EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000017186 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 17476 bases
Position: chrGeneScaffold_4247:2776-20251
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000014932	Smg4_UPF3	PF03467.15	1.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000017178	-	948	-	ENSTBEP00000014932	316 (aa)	-	UPI0000F5DBB7

Gene Model

Click here to download ENSTBEG00000017186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000017186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000017186	-	60	42.857	ENSG00000125351	UPF3B	66	40.367	Homo_sapiens
ENSTBEG00000017186	-	100	61.702	ENSG00000169062	UPF3A	69	61.702	Homo_sapiens
ENSTBEG00000017186	-	99	64.329	ENSAMEG00000004259	UPF3A	72	64.329	Ailuropoda_melanoleuca
ENSTBEG00000017186	-	78	37.931	ENSAMEG00000000163	UPF3B	66	42.006	Ailuropoda_melanoleuca
ENSTBEG00000017186	-	95	59.468	ENSACAG00000001540	UPF3A	72	59.468	Anolis_carolinensis
ENSTBEG00000017186	-	60	42.564	ENSANAG00000025598	-	65	36.646	Aotus_nancymaae
ENSTBEG00000017186	-	100	59.271	ENSANAG00000021713	UPF3A	69	59.271	Aotus_nancymaae
ENSTBEG00000017186	-	60	42.857	ENSANAG00000021894	-	66	40.752	Aotus_nancymaae
ENSTBEG00000017186	-	100	60.182	ENSCJAG00000019102	UPF3A	69	60.790	Callithrix_jacchus
ENSTBEG00000017186	-	60	42.347	ENSCJAG00000004975	UPF3B	66	40.439	Callithrix_jacchus
ENSTBEG00000017186	-	98	63.259	ENSCAFG00000006504	UPF3A	67	63.259	Canis_familiaris
ENSTBEG00000017186	-	60	42.857	ENSCAFG00000018426	UPF3B	68	41.693	Canis_familiaris
ENSTBEG00000017186	-	98	63.259	ENSCAFG00020014268	UPF3A	65	63.259	Canis_lupus_dingo
ENSTBEG00000017186	-	100	57.143	ENSCHIG00000008682	UPF3A	65	57.143	Capra_hircus
ENSTBEG00000017186	-	98	58.589	ENSTSYG00000001918	UPF3A	86	58.282	Carlito_syrichta
ENSTBEG00000017186	-	60	42.857	ENSTSYG00000014690	UPF3B	50	47.748	Carlito_syrichta
ENSTBEG00000017186	-	93	59.459	ENSCPOG00000006824	UPF3A	68	59.459	Cavia_porcellus
ENSTBEG00000017186	-	100	59.878	ENSCCAG00000018406	UPF3A	69	60.486	Cebus_capucinus
ENSTBEG00000017186	-	100	54.407	ENSCATG00000029733	UPF3A	68	61.702	Cercocebus_atys
ENSTBEG00000017186	-	60	42.857	ENSCATG00000017506	UPF3B	66	40.752	Cercocebus_atys
ENSTBEG00000017186	-	60	42.857	ENSCLAG00000003260	UPF3B	65	41.401	Chinchilla_lanigera
ENSTBEG00000017186	-	100	53.313	ENSCSAG00000017388	UPF3A	68	60.843	Chlorocebus_sabaeus
ENSTBEG00000017186	-	95	62.876	ENSCGRG00001017387	Upf3a	68	62.876	Cricetulus_griseus_chok1gshd
ENSTBEG00000017186	-	60	42.289	ENSCGRG00001006858	-	67	41.049	Cricetulus_griseus_chok1gshd
ENSTBEG00000017186	-	60	42.500	ENSCGRG00001013643	-	53	42.564	Cricetulus_griseus_chok1gshd
ENSTBEG00000017186	-	95	62.876	ENSCGRG00000001468	Upf3a	68	62.876	Cricetulus_griseus_crigri
ENSTBEG00000017186	-	60	44.388	ENSCGRG00000007627	Upf3b	75	40.741	Cricetulus_griseus_crigri
ENSTBEG00000017186	-	93	50.498	ENSCSEG00000005106	upf3a	62	52.980	Cynoglossus_semilaevis
ENSTBEG00000017186	-	95	66.113	ENSDNOG00000034391	UPF3A	68	66.113	Dasypus_novemcinctus
ENSTBEG00000017186	-	83	57.736	ENSETEG00000010110	UPF3A	55	61.132	Echinops_telfairi
ENSTBEG00000017186	-	100	61.515	ENSEASG00005021884	UPF3A	68	61.515	Equus_asinus_asinus
ENSTBEG00000017186	-	60	46.154	ENSEASG00005012919	UPF3B	66	36.129	Equus_asinus_asinus
ENSTBEG00000017186	-	60	46.154	ENSECAG00000016947	UPF3B	66	36.129	Equus_caballus
ENSTBEG00000017186	-	100	61.515	ENSECAG00000017141	UPF3A	68	61.515	Equus_caballus
ENSTBEG00000017186	-	60	42.857	ENSFCAG00000004388	UPF3B	65	41.270	Felis_catus
ENSTBEG00000017186	-	99	64.013	ENSFCAG00000014602	UPF3A	65	64.217	Felis_catus
ENSTBEG00000017186	-	93	52.824	ENSGMOG00000019615	upf3a	89	52.145	Gadus_morhua
ENSTBEG00000017186	-	93	44.951	ENSGACG00000001972	upf3a	88	47.020	Gasterosteus_aculeatus
ENSTBEG00000017186	-	61	44.000	ENSGACG00000017435	upf3b	66	39.571	Gasterosteus_aculeatus
ENSTBEG00000017186	-	100	61.702	ENSGGOG00000015428	UPF3A	69	61.702	Gorilla_gorilla
ENSTBEG00000017186	-	60	42.857	ENSGGOG00000023995	UPF3B	66	40.367	Gorilla_gorilla
ENSTBEG00000017186	-	100	48.476	ENSGGOG00000041219	-	72	47.866	Gorilla_gorilla
ENSTBEG00000017186	-	100	48.476	ENSGGOG00000043074	-	67	47.866	Gorilla_gorilla
ENSTBEG00000017186	-	59	43.523	ENSHBUG00000017393	upf3b	74	41.329	Haplochromis_burtoni
ENSTBEG00000017186	-	92	60.274	ENSHGLG00000001544	UPF3A	67	60.274	Heterocephalus_glaber_female
ENSTBEG00000017186	-	60	44.724	ENSHGLG00000011189	-	72	41.290	Heterocephalus_glaber_female
ENSTBEG00000017186	-	60	42.857	ENSHGLG00000019582	-	66	41.270	Heterocephalus_glaber_female
ENSTBEG00000017186	-	60	42.857	ENSHGLG00100002042	-	65	40.909	Heterocephalus_glaber_male
ENSTBEG00000017186	-	60	44.724	ENSHGLG00100001889	-	72	41.424	Heterocephalus_glaber_male
ENSTBEG00000017186	-	92	60.274	ENSHGLG00100013244	UPF3A	67	60.274	Heterocephalus_glaber_male
ENSTBEG00000017186	-	60	54.040	ENSHCOG00000017004	upf3b	62	44.330	Hippocampus_comes
ENSTBEG00000017186	-	60	42.857	ENSSTOG00000001101	UPF3B	66	41.905	Ictidomys_tridecemlineatus
ENSTBEG00000017186	-	60	43.367	ENSJJAG00000000053	Upf3b	66	36.909	Jaculus_jaculus
ENSTBEG00000017186	-	60	39.423	ENSLACG00000006645	UPF3A	63	37.500	Latimeria_chalumnae
ENSTBEG00000017186	-	59	53.807	ENSLOCG00000015238	upf3b	74	36.826	Lepisosteus_oculatus
ENSTBEG00000017186	-	95	55.116	ENSLOCG00000002665	upf3a	65	54.967	Lepisosteus_oculatus
ENSTBEG00000017186	-	94	50.784	ENSLAFG00000023358	UPF3A	75	50.318	Loxodonta_africana
ENSTBEG00000017186	-	60	42.857	ENSLAFG00000001267	UPF3B	66	41.270	Loxodonta_africana
ENSTBEG00000017186	-	100	53.495	ENSMFAG00000045016	UPF3A	68	60.790	Macaca_fascicularis
ENSTBEG00000017186	-	60	42.857	ENSMFAG00000045414	UPF3B	66	40.752	Macaca_fascicularis
ENSTBEG00000017186	-	100	54.711	ENSMMUG00000007449	UPF3A	71	62.006	Macaca_mulatta
ENSTBEG00000017186	-	60	42.857	ENSMMUG00000020222	UPF3B	66	40.752	Macaca_mulatta
ENSTBEG00000017186	-	60	42.857	ENSMNEG00000039794	UPF3B	66	40.752	Macaca_nemestrina
ENSTBEG00000017186	-	100	54.711	ENSMNEG00000036402	UPF3A	67	62.006	Macaca_nemestrina
ENSTBEG00000017186	-	60	42.857	ENSMLEG00000010999	UPF3B	66	40.752	Mandrillus_leucophaeus
ENSTBEG00000017186	-	100	54.103	ENSMLEG00000014726	UPF3A	75	61.398	Mandrillus_leucophaeus
ENSTBEG00000017186	-	95	61.794	ENSMGAG00000014837	UPF3A	75	61.794	Meleagris_gallopavo
ENSTBEG00000017186	-	60	43.878	ENSMAUG00000008705	Upf3b	67	41.033	Mesocricetus_auratus
ENSTBEG00000017186	-	64	68.966	ENSMOCG00000000550	Upf3a	58	68.116	Microtus_ochrogaster
ENSTBEG00000017186	-	95	64.452	ENSMODG00000003159	UPF3A	70	64.452	Monodelphis_domestica
ENSTBEG00000017186	-	95	61.873	MGP_CAROLIEiJ_G0030848	Upf3a	67	61.873	Mus_caroli
ENSTBEG00000017186	-	95	61.873	ENSMUSG00000038398	Upf3a	68	61.873	Mus_musculus
ENSTBEG00000017186	-	95	62.542	MGP_PahariEiJ_G0021311	Upf3a	68	62.542	Mus_pahari
ENSTBEG00000017186	-	95	62.000	MGP_SPRETEiJ_G0031958	Upf3a	68	62.000	Mus_spretus
ENSTBEG00000017186	-	100	62.424	ENSMPUG00000009139	UPF3A	68	62.424	Mustela_putorius_furo
ENSTBEG00000017186	-	78	37.931	ENSMPUG00000001531	UPF3B	68	42.006	Mustela_putorius_furo
ENSTBEG00000017186	-	60	43.350	ENSMLUG00000010821	UPF3B	66	41.693	Myotis_lucifugus
ENSTBEG00000017186	-	100	60.180	ENSMLUG00000015905	UPF3A	79	60.180	Myotis_lucifugus
ENSTBEG00000017186	-	94	62.963	ENSNGAG00000019314	Upf3a	68	62.963	Nannospalax_galili
ENSTBEG00000017186	-	100	61.702	ENSNLEG00000007563	UPF3A	69	61.702	Nomascus_leucogenys
ENSTBEG00000017186	-	60	42.857	ENSNLEG00000014897	UPF3B	66	40.367	Nomascus_leucogenys
ENSTBEG00000017186	-	79	46.032	ENSOPRG00000008846	-	58	55.556	Ochotona_princeps
ENSTBEG00000017186	-	93	53.378	ENSOANG00000006985	-	75	53.378	Ornithorhynchus_anatinus
ENSTBEG00000017186	-	95	54.276	ENSOCUG00000008450	UPF3A	60	54.276	Oryctolagus_cuniculus
ENSTBEG00000017186	-	97	52.581	ENSORLG00000010911	upf3a	61	53.535	Oryzias_latipes
ENSTBEG00000017186	-	64	38.785	ENSORLG00000001026	upf3b	77	39.264	Oryzias_latipes
ENSTBEG00000017186	-	64	39.252	ENSORLG00020003758	upf3b	70	39.571	Oryzias_latipes_hni
ENSTBEG00000017186	-	97	50.645	ENSORLG00020014317	upf3a	61	51.515	Oryzias_latipes_hni
ENSTBEG00000017186	-	64	39.252	ENSORLG00015012954	upf3b	66	41.368	Oryzias_latipes_hsok
ENSTBEG00000017186	-	91	62.887	ENSOGAG00000004788	UPF3A	70	62.671	Otolemur_garnettii
ENSTBEG00000017186	-	60	44.162	ENSOGAG00000033003	-	68	37.771	Otolemur_garnettii
ENSTBEG00000017186	-	60	43.878	ENSOGAG00000004643	-	66	37.778	Otolemur_garnettii
ENSTBEG00000017186	-	100	59.394	ENSOARG00000009004	UPF3A	70	59.394	Ovis_aries
ENSTBEG00000017186	-	62	38.889	ENSOARG00000007869	-	71	30.464	Ovis_aries
ENSTBEG00000017186	-	100	61.398	ENSPPAG00000042267	UPF3A	69	61.398	Pan_paniscus
ENSTBEG00000017186	-	60	42.857	ENSPPAG00000040390	UPF3B	66	40.367	Pan_paniscus
ENSTBEG00000017186	-	99	64.013	ENSPPRG00000025062	UPF3A	63	65.894	Panthera_pardus
ENSTBEG00000017186	-	60	42.857	ENSPPRG00000023536	UPF3B	65	41.534	Panthera_pardus
ENSTBEG00000017186	-	60	42.857	ENSPTIG00000015264	UPF3B	59	42.034	Panthera_tigris_altaica
ENSTBEG00000017186	-	60	42.857	ENSPTRG00000022228	UPF3B	66	40.367	Pan_troglodytes
ENSTBEG00000017186	-	99	47.095	ENSPTRG00000041835	-	71	45.399	Pan_troglodytes
ENSTBEG00000017186	-	99	49.693	ENSPTRG00000051640	-	71	47.239	Pan_troglodytes
ENSTBEG00000017186	-	99	46.626	ENSPTRG00000041187	-	72	46.933	Pan_troglodytes
ENSTBEG00000017186	-	100	61.398	ENSPTRG00000006073	UPF3A	70	61.398	Pan_troglodytes
ENSTBEG00000017186	-	60	42.857	ENSPANG00000000900	UPF3B	66	40.752	Papio_anubis
ENSTBEG00000017186	-	100	54.711	ENSPANG00000004346	UPF3A	68	62.006	Papio_anubis
ENSTBEG00000017186	-	61	52.885	ENSPKIG00000019226	upf3b	71	42.169	Paramormyrops_kingsleyae
ENSTBEG00000017186	-	95	61.130	ENSPSIG00000007468	UPF3A	74	61.130	Pelodiscus_sinensis
ENSTBEG00000017186	-	60	43.284	ENSPEMG00000012352	Upf3b	69	41.176	Peromyscus_maniculatus_bairdii
ENSTBEG00000017186	-	94	63.973	ENSPEMG00000019968	-	68	63.973	Peromyscus_maniculatus_bairdii
ENSTBEG00000017186	-	100	61.398	ENSPPYG00000005536	UPF3A	69	61.398	Pongo_abelii
ENSTBEG00000017186	-	60	42.857	ENSPCOG00000021960	UPF3B	66	40.938	Propithecus_coquereli
ENSTBEG00000017186	-	99	60.510	ENSPVAG00000005656	UPF3A	63	62.667	Pteropus_vampyrus
ENSTBEG00000017186	-	54	54.971	ENSPNAG00000021528	upf3b	61	36.806	Pygocentrus_nattereri
ENSTBEG00000017186	-	93	60.884	ENSRNOG00000017397	Upf3a	70	60.884	Rattus_norvegicus
ENSTBEG00000017186	-	100	54.103	ENSRBIG00000034007	UPF3A	73	61.398	Rhinopithecus_bieti
ENSTBEG00000017186	-	100	53.799	ENSRROG00000012212	UPF3A	68	61.702	Rhinopithecus_roxellana
ENSTBEG00000017186	-	60	42.857	ENSRROG00000041031	UPF3B	66	40.367	Rhinopithecus_roxellana
ENSTBEG00000017186	-	100	59.271	ENSSBOG00000029989	UPF3A	75	59.878	Saimiri_boliviensis_boliviensis
ENSTBEG00000017186	-	60	42.857	ENSSBOG00000019740	UPF3B	69	39.820	Saimiri_boliviensis_boliviensis
ENSTBEG00000017186	-	95	64.784	ENSSHAG00000009895	UPF3A	72	64.784	Sarcophilus_harrisii
ENSTBEG00000017186	-	61	55.665	ENSSFOG00015005614	upf3b	65	44.444	Scleropages_formosus
ENSTBEG00000017186	-	94	49.832	ENSSFOG00015021851	upf3a	61	49.158	Scleropages_formosus
ENSTBEG00000017186	-	62	52.174	ENSSMAG00000012913	upf3b	74	39.368	Scophthalmus_maximus
ENSTBEG00000017186	-	87	56.318	ENSSARG00000007262	UPF3A	67	57.609	Sorex_araneus
ENSTBEG00000017186	-	59	54.822	ENSSPAG00000009989	upf3b	70	42.025	Stegastes_partitus
ENSTBEG00000017186	-	60	42.857	ENSSSCG00000012617	UPF3B	65	41.214	Sus_scrofa
ENSTBEG00000017186	-	100	54.407	ENSSSCG00000024679	UPF3A	66	61.094	Sus_scrofa
ENSTBEG00000017186	-	59	45.128	ENSTGUG00000003413	UPF3B	72	41.667	Taeniopygia_guttata
ENSTBEG00000017186	-	95	61.794	ENSTGUG00000009493	UPF3A	77	61.794	Taeniopygia_guttata
ENSTBEG00000017186	-	93	51.701	ENSTRUG00000012730	upf3a	62	51.701	Takifugu_rubripes
ENSTBEG00000017186	-	95	42.333	ENSTNIG00000014973	upf3a	73	43.390	Tetraodon_nigroviridis
ENSTBEG00000017186	-	99	61.783	ENSTTRG00000015414	UPF3A	66	61.783	Tursiops_truncatus
ENSTBEG00000017186	-	94	64.214	ENSVPAG00000003525	UPF3A	75	64.214	Vicugna_pacos
ENSTBEG00000017186	-	98	62.939	ENSVVUG00000013538	UPF3A	63	62.939	Vulpes_vulpes
ENSTBEG00000017186	-	95	44.186	ENSXETG00000002572	upf3a	69	44.300	Xenopus_tropicalis
ENSTBEG00000017186	-	69	43.805	ENSXETG00000007440	upf3b	52	55.462	Xenopus_tropicalis