EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000017730 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: DKFZp547I1315|DKFZp686E01200|DKFZp781D1727|FLJ38614
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 117134 bases
Position: chrGeneScaffold_4539:115877-233010
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000015430	ResIII	PF04851.15	9.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000017740	-	4716	-	ENSTBEP00000015430	1572 (aa)	-	UPI0000F5F508

Gene Model

Click here to download ENSTBEG00000017730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000017730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000017730	-	83	97.797	ENSG00000173575	CHD2	100	98.246	Homo_sapiens
ENSTBEG00000017730	-	78	70.925	ENSAPOG00000008913	chd2	73	70.925	Acanthochromis_polyacanthus
ENSTBEG00000017730	-	69	84.615	ENSAMEG00000010805	-	94	84.615	Ailuropoda_melanoleuca
ENSTBEG00000017730	-	76	70.109	ENSAOCG00000016332	chd2	73	67.337	Amphiprion_ocellaris
ENSTBEG00000017730	-	78	71.366	ENSAPEG00000016676	chd2	73	71.366	Amphiprion_percula
ENSTBEG00000017730	-	78	73.128	ENSATEG00000005246	chd2	73	73.128	Anabas_testudineus
ENSTBEG00000017730	-	81	89.427	ENSAPLG00000011141	-	68	89.427	Anas_platyrhynchos
ENSTBEG00000017730	-	83	82.500	ENSACAG00000000088	-	74	82.500	Anolis_carolinensis
ENSTBEG00000017730	-	83	96.916	ENSANAG00000024017	-	71	96.916	Aotus_nancymaae
ENSTBEG00000017730	-	76	70.652	ENSACLG00000021370	chd2	68	66.990	Astatotilapia_calliptera
ENSTBEG00000017730	-	54	78.960	ENSBTAG00000017776	CHD2	99	78.960	Bos_taurus
ENSTBEG00000017730	-	83	96.035	ENSCJAG00000020444	-	71	96.035	Callithrix_jacchus
ENSTBEG00000017730	-	83	97.357	ENSCAFG00000010998	CHD2	95	97.357	Canis_familiaris
ENSTBEG00000017730	-	83	93.392	ENSCHIG00000022261	-	77	93.392	Capra_hircus
ENSTBEG00000017730	-	83	98.238	ENSTSYG00000003272	-	82	98.238	Carlito_syrichta
ENSTBEG00000017730	-	75	91.489	ENSCPOG00000005800	-	69	91.489	Cavia_porcellus
ENSTBEG00000017730	-	83	96.916	ENSCCAG00000035304	-	71	96.916	Cebus_capucinus
ENSTBEG00000017730	-	83	96.916	ENSCATG00000031069	-	72	96.916	Cercocebus_atys
ENSTBEG00000017730	-	83	97.357	ENSCLAG00000016269	-	71	97.357	Chinchilla_lanigera
ENSTBEG00000017730	-	83	97.357	ENSCSAG00000017007	-	71	97.357	Chlorocebus_sabaeus
ENSTBEG00000017730	-	67	96.035	ENSCHOG00000000608	-	60	96.035	Choloepus_hoffmanni
ENSTBEG00000017730	-	66	84.409	ENSCPBG00000018049	-	95	75.088	Chrysemys_picta_bellii
ENSTBEG00000017730	-	58	56.493	ENSCSAVG00000007580	-	72	63.620	Ciona_savignyi
ENSTBEG00000017730	-	83	97.357	ENSCANG00000038126	-	71	97.357	Colobus_angolensis_palliatus
ENSTBEG00000017730	-	83	95.595	ENSCGRG00001006649	Chd2	71	95.595	Cricetulus_griseus_chok1gshd
ENSTBEG00000017730	-	83	95.595	ENSCGRG00000018154	Chd2	71	95.595	Cricetulus_griseus_crigri
ENSTBEG00000017730	-	68	69.196	ENSCSEG00000003646	chd2	56	68.889	Cynoglossus_semilaevis
ENSTBEG00000017730	-	79	71.806	ENSCVAG00000002427	chd2	72	91.057	Cyprinodon_variegatus
ENSTBEG00000017730	-	74	68.421	ENSDARG00000060687	chd2	77	69.604	Danio_rerio
ENSTBEG00000017730	-	89	96.930	ENSDNOG00000009796	-	77	96.930	Dasypus_novemcinctus
ENSTBEG00000017730	-	82	98.238	ENSEASG00005015526	-	77	98.238	Equus_asinus_asinus
ENSTBEG00000017730	-	73	72.247	ENSELUG00000017981	chd2	75	82.500	Esox_lucius
ENSTBEG00000017730	-	85	88.987	ENSFALG00000010369	-	71	88.987	Ficedula_albicollis
ENSTBEG00000017730	-	83	97.357	ENSFDAG00000020651	-	71	97.357	Fukomys_damarensis
ENSTBEG00000017730	-	65	70.485	ENSFHEG00000002119	chd2	50	70.485	Fundulus_heteroclitus
ENSTBEG00000017730	-	75	71.366	ENSGMOG00000002890	chd2	69	71.366	Gadus_morhua
ENSTBEG00000017730	-	83	88.546	ENSGALG00000006949	CHD2	71	88.546	Gallus_gallus
ENSTBEG00000017730	-	74	66.441	ENSGAFG00000001905	chd2	69	60.911	Gambusia_affinis
ENSTBEG00000017730	-	78	69.604	ENSGACG00000013246	chd2	76	69.604	Gasterosteus_aculeatus
ENSTBEG00000017730	-	65	91.892	ENSGAGG00000013176	-	97	74.641	Gopherus_agassizii
ENSTBEG00000017730	-	83	97.797	ENSGGOG00000015677	CHD2	73	97.797	Gorilla_gorilla
ENSTBEG00000017730	-	78	71.806	ENSHBUG00000017947	chd2	73	71.806	Haplochromis_burtoni
ENSTBEG00000017730	-	83	96.916	ENSHGLG00000004435	CHD2	71	96.916	Heterocephalus_glaber_female
ENSTBEG00000017730	-	78	100.000	ENSHGLG00100016376	-	67	100.000	Heterocephalus_glaber_male
ENSTBEG00000017730	-	72	85.714	ENSHCOG00000008855	chd2	67	65.132	Hippocampus_comes
ENSTBEG00000017730	-	74	70.053	ENSIPUG00000000488	chd2	71	70.053	Ictalurus_punctatus
ENSTBEG00000017730	-	83	98.678	ENSSTOG00000001270	-	71	98.678	Ictidomys_tridecemlineatus
ENSTBEG00000017730	-	90	97.797	ENSJJAG00000000213	Chd2	77	97.797	Jaculus_jaculus
ENSTBEG00000017730	-	60	71.927	ENSKMAG00000015849	chd2	67	71.366	Kryptolebias_marmoratus
ENSTBEG00000017730	-	83	97.797	ENSLAFG00000016885	-	95	97.797	Loxodonta_africana
ENSTBEG00000017730	-	83	97.357	ENSMFAG00000033343	-	71	97.357	Macaca_fascicularis
ENSTBEG00000017730	-	83	97.357	ENSMMUG00000011782	-	71	97.357	Macaca_mulatta
ENSTBEG00000017730	-	83	97.357	ENSMNEG00000036875	-	72	97.357	Macaca_nemestrina
ENSTBEG00000017730	-	83	97.357	ENSMLEG00000035026	-	72	97.357	Mandrillus_leucophaeus
ENSTBEG00000017730	-	79	71.806	ENSMAMG00000009082	chd2	73	71.806	Mastacembelus_armatus
ENSTBEG00000017730	-	76	70.652	ENSMZEG00005021333	chd2	68	66.990	Maylandia_zebra
ENSTBEG00000017730	-	80	88.106	ENSMGAG00000008966	-	67	88.106	Meleagris_gallopavo
ENSTBEG00000017730	-	79	100.000	ENSMICG00000000332	-	67	100.000	Microcebus_murinus
ENSTBEG00000017730	-	83	96.916	ENSMOCG00000015124	Chd2	71	96.916	Microtus_ochrogaster
ENSTBEG00000017730	-	83	94.273	ENSMODG00000013158	-	72	94.273	Monodelphis_domestica
ENSTBEG00000017730	-	72	75.510	ENSMALG00000007755	chd2	67	70.044	Monopterus_albus
ENSTBEG00000017730	-	83	96.476	MGP_CAROLIEiJ_G0029860	Chd2	77	96.476	Mus_caroli
ENSTBEG00000017730	-	83	96.035	ENSMUSG00000078671	Chd2	77	96.035	Mus_musculus
ENSTBEG00000017730	-	83	95.614	MGP_PahariEiJ_G0013082	Chd2	77	95.614	Mus_pahari
ENSTBEG00000017730	-	83	96.035	MGP_SPRETEiJ_G0030962	Chd2	77	96.035	Mus_spretus
ENSTBEG00000017730	-	83	97.797	ENSMPUG00000017577	-	71	97.797	Mustela_putorius_furo
ENSTBEG00000017730	-	83	96.491	ENSMLUG00000009292	-	71	96.491	Myotis_lucifugus
ENSTBEG00000017730	-	83	97.357	ENSNGAG00000010792	Chd2	71	97.357	Nannospalax_galili
ENSTBEG00000017730	-	78	71.806	ENSNBRG00000020591	chd2	62	71.806	Neolamprologus_brichardi
ENSTBEG00000017730	-	75	97.797	ENSNLEG00000012349	-	75	97.797	Nomascus_leucogenys
ENSTBEG00000017730	-	64	100.000	ENSMEUG00000001522	-	59	100.000	Notamacropus_eugenii
ENSTBEG00000017730	-	83	96.916	ENSODEG00000016028	-	72	96.916	Octodon_degus
ENSTBEG00000017730	-	78	71.806	ENSONIG00000015136	chd2	73	71.806	Oreochromis_niloticus
ENSTBEG00000017730	-	70	92.000	ENSOANG00000004385	-	74	92.000	Ornithorhynchus_anatinus
ENSTBEG00000017730	-	85	91.189	ENSOCUG00000001628	-	93	88.100	Oryctolagus_cuniculus
ENSTBEG00000017730	-	78	70.044	ENSORLG00000008403	chd2	94	62.636	Oryzias_latipes
ENSTBEG00000017730	-	78	70.485	ENSORLG00020004138	chd2	73	70.485	Oryzias_latipes_hni
ENSTBEG00000017730	-	79	68.282	ENSOMEG00000005831	chd2	73	68.282	Oryzias_melastigma
ENSTBEG00000017730	-	78	98.678	ENSOGAG00000010399	-	66	98.678	Otolemur_garnettii
ENSTBEG00000017730	-	85	96.916	ENSOARG00000010343	-	77	96.916	Ovis_aries
ENSTBEG00000017730	-	83	96.930	ENSPPAG00000030381	-	78	96.930	Pan_paniscus
ENSTBEG00000017730	-	83	97.797	ENSPTRG00000007478	CHD2	71	97.797	Pan_troglodytes
ENSTBEG00000017730	-	83	97.357	ENSPANG00000033355	-	77	97.357	Papio_anubis
ENSTBEG00000017730	-	75	72.414	ENSPKIG00000000495	chd2	72	82.500	Paramormyrops_kingsleyae
ENSTBEG00000017730	-	64	64.912	ENSPMGG00000009941	chd2	68	64.912	Periophthalmus_magnuspinnatus
ENSTBEG00000017730	-	83	96.476	ENSPEMG00000019507	Chd2	71	96.476	Peromyscus_maniculatus_bairdii
ENSTBEG00000017730	-	73	94.714	ENSPCIG00000009417	-	75	94.714	Phascolarctos_cinereus
ENSTBEG00000017730	-	74	72.687	ENSPFOG00000007050	chd2	73	72.687	Poecilia_formosa
ENSTBEG00000017730	-	74	72.687	ENSPLAG00000005067	chd2	73	72.687	Poecilia_latipinna
ENSTBEG00000017730	-	74	72.687	ENSPMEG00000019628	chd2	73	72.687	Poecilia_mexicana
ENSTBEG00000017730	-	78	97.797	ENSPPYG00000006799	-	68	97.797	Pongo_abelii
ENSTBEG00000017730	-	83	99.119	ENSPCOG00000028084	-	71	99.119	Propithecus_coquereli
ENSTBEG00000017730	-	76	70.652	ENSPNYG00000010273	chd2	68	66.990	Pundamilia_nyererei
ENSTBEG00000017730	-	70	71.351	ENSPNAG00000016719	chd2	69	71.351	Pygocentrus_nattereri
ENSTBEG00000017730	-	83	97.357	ENSRNOG00000012716	Chd2	72	97.357	Rattus_norvegicus
ENSTBEG00000017730	-	79	97.838	ENSRBIG00000036875	-	71	97.838	Rhinopithecus_bieti
ENSTBEG00000017730	-	83	96.916	ENSRROG00000041087	-	77	96.916	Rhinopithecus_roxellana
ENSTBEG00000017730	-	83	96.916	ENSSBOG00000023754	-	71	96.916	Saimiri_boliviensis_boliviensis
ENSTBEG00000017730	-	83	94.714	ENSSHAG00000012513	-	72	94.714	Sarcophilus_harrisii
ENSTBEG00000017730	-	79	71.053	ENSSFOG00015023759	chd2	75	82.500	Scleropages_formosus
ENSTBEG00000017730	-	78	71.366	ENSSMAG00000001726	chd2	73	71.366	Scophthalmus_maximus
ENSTBEG00000017730	-	78	71.366	ENSSLDG00000001146	chd2	72	71.366	Seriola_lalandi_dorsalis
ENSTBEG00000017730	-	66	97.826	ENSSARG00000014112	-	61	97.826	Sorex_araneus
ENSTBEG00000017730	-	82	86.344	ENSSPUG00000011266	-	73	86.344	Sphenodon_punctatus
ENSTBEG00000017730	-	78	72.247	ENSSPAG00000016452	chd2	67	72.247	Stegastes_partitus
ENSTBEG00000017730	-	83	97.797	ENSSSCG00000002266	-	86	97.797	Sus_scrofa
ENSTBEG00000017730	-	83	88.987	ENSTGUG00000008540	-	71	88.987	Taeniopygia_guttata
ENSTBEG00000017730	-	75	89.256	ENSTRUG00000008842	chd2	64	89.256	Takifugu_rubripes
ENSTBEG00000017730	-	74	73.684	ENSTNIG00000010760	chd2	92	73.684	Tetraodon_nigroviridis
ENSTBEG00000017730	-	90	97.797	ENSTTRG00000000430	-	72	97.797	Tursiops_truncatus
ENSTBEG00000017730	-	83	96.916	ENSUMAG00000000083	-	79	96.916	Ursus_maritimus
ENSTBEG00000017730	-	70	96.000	ENSVPAG00000009645	-	62	96.000	Vicugna_pacos
ENSTBEG00000017730	-	67	72.704	ENSXETG00000024129	chd2	68	71.304	Xenopus_tropicalis
ENSTBEG00000017730	-	74	73.128	ENSXCOG00000020255	chd2	72	73.128	Xiphophorus_couchianus
ENSTBEG00000017730	-	74	72.247	ENSXMAG00000002707	chd2	73	72.247	Xiphophorus_maculatus