.143	Bos_taurus
ENSTBEG00000016602	LSM7	99	44.928	WBGene00003081	lsm-7	66	44.928	Caenorhabditis_elegans
ENSTBEG00000016602	LSM7	100	87.143	ENSCAFG00000019409	LSM7	68	87.143	Canis_familiaris
ENSTBEG00000016602	LSM7	100	87.143	ENSCAFG00020018168	LSM7	51	87.143	Canis_lupus_dingo
ENSTBEG00000016602	LSM7	100	87.143	ENSCHIG00000023663	LSM7	68	87.143	Capra_hircus
ENSTBEG00000016602	LSM7	100	87.143	ENSCAPG00000014534	LSM7	99	87.143	Cavia_aperea
ENSTBEG00000016602	LSM7	100	87.143	ENSCPOG00000014025	LSM7	69	87.143	Cavia_porcellus
ENSTBEG00000016602	LSM7	100	87.143	ENSCCAG00000035456	LSM7	69	87.143	Cebus_capucinus
ENSTBEG00000016602	LSM7	100	87.143	ENSCATG00000023543	LSM7	68	87.143	Cercocebus_atys
ENSTBEG00000016602	LSM7	100	87.143	ENSCLAG00000011635	LSM7	68	87.143	Chinchilla_lanigera
ENSTBEG00000016602	LSM7	100	87.143	ENSCSAG00000011599	LSM7	68	87.143	Chlorocebus_sabaeus
ENSTBEG00000016602	LSM7	100	82.857	ENSCPBG00000021317	LSM7	74	82.857	Chrysemys_picta_bellii
ENSTBEG00000016602	LSM7	96	71.642	ENSCING00000022134	-	68	71.642	Ciona_intestinalis
ENSTBEG00000016602	LSM7	100	87.143	ENSCANG00000035525	LSM7	68	87.143	Colobus_angolensis_palliatus
ENSTBEG00000016602	LSM7	84	77.966	ENSCGRG00001016005	-	59	77.966	Cricetulus_griseus_chok1gshd
ENSTBEG00000016602	LSM7	100	87.143	ENSCGRG00001000807	-	68	87.143	Cricetulus_griseus_chok1gshd
ENSTBEG00000016602	LSM7	100	87.143	ENSCGRG00000014355	-	67	87.143	Cricetulus_griseus_crigri
ENSTBEG00000016602	LSM7	84	77.966	ENSCGRG00000006821	-	59	77.966	Cricetulus_griseus_crigri
ENSTBEG00000016602	LSM7	100	82.857	ENSCSEG00000014900	lsm7	59	82.857	Cynoglossus_semilaevis
ENSTBEG00000016602	LSM7	100	82.857	ENSCVAG00000021091	lsm7	65	82.857	Cyprinodon_variegatus
ENSTBEG00000016602	LSM7	100	84.286	ENSDARG00000058328	lsm7	68	84.286	Danio_rerio
ENSTBEG00000016602	LSM7	100	85.714	ENSDORG00000024460	Lsm7	69	85.714	Dipodomys_ordii
ENSTBEG00000016602	LSM7	96	63.235	FBgn0261068	LSm7	62	63.235	Drosophila_melanogaster
ENSTBEG00000016602	LSM7	100	85.714	ENSETEG00000012788	LSM7	69	85.714	Echinops_telfairi
ENSTBEG00000016602	LSM7	99	76.812	ENSEBUG00000016992	lsm7	66	76.812	Eptatretus_burgeri
ENSTBEG00000016602	LSM7	90	55.556	ENSEBUG00000010470	-	59	55.556	Eptatretus_burgeri
ENSTBEG00000016602	LSM7	100	87.143	ENSFCAG00000003445	LSM7	68	87.143	Felis_catus
ENSTBEG00000016602	LSM7	100	82.857	ENSFALG00000011912	LSM7	69	82.857	Ficedula_albicollis
ENSTBEG00000016602	LSM7	100	87.143	ENSFDAG00000007661	LSM7	73	87.143	Fukomys_damarensis
ENSTBEG00000016602	LSM7	100	82.857	ENSFHEG00000006349	lsm7	63	82.857	Fundulus_heteroclitus
ENSTBEG00000016602	LSM7	100	81.429	ENSGMOG00000013320	lsm7	68	81.429	Gadus_morhua
ENSTBEG00000016602	LSM7	100	82.857	ENSGAFG00000013902	lsm7	68	82.857	Gambusia_affinis
ENSTBEG00000016602	LSM7	100	82.857	ENSGACG00000010390	lsm7	68	82.857	Gasterosteus_aculeatus
ENSTBEG00000016602	LSM7	100	87.143	ENSGGOG00000010172	LSM7	68	87.143	Gorilla_gorilla
ENSTBEG00000016602	LSM7	100	82.857	ENSHBUG00000004616	lsm7	68	82.857	Haplochromis_burtoni
ENSTBEG00000016602	LSM7	100	87.143	ENSHGLG00000010587	LSM7	68	87.143	Heterocephalus_glaber_female
ENSTBEG00000016602	LSM7	100	87.143	ENSHGLG00100000852	LSM7	68	87.143	Heterocephalus_glaber_male
ENSTBEG00000016602	LSM7	100	82.857	ENSHCOG00000020252	lsm7	69	82.857	Hippocampus_comes
ENSTBEG00000016602	LSM7	100	82.857	ENSIPUG00000024724	lsm7	68	82.857	Ictalurus_punctatus
ENSTBEG00000016602	LSM7	100	87.143	ENSSTOG00000028372	LSM7	69	87.143	Ictidomys_tridecemlineatus
ENSTBEG00000016602	LSM7	100	85.714	ENSJJAG00000001936	Lsm7	68	85.714	Jaculus_jaculus
ENSTBEG00000016602	LSM7	100	82.857	ENSKMAG00000022151	lsm7	68	82.857	Kryptolebias_marmoratus
ENSTBEG00000016602	LSM7	100	82.857	ENSLBEG00000005203	lsm7	68	82.857	Labrus_bergylta
ENSTBEG00000016602	LSM7	100	85.714	ENSLACG00000015700	LSM7	68	85.714	Latimeria_chalumnae
ENSTBEG00000016602	LSM7	100	85.714	ENSLOCG00000004356	lsm7	68	85.714	Lepisosteus_oculatus
ENSTBEG00000016602	LSM7	100	87.143	ENSLAFG00000029302	LSM7	68	87.143	Loxodonta_africana
ENSTBEG00000016602	LSM7	100	87.143	ENSMFAG00000044572	LSM7	68	87.143	Macaca_fascicularis
ENSTBEG00000016602	LSM7	100	87.143	ENSMMUG00000000452	LSM7	69	87.143	Macaca_mulatta
ENSTBEG00000016602	LSM7	100	87.143	ENSMNEG00000004393	LSM7	68	87.143	Macaca_nemestrina
ENSTBEG00000016602	LSM7	100	87.143	ENSMLEG00000030852	LSM7	69	87.143	Mandrillus_leucophaeus
ENSTBEG00000016602	LSM7	100	82.857	ENSMAMG00000005410	lsm7	68	82.857	Mastacembelus_armatus
ENSTBEG00000016602	LSM7	100	82.857	ENSMZEG00005028055	lsm7	68	82.857	Maylandia_zebra
ENSTBEG00000016602	LSM7	100	84.286	ENSMGAG00000000750	LSM7	60	84.286	Meleagris_gallopavo
ENSTBEG00000016602	LSM7	100	87.143	ENSMAUG00000009276	Lsm7	68	87.143	Mesocricetus_auratus
ENSTBEG00000016602	LSM7	100	87.143	ENSMICG00000028619	-	68	87.143	Microcebus_murinus
ENSTBEG00000016602	LSM7	100	87.143	ENSMICG00000009988	-	68	87.143	Microcebus_murinus
ENSTBEG00000016602	LSM7	100	87.143	ENSMOCG00000016925	Lsm7	68	87.143	Microtus_ochrogaster
ENSTBEG00000016602	LSM7	100	82.857	ENSMMOG00000019645	lsm7	67	82.857	Mola_mola
ENSTBEG00000016602	LSM7	100	85.714	ENSMODG00000004722	LSM7	68	85.714	Monodelphis_domestica
ENSTBEG00000016602	LSM7	100	82.857	ENSMALG00000014511	lsm7	54	82.857	Monopterus_albus
ENSTBEG00000016602	LSM7	99	86.957	MGP_CAROLIEiJ_G0015607	Lsm7	67	86.957	Mus_caroli
ENSTBEG00000016602	LSM7	99	86.957	ENSMUSG00000035215	Lsm7	67	86.957	Mus_musculus
ENSTBEG00000016602	LSM7	99	86.957	MGP_PahariEiJ_G0031020	Lsm7	67	86.957	Mus_pahari
ENSTBEG00000016602	LSM7	99	86.957	MGP_SPRETEiJ_G0016425	Lsm7	67	86.957	Mus_spretus
ENSTBEG00000016602	LSM7	99	79.710	ENSMLUG00000024002	-	64	79.710	Myotis_lucifugus
ENSTBEG00000016602	LSM7	100	85.714	ENSMLUG00000013097	-	68	85.714	Myotis_lucifugus
ENSTBEG00000016602	LSM7	100	85.714	ENSNGAG00000021637	Lsm7	68	85.714	Nannospalax_galili
ENSTBEG00000016602	LSM7	100	82.857	ENSNBRG00000001237	-	56	82.857	Neolamprologus_brichardi
ENSTBEG00000016602	LSM7	100	82.857	ENSNBRG00000015770	lsm7	60	82.857	Neolamprologus_brichardi
ENSTBEG00000016602	LSM7	100	87.143	ENSNLEG00000002265	LSM7	68	87.143	Nomascus_leucogenys
ENSTBEG00000016602	LSM7	100	80.000	ENSODEG00000018769	-	68	80.000	Octodon_degus
ENSTBEG00000016602	LSM7	100	87.143	ENSODEG00000013590	-	68	87.143	Octodon_degus
ENSTBEG00000016602	LSM7	100	78.571	ENSODEG00000008190	-	74	78.571	Octodon_degus
ENSTBEG00000016602	LSM7	100	82.857	ENSONIG00000001801	lsm7	60	82.857	Oreochromis_niloticus
ENSTBEG00000016602	LSM7	100	82.857	ENSORLG00000023951	lsm7	68	82.857	Oryzias_latipes
ENSTBEG00000016602	LSM7	100	82.857	ENSORLG00020022226	lsm7	68	82.857	Oryzias_latipes_hni
ENSTBEG00000016602	LSM7	100	82.857	ENSORLG00015020044	lsm7	65	82.857	Oryzias_latipes_hsok
ENSTBEG00000016602	LSM7	100	82.857	ENSOMEG00000012806	lsm7	68	82.857	Oryzias_melastigma
ENSTBEG00000016602	LSM7	100	77.143	ENSOGAG00000024373	-	69	77.143	Otolemur_garnettii
ENSTBEG00000016602	LSM7	100	85.714	ENSOGAG00000000144	-	69	85.714	Otolemur_garnettii
ENSTBEG00000016602	LSM7	100	87.143	ENSOARG00000014013	LSM7	68	87.143	Ovis_aries
ENSTBEG00000016602	LSM7	100	87.143	ENSPPAG00000026500	LSM7	68	87.143	Pan_paniscus
ENSTBEG00000016602	LSM7	100	87.143	ENSPPRG00000008624	LSM7	68	87.143	Panthera_pardus
ENSTBEG00000016602	LSM7	100	87.143	ENSPTIG00000016252	LSM7	68	87.143	Panthera_tigris_altaica
ENSTBEG00000016602	LSM7	100	87.143	ENSPTRG00000010233	LSM7	68	87.143	Pan_troglodytes
ENSTBEG00000016602	LSM7	100	87.143	ENSPANG00000020668	LSM7	68	87.143	Papio_anubis
ENSTBEG00000016602	LSM7	100	84.286	ENSPKIG00000011325	lsm7	68	84.286	Paramormyrops_kingsleyae
ENSTBEG00000016602	LSM7	100	84.286	ENSPSIG00000017149	LSM7	61	84.286	Pelodiscus_sinensis
ENSTBEG00000016602	LSM7	100	82.857	ENSPMGG00000006498	lsm7	68	82.857	Periophthalmus_magnuspinnatus
ENSTBEG00000016602	LSM7	100	85.714	ENSPCIG00000030454	LSM7	69	85.714	Phascolarctos_cinereus
ENSTBEG00000016602	LSM7	100	81.429	ENSPFOG00000012467	lsm7	62	81.429	Poecilia_formosa
ENSTBEG00000016602	LSM7	100	81.429	ENSPLAG00000000252	lsm7	65	81.429	Poecilia_latipinna
ENSTBEG00000016602	LSM7	100	81.429	ENSPMEG00000000587	lsm7	65	81.429	Poecilia_mexicana
ENSTBEG00000016602	LSM7	100	87.143	ENSPCOG00000017177	LSM7	69	87.143	Propithecus_coquereli
ENSTBEG00000016602	LSM7	100	82.857	ENSPNYG00000006938	lsm7	68	82.857	Pundamilia_nyererei
ENSTBEG00000016602	LSM7	100	82.857	ENSPNAG00000010141	lsm7	69	82.857	Pygocentrus_nattereri
ENSTBEG00000016602	LSM7	99	86.957	ENSRNOG00000019552	Lsm7	67	86.957	Rattus_norvegicus
ENSTBEG00000016602	LSM7	100	87.143	ENSRBIG00000035978	LSM7	68	87.143	Rhinopithecus_bieti
ENSTBEG00000016602	LSM7	100	87.143	ENSRROG00000034044	LSM7	68	87.143	Rhinopithecus_roxellana
ENSTBEG00000016602	LSM7	84	41.935	YNL147W	-	54	41.935	Saccharomyces_cerevisiae
ENSTBEG00000016602	LSM7	100	87.143	ENSSBOG00000034899	LSM7	68	87.143	Saimiri_boliviensis_boliviensis
ENSTBEG00000016602	LSM7	100	81.429	ENSSFOG00015006728	lsm7	68	81.429	Scleropages_formosus
ENSTBEG00000016602	LSM7	100	82.857	ENSSMAG00000004195	lsm7	64	82.857	Scophthalmus_maximus
ENSTBEG00000016602	LSM7	100	82.857	ENSSDUG00000001863	lsm7	68	82.857	Seriola_dumerili
ENSTBEG00000016602	LSM7	100	82.857	ENSSLDG00000016339	lsm7	68	82.857	Seriola_lalandi_dorsalis
ENSTBEG00000016602	LSM7	100	82.857	ENSSPAG00000015221	lsm7	68	82.857	Stegastes_partitus
ENSTBEG00000016602	LSM7	100	87.143	ENSSSCG00000013463	LSM7	69	87.143	Sus_scrofa
ENSTBEG00000016602	LSM7	100	82.857	ENSTGUG00000000067	LSM7	69	82.857	Taeniopygia_guttata
ENSTBEG00000016602	LSM7	100	82.857	ENSTRUG00000022913	lsm7	68	82.857	Takifugu_rubripes
ENSTBEG00000016602	LSM7	100	82.857	ENSTNIG00000015525	lsm7	68	82.857	Tetraodon_nigroviridis
ENSTBEG00000016602	LSM7	100	87.143	ENSUAMG00000000912	LSM7	58	87.143	Ursus_americanus
ENSTBEG00000016602	LSM7	100	87.143	ENSUMAG00000006556	LSM7	55	87.143	Ursus_maritimus
ENSTBEG00000016602	LSM7	100	87.143	ENSVVUG00000002640	LSM7	64	87.143	Vulpes_vulpes
ENSTBEG00000016602	LSM7	100	82.857	ENSXETG00000022166	lsm7	69	82.857	Xenopus_tropicalis
ENSTBEG00000016602	LSM7	100	82.857	ENSXCOG00000002572	lsm7	69	82.857	Xiphophorus_couchianus
ENSTBEG00000016602	LSM7	100	82.857	ENSXMAG00000018630	lsm7	68	82.857	Xiphophorus_maculatus