EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000016722 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 483246 bases
Position: chrGeneScaffold_5044:10976-494221
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000014537	CMS1	PF14617.6	7.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000016714	CMSS1-201	843	-	ENSTBEP00000014537	280 (aa)	-	UPI0000F60446

Gene Model

Click here to download ENSTBEG00000016722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000016722's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000016722	CMSS1	100	59.286	ENSG00000184220	CMSS1	97	66.055	Homo_sapiens
ENSTBEG00000016722	CMSS1	72	45.050	ENSAPOG00000010604	cmss1	82	45.050	Acanthochromis_polyacanthus
ENSTBEG00000016722	CMSS1	81	69.869	ENSAMEG00000004092	CMSS1	88	69.869	Ailuropoda_melanoleuca
ENSTBEG00000016722	CMSS1	52	60.976	ENSACIG00000021854	cmss1	59	60.976	Amphilophus_citrinellus
ENSTBEG00000016722	CMSS1	72	45.050	ENSAOCG00000013361	cmss1	100	38.408	Amphiprion_ocellaris
ENSTBEG00000016722	CMSS1	72	45.050	ENSAPEG00000005829	cmss1	100	37.374	Amphiprion_percula
ENSTBEG00000016722	CMSS1	80	44.737	ENSATEG00000008209	cmss1	100	38.408	Anabas_testudineus
ENSTBEG00000016722	CMSS1	81	47.598	ENSAPLG00000010542	CMSS1	99	47.598	Anas_platyrhynchos
ENSTBEG00000016722	CMSS1	81	46.121	ENSACAG00000011065	CMSS1	85	46.983	Anolis_carolinensis
ENSTBEG00000016722	CMSS1	100	60.000	ENSANAG00000023565	CMSS1	100	60.000	Aotus_nancymaae
ENSTBEG00000016722	CMSS1	72	43.069	ENSACLG00000027294	cmss1	69	43.069	Astatotilapia_calliptera
ENSTBEG00000016722	CMSS1	71	37.500	ENSAMXG00000002046	cmss1	69	38.119	Astyanax_mexicanus
ENSTBEG00000016722	CMSS1	100	61.071	ENSBTAG00000013663	CMSS1	100	61.071	Bos_taurus
ENSTBEG00000016722	CMSS1	100	59.286	ENSCJAG00000000610	CMSS1	100	59.286	Callithrix_jacchus
ENSTBEG00000016722	CMSS1	81	69.737	ENSCAFG00000009230	CMSS1	83	69.737	Canis_familiaris
ENSTBEG00000016722	CMSS1	81	69.737	ENSCAFG00020009464	-	83	69.737	Canis_lupus_dingo
ENSTBEG00000016722	CMSS1	73	68.293	ENSCAFG00020024156	-	64	68.293	Canis_lupus_dingo
ENSTBEG00000016722	CMSS1	81	67.544	ENSCHIG00000013003	CMSS1	83	67.544	Capra_hircus
ENSTBEG00000016722	CMSS1	81	68.860	ENSTSYG00000009266	CMSS1	88	68.860	Carlito_syrichta
ENSTBEG00000016722	CMSS1	80	49.782	ENSCAPG00000013584	CMSS1	100	49.782	Cavia_aperea
ENSTBEG00000016722	CMSS1	100	60.000	ENSCPOG00000014680	CMSS1	100	60.000	Cavia_porcellus
ENSTBEG00000016722	CMSS1	100	60.714	ENSCCAG00000034685	CMSS1	100	60.714	Cebus_capucinus
ENSTBEG00000016722	CMSS1	100	60.357	ENSCATG00000031980	CMSS1	100	60.357	Cercocebus_atys
ENSTBEG00000016722	CMSS1	81	69.737	ENSCLAG00000011241	CMSS1	98	69.737	Chinchilla_lanigera
ENSTBEG00000016722	CMSS1	81	68.421	ENSCSAG00000006024	CMSS1	93	68.421	Chlorocebus_sabaeus
ENSTBEG00000016722	CMSS1	100	56.786	ENSCHOG00000012098	CMSS1	100	56.786	Choloepus_hoffmanni
ENSTBEG00000016722	CMSS1	100	60.000	ENSCANG00000031337	CMSS1	100	60.000	Colobus_angolensis_palliatus
ENSTBEG00000016722	CMSS1	100	54.643	ENSCGRG00001014305	Cmss1	100	54.643	Cricetulus_griseus_chok1gshd
ENSTBEG00000016722	CMSS1	81	61.404	ENSCGRG00000006722	Cmss1	89	61.404	Cricetulus_griseus_crigri
ENSTBEG00000016722	CMSS1	72	42.574	ENSCSEG00000004958	cmss1	69	42.574	Cynoglossus_semilaevis
ENSTBEG00000016722	CMSS1	100	38.194	ENSCVAG00000005039	cmss1	100	38.194	Cyprinodon_variegatus
ENSTBEG00000016722	CMSS1	81	37.229	ENSDARG00000112579	cmss1	100	31.879	Danio_rerio
ENSTBEG00000016722	CMSS1	81	66.667	ENSDNOG00000040418	CMSS1	83	66.667	Dasypus_novemcinctus
ENSTBEG00000016722	CMSS1	100	61.071	ENSDORG00000010461	Cmss1	100	61.071	Dipodomys_ordii
ENSTBEG00000016722	CMSS1	81	68.860	ENSEASG00005010966	CMSS1	99	68.493	Equus_asinus_asinus
ENSTBEG00000016722	CMSS1	81	68.421	ENSECAG00000015662	CMSS1	99	68.142	Equus_caballus
ENSTBEG00000016722	CMSS1	73	84.884	ENSEEUG00000007624	-	73	84.884	Erinaceus_europaeus
ENSTBEG00000016722	CMSS1	72	43.069	ENSELUG00000019459	cmss1	75	42.920	Esox_lucius
ENSTBEG00000016722	CMSS1	100	63.214	ENSFCAG00000044577	CMSS1	100	63.214	Felis_catus
ENSTBEG00000016722	CMSS1	81	46.491	ENSFALG00000005816	CMSS1	96	46.491	Ficedula_albicollis
ENSTBEG00000016722	CMSS1	81	67.982	ENSFDAG00000012577	CMSS1	100	67.982	Fukomys_damarensis
ENSTBEG00000016722	CMSS1	81	45.652	ENSFHEG00000012008	cmss1	95	45.652	Fundulus_heteroclitus
ENSTBEG00000016722	CMSS1	72	43.564	ENSGMOG00000016729	cmss1	72	43.564	Gadus_morhua
ENSTBEG00000016722	CMSS1	81	48.246	ENSGALG00000015267	CMSS1	87	48.246	Gallus_gallus
ENSTBEG00000016722	CMSS1	74	45.894	ENSGAFG00000021217	cmss1	77	45.050	Gambusia_affinis
ENSTBEG00000016722	CMSS1	72	41.089	ENSGACG00000002798	cmss1	72	41.089	Gasterosteus_aculeatus
ENSTBEG00000016722	CMSS1	81	48.684	ENSGAGG00000019861	CMSS1	89	48.684	Gopherus_agassizii
ENSTBEG00000016722	CMSS1	81	67.982	ENSGGOG00000014125	CMSS1	87	67.982	Gorilla_gorilla
ENSTBEG00000016722	CMSS1	72	43.069	ENSHBUG00000008431	cmss1	71	43.069	Haplochromis_burtoni
ENSTBEG00000016722	CMSS1	81	69.469	ENSHGLG00000019481	CMSS1	92	69.469	Heterocephalus_glaber_female
ENSTBEG00000016722	CMSS1	81	69.469	ENSHGLG00100010314	CMSS1	91	69.469	Heterocephalus_glaber_male
ENSTBEG00000016722	CMSS1	78	46.575	ENSHCOG00000003222	cmss1	74	46.575	Hippocampus_comes
ENSTBEG00000016722	CMSS1	79	38.914	ENSIPUG00000011591	cmss1	76	38.914	Ictalurus_punctatus
ENSTBEG00000016722	CMSS1	100	60.714	ENSSTOG00000019366	CMSS1	100	60.714	Ictidomys_tridecemlineatus
ENSTBEG00000016722	CMSS1	100	57.857	ENSJJAG00000014894	Cmss1	100	57.857	Jaculus_jaculus
ENSTBEG00000016722	CMSS1	50	64.706	ENSKMAG00000002390	cmss1	60	64.706	Kryptolebias_marmoratus
ENSTBEG00000016722	CMSS1	52	65.000	ENSLBEG00000006298	cmss1	60	65.000	Labrus_bergylta
ENSTBEG00000016722	CMSS1	81	44.783	ENSLACG00000009293	CMSS1	100	44.783	Latimeria_chalumnae
ENSTBEG00000016722	CMSS1	100	35.211	ENSLOCG00000009391	cmss1	100	35.211	Lepisosteus_oculatus
ENSTBEG00000016722	CMSS1	81	67.982	ENSLAFG00000017509	CMSS1	100	67.982	Loxodonta_africana
ENSTBEG00000016722	CMSS1	100	60.357	ENSMFAG00000045006	CMSS1	100	60.357	Macaca_fascicularis
ENSTBEG00000016722	CMSS1	100	60.357	ENSMMUG00000002939	CMSS1	97	67.431	Macaca_mulatta
ENSTBEG00000016722	CMSS1	100	60.000	ENSMNEG00000031315	CMSS1	100	60.000	Macaca_nemestrina
ENSTBEG00000016722	CMSS1	100	60.000	ENSMLEG00000033660	CMSS1	100	60.000	Mandrillus_leucophaeus
ENSTBEG00000016722	CMSS1	100	37.241	ENSMAMG00000017176	cmss1	100	37.586	Mastacembelus_armatus
ENSTBEG00000016722	CMSS1	72	43.069	ENSMZEG00005021886	cmss1	69	43.069	Maylandia_zebra
ENSTBEG00000016722	CMSS1	81	47.807	ENSMGAG00000014360	CMSS1	100	47.807	Meleagris_gallopavo
ENSTBEG00000016722	CMSS1	80	85.849	ENSMAUG00000020609	Cmss1	100	85.849	Mesocricetus_auratus
ENSTBEG00000016722	CMSS1	100	61.071	ENSMICG00000048977	CMSS1	100	61.071	Microcebus_murinus
ENSTBEG00000016722	CMSS1	100	55.357	ENSMOCG00000021937	Cmss1	100	55.357	Microtus_ochrogaster
ENSTBEG00000016722	CMSS1	72	43.069	ENSMMOG00000019794	cmss1	84	43.069	Mola_mola
ENSTBEG00000016722	CMSS1	81	56.140	ENSMODG00000002275	CMSS1	86	56.140	Monodelphis_domestica
ENSTBEG00000016722	CMSS1	100	35.739	ENSMALG00000004250	cmss1	100	35.739	Monopterus_albus
ENSTBEG00000016722	CMSS1	100	55.516	MGP_CAROLIEiJ_G0020824	Cmss1	100	55.516	Mus_caroli
ENSTBEG00000016722	CMSS1	100	56.228	ENSMUSG00000022748	Cmss1	100	56.228	Mus_musculus
ENSTBEG00000016722	CMSS1	100	55.872	MGP_PahariEiJ_G0016524	Cmss1	100	55.872	Mus_pahari
ENSTBEG00000016722	CMSS1	100	55.872	MGP_SPRETEiJ_G0021724	Cmss1	100	55.872	Mus_spretus
ENSTBEG00000016722	CMSS1	81	71.806	ENSMPUG00000011324	CMSS1	88	71.806	Mustela_putorius_furo
ENSTBEG00000016722	CMSS1	62	93.396	ENSMLUG00000001131	CMSS1	66	93.396	Myotis_lucifugus
ENSTBEG00000016722	CMSS1	100	58.571	ENSNGAG00000020316	Cmss1	100	58.571	Nannospalax_galili
ENSTBEG00000016722	CMSS1	72	42.574	ENSNBRG00000003095	cmss1	69	42.574	Neolamprologus_brichardi
ENSTBEG00000016722	CMSS1	100	61.071	ENSNLEG00000034172	CMSS1	100	61.071	Nomascus_leucogenys
ENSTBEG00000016722	CMSS1	81	44.298	ENSMEUG00000014505	CMSS1	100	44.298	Notamacropus_eugenii
ENSTBEG00000016722	CMSS1	100	60.357	ENSOPRG00000002986	CMSS1	100	60.357	Ochotona_princeps
ENSTBEG00000016722	CMSS1	80	83.962	ENSODEG00000001853	-	83	83.962	Octodon_degus
ENSTBEG00000016722	CMSS1	100	58.214	ENSODEG00000003558	-	100	58.214	Octodon_degus
ENSTBEG00000016722	CMSS1	100	59.643	ENSODEG00000005226	-	100	59.643	Octodon_degus
ENSTBEG00000016722	CMSS1	80	79.245	ENSODEG00000009446	-	79	79.245	Octodon_degus
ENSTBEG00000016722	CMSS1	72	43.069	ENSONIG00000006678	cmss1	77	43.069	Oreochromis_niloticus
ENSTBEG00000016722	CMSS1	81	53.509	ENSOANG00000007529	CMSS1	99	53.017	Ornithorhynchus_anatinus
ENSTBEG00000016722	CMSS1	81	67.982	ENSOCUG00000025366	CMSS1	83	67.982	Oryctolagus_cuniculus
ENSTBEG00000016722	CMSS1	72	45.050	ENSORLG00000020340	cmss1	100	40.000	Oryzias_latipes
ENSTBEG00000016722	CMSS1	55	57.955	ENSORLG00020012235	cmss1	57	67.500	Oryzias_latipes_hni
ENSTBEG00000016722	CMSS1	100	36.678	ENSOMEG00000012555	cmss1	100	39.446	Oryzias_melastigma
ENSTBEG00000016722	CMSS1	81	67.982	ENSOGAG00000002045	CMSS1	100	67.982	Otolemur_garnettii
ENSTBEG00000016722	CMSS1	62	91.509	ENSOARG00000017899	CMSS1	59	91.509	Ovis_aries
ENSTBEG00000016722	CMSS1	81	67.982	ENSPPAG00000038515	CMSS1	84	67.982	Pan_paniscus
ENSTBEG00000016722	CMSS1	100	63.214	ENSPPRG00000016767	CMSS1	100	63.214	Panthera_pardus
ENSTBEG00000016722	CMSS1	100	62.857	ENSPTIG00000018274	CMSS1	100	62.857	Panthera_tigris_altaica
ENSTBEG00000016722	CMSS1	100	59.643	ENSPTRG00000015157	CMSS1	93	67.544	Pan_troglodytes
ENSTBEG00000016722	CMSS1	81	68.421	ENSPANG00000019980	CMSS1	91	68.421	Papio_anubis
ENSTBEG00000016722	CMSS1	91	37.692	ENSPKIG00000012609	cmss1	97	37.838	Paramormyrops_kingsleyae
ENSTBEG00000016722	CMSS1	81	49.561	ENSPSIG00000003849	CMSS1	99	49.561	Pelodiscus_sinensis
ENSTBEG00000016722	CMSS1	72	42.857	ENSPMGG00000010286	cmss1	87	42.857	Periophthalmus_magnuspinnatus
ENSTBEG00000016722	CMSS1	100	56.786	ENSPEMG00000016384	Cmss1	100	56.786	Peromyscus_maniculatus_bairdii
ENSTBEG00000016722	CMSS1	73	37.745	ENSPMAG00000001146	cmss1	99	38.119	Petromyzon_marinus
ENSTBEG00000016722	CMSS1	81	56.579	ENSPCIG00000015656	CMSS1	86	56.579	Phascolarctos_cinereus
ENSTBEG00000016722	CMSS1	100	36.364	ENSPFOG00000016849	cmss1	100	38.112	Poecilia_formosa
ENSTBEG00000016722	CMSS1	100	36.014	ENSPLAG00000008323	cmss1	100	37.762	Poecilia_latipinna
ENSTBEG00000016722	CMSS1	72	44.059	ENSPMEG00000021020	cmss1	100	38.194	Poecilia_mexicana
ENSTBEG00000016722	CMSS1	72	43.564	ENSPREG00000007618	cmss1	69	43.564	Poecilia_reticulata
ENSTBEG00000016722	CMSS1	100	59.643	ENSPPYG00000013606	CMSS1	100	59.643	Pongo_abelii
ENSTBEG00000016722	CMSS1	100	61.786	ENSPCOG00000020035	CMSS1	100	61.786	Propithecus_coquereli
ENSTBEG00000016722	CMSS1	100	51.071	ENSPVAG00000017031	CMSS1	100	51.071	Pteropus_vampyrus
ENSTBEG00000016722	CMSS1	63	42.614	ENSPNYG00000013428	cmss1	65	42.614	Pundamilia_nyererei
ENSTBEG00000016722	CMSS1	100	34.694	ENSPNAG00000007912	cmss1	100	34.354	Pygocentrus_nattereri
ENSTBEG00000016722	CMSS1	81	62.445	ENSRNOG00000027888	Cmss1	89	62.445	Rattus_norvegicus
ENSTBEG00000016722	CMSS1	100	60.357	ENSRBIG00000037931	CMSS1	100	60.357	Rhinopithecus_bieti
ENSTBEG00000016722	CMSS1	100	60.357	ENSRROG00000042910	CMSS1	72	93.396	Rhinopithecus_roxellana
ENSTBEG00000016722	CMSS1	81	67.982	ENSSBOG00000030980	CMSS1	87	67.982	Saimiri_boliviensis_boliviensis
ENSTBEG00000016722	CMSS1	81	57.018	ENSSHAG00000009321	CMSS1	90	57.018	Sarcophilus_harrisii
ENSTBEG00000016722	CMSS1	100	37.241	ENSSFOG00015001509	cmss1	100	37.241	Scleropages_formosus
ENSTBEG00000016722	CMSS1	100	38.014	ENSSMAG00000001653	cmss1	100	37.113	Scophthalmus_maximus
ENSTBEG00000016722	CMSS1	100	38.194	ENSSDUG00000007719	cmss1	100	38.542	Seriola_dumerili
ENSTBEG00000016722	CMSS1	74	44.928	ENSSLDG00000012300	cmss1	68	44.554	Seriola_lalandi_dorsalis
ENSTBEG00000016722	CMSS1	80	59.434	ENSSARG00000003584	CMSS1	81	59.434	Sorex_araneus
ENSTBEG00000016722	CMSS1	81	47.345	ENSSPUG00000003865	CMSS1	100	47.345	Sphenodon_punctatus
ENSTBEG00000016722	CMSS1	74	46.117	ENSSPAG00000019182	cmss1	63	45.545	Stegastes_partitus
ENSTBEG00000016722	CMSS1	100	62.143	ENSSSCG00000011970	CMSS1	100	62.143	Sus_scrofa
ENSTBEG00000016722	CMSS1	81	46.053	ENSTGUG00000013635	CMSS1	99	46.053	Taeniopygia_guttata
ENSTBEG00000016722	CMSS1	72	42.574	ENSTRUG00000015265	cmss1	100	35.689	Takifugu_rubripes
ENSTBEG00000016722	CMSS1	72	36.634	ENSTNIG00000002880	cmss1	73	36.634	Tetraodon_nigroviridis
ENSTBEG00000016722	CMSS1	100	58.929	ENSTTRG00000001562	CMSS1	100	58.929	Tursiops_truncatus
ENSTBEG00000016722	CMSS1	81	70.614	ENSUAMG00000024209	CMSS1	100	70.404	Ursus_americanus
ENSTBEG00000016722	CMSS1	81	70.175	ENSUMAG00000001983	CMSS1	88	70.175	Ursus_maritimus
ENSTBEG00000016722	CMSS1	81	69.298	ENSVVUG00000021647	-	93	69.298	Vulpes_vulpes
ENSTBEG00000016722	CMSS1	78	68.664	ENSVVUG00000007776	-	85	68.664	Vulpes_vulpes
ENSTBEG00000016722	CMSS1	100	37.589	ENSXETG00000011858	cmss1	100	37.589	Xenopus_tropicalis
ENSTBEG00000016722	CMSS1	74	45.192	ENSXCOG00000018724	cmss1	69	44.554	Xiphophorus_couchianus
ENSTBEG00000016722	CMSS1	74	45.192	ENSXMAG00000011243	cmss1	76	44.554	Xiphophorus_maculatus