EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000017741 (Gene tree)
Gene ID: -
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrGeneScaffold_4574:165467-168202
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000015431	RNA_ligase	PF09414.10	9.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000017741	LIG4-201	2736	-	ENSTBEP00000015431	911 (aa)	-	UPI0000F60C2F

Gene Model

Click here to download ENSTBEG00000017741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000017741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000017741	LIG4	100	91.438	ENSG00000174405	LIG4	100	91.438	Homo_sapiens
ENSTBEG00000017741	LIG4	99	65.532	ENSAPOG00000000866	lig4	99	65.532	Acanthochromis_polyacanthus
ENSTBEG00000017741	LIG4	100	87.706	ENSAMEG00000019685	LIG4	99	87.706	Ailuropoda_melanoleuca
ENSTBEG00000017741	LIG4	99	66.557	ENSACIG00000018309	lig4	99	66.557	Amphilophus_citrinellus
ENSTBEG00000017741	LIG4	99	65.642	ENSAOCG00000011768	lig4	99	65.642	Amphiprion_ocellaris
ENSTBEG00000017741	LIG4	99	65.752	ENSAPEG00000017815	lig4	99	65.752	Amphiprion_percula
ENSTBEG00000017741	LIG4	99	65.639	ENSATEG00000005583	lig4	99	65.495	Anabas_testudineus
ENSTBEG00000017741	LIG4	97	74.773	ENSAPLG00000001673	LIG4	99	74.773	Anas_platyrhynchos
ENSTBEG00000017741	LIG4	99	75.912	ENSACAG00000014566	LIG4	99	75.912	Anolis_carolinensis
ENSTBEG00000017741	LIG4	100	90.779	ENSANAG00000012446	LIG4	100	90.779	Aotus_nancymaae
ENSTBEG00000017741	LIG4	99	65.677	ENSACLG00000027051	lig4	99	65.677	Astatotilapia_calliptera
ENSTBEG00000017741	LIG4	99	64.114	ENSAMXG00000008192	lig4	94	64.114	Astyanax_mexicanus
ENSTBEG00000017741	LIG4	100	88.035	ENSBTAG00000015868	LIG4	100	88.035	Bos_taurus
ENSTBEG00000017741	LIG4	100	89.791	ENSCJAG00000014689	LIG4	100	89.791	Callithrix_jacchus
ENSTBEG00000017741	LIG4	100	89.243	ENSCAFG00000006031	LIG4	100	89.243	Canis_familiaris
ENSTBEG00000017741	LIG4	100	89.243	ENSCAFG00020021230	LIG4	100	89.243	Canis_lupus_dingo
ENSTBEG00000017741	LIG4	100	87.486	ENSCHIG00000001019	LIG4	100	87.486	Capra_hircus
ENSTBEG00000017741	LIG4	99	87.375	ENSCAPG00000006284	LIG4	99	87.375	Cavia_aperea
ENSTBEG00000017741	LIG4	100	87.377	ENSCPOG00000014266	LIG4	100	87.377	Cavia_porcellus
ENSTBEG00000017741	LIG4	100	89.682	ENSCCAG00000019971	LIG4	100	89.682	Cebus_capucinus
ENSTBEG00000017741	LIG4	100	90.889	ENSCATG00000021075	LIG4	100	90.889	Cercocebus_atys
ENSTBEG00000017741	LIG4	100	88.584	ENSCLAG00000003376	LIG4	100	88.584	Chinchilla_lanigera
ENSTBEG00000017741	LIG4	100	90.999	ENSCSAG00000000211	LIG4	100	90.999	Chlorocebus_sabaeus
ENSTBEG00000017741	LIG4	99	79.139	ENSCPBG00000023291	LIG4	100	78.540	Chrysemys_picta_bellii
ENSTBEG00000017741	LIG4	68	45.787	ENSCING00000009536	-	95	45.787	Ciona_intestinalis
ENSTBEG00000017741	LIG4	83	45.598	ENSCSAVG00000010336	-	98	45.598	Ciona_savignyi
ENSTBEG00000017741	LIG4	100	90.779	ENSCANG00000005805	LIG4	100	90.779	Colobus_angolensis_palliatus
ENSTBEG00000017741	LIG4	100	87.061	ENSCGRG00001012072	Lig4	100	87.061	Cricetulus_griseus_chok1gshd
ENSTBEG00000017741	LIG4	100	87.061	ENSCGRG00000013417	Lig4	100	87.061	Cricetulus_griseus_crigri
ENSTBEG00000017741	LIG4	97	65.795	ENSCSEG00000013905	lig4	95	65.795	Cynoglossus_semilaevis
ENSTBEG00000017741	LIG4	99	65.559	ENSCVAG00000007896	lig4	99	65.559	Cyprinodon_variegatus
ENSTBEG00000017741	LIG4	99	63.858	ENSDARG00000060620	lig4	98	63.858	Danio_rerio
ENSTBEG00000017741	LIG4	100	88.706	ENSDNOG00000000513	LIG4	100	88.706	Dasypus_novemcinctus
ENSTBEG00000017741	LIG4	100	87.267	ENSDORG00000027303	Lig4	100	87.267	Dipodomys_ordii
ENSTBEG00000017741	LIG4	89	31.765	FBgn0030506	Lig4	91	31.765	Drosophila_melanogaster
ENSTBEG00000017741	LIG4	99	84.368	ENSETEG00000015563	LIG4	100	84.590	Echinops_telfairi
ENSTBEG00000017741	LIG4	99	44.281	ENSEBUG00000014243	lig4	99	44.281	Eptatretus_burgeri
ENSTBEG00000017741	LIG4	100	90.889	ENSEASG00005022073	LIG4	100	90.889	Equus_asinus_asinus
ENSTBEG00000017741	LIG4	100	90.450	ENSECAG00000003257	LIG4	100	90.450	Equus_caballus
ENSTBEG00000017741	LIG4	99	66.373	ENSELUG00000006787	lig4	99	66.373	Esox_lucius
ENSTBEG00000017741	LIG4	100	88.694	ENSFCAG00000031985	LIG4	100	88.694	Felis_catus
ENSTBEG00000017741	LIG4	89	75.400	ENSFALG00000004214	LIG4	98	75.400	Ficedula_albicollis
ENSTBEG00000017741	LIG4	100	87.925	ENSFDAG00000008973	LIG4	100	87.925	Fukomys_damarensis
ENSTBEG00000017741	LIG4	99	64.784	ENSFHEG00000007398	lig4	89	65.116	Fundulus_heteroclitus
ENSTBEG00000017741	LIG4	85	64.827	ENSGMOG00000012843	lig4	99	64.827	Gadus_morhua
ENSTBEG00000017741	LIG4	100	74.454	ENSGALG00000016854	LIG4	100	74.454	Gallus_gallus
ENSTBEG00000017741	LIG4	99	65.145	ENSGAFG00000019779	lig4	95	65.055	Gambusia_affinis
ENSTBEG00000017741	LIG4	99	62.901	ENSGACG00000014135	lig4	99	62.901	Gasterosteus_aculeatus
ENSTBEG00000017741	LIG4	100	91.328	ENSGGOG00000027771	LIG4	100	91.328	Gorilla_gorilla
ENSTBEG00000017741	LIG4	99	65.457	ENSHBUG00000006245	lig4	99	65.457	Haplochromis_burtoni
ENSTBEG00000017741	LIG4	100	87.706	ENSHGLG00000000718	LIG4	100	87.706	Heterocephalus_glaber_female
ENSTBEG00000017741	LIG4	100	87.706	ENSHGLG00100003265	LIG4	100	87.706	Heterocephalus_glaber_male
ENSTBEG00000017741	LIG4	99	63.736	ENSHCOG00000012010	lig4	99	63.846	Hippocampus_comes
ENSTBEG00000017741	LIG4	99	64.945	ENSIPUG00000013748	lig4	99	64.945	Ictalurus_punctatus
ENSTBEG00000017741	LIG4	100	89.133	ENSSTOG00000024303	LIG4	100	89.133	Ictidomys_tridecemlineatus
ENSTBEG00000017741	LIG4	100	87.706	ENSJJAG00000006750	Lig4	100	87.706	Jaculus_jaculus
ENSTBEG00000017741	LIG4	99	65.116	ENSKMAG00000001149	lig4	99	65.116	Kryptolebias_marmoratus
ENSTBEG00000017741	LIG4	91	65.264	ENSLBEG00000014578	lig4	100	65.264	Labrus_bergylta
ENSTBEG00000017741	LIG4	99	72.235	ENSLACG00000003282	LIG4	99	72.235	Latimeria_chalumnae
ENSTBEG00000017741	LIG4	99	70.330	ENSLOCG00000008901	lig4	98	70.330	Lepisosteus_oculatus
ENSTBEG00000017741	LIG4	100	86.637	ENSLAFG00000031152	LIG4	100	86.637	Loxodonta_africana
ENSTBEG00000017741	LIG4	100	90.889	ENSMFAG00000037235	LIG4	100	90.889	Macaca_fascicularis
ENSTBEG00000017741	LIG4	100	90.889	ENSMMUG00000008874	LIG4	100	90.889	Macaca_mulatta
ENSTBEG00000017741	LIG4	100	90.889	ENSMNEG00000023575	LIG4	100	90.889	Macaca_nemestrina
ENSTBEG00000017741	LIG4	100	90.999	ENSMLEG00000026720	LIG4	100	90.999	Mandrillus_leucophaeus
ENSTBEG00000017741	LIG4	99	65.714	ENSMAMG00000008472	lig4	99	65.714	Mastacembelus_armatus
ENSTBEG00000017741	LIG4	99	65.677	ENSMZEG00005001855	lig4	99	65.677	Maylandia_zebra
ENSTBEG00000017741	LIG4	100	74.782	ENSMGAG00000015532	LIG4	100	74.782	Meleagris_gallopavo
ENSTBEG00000017741	LIG4	100	84.303	ENSMOCG00000019000	Lig4	100	84.303	Microtus_ochrogaster
ENSTBEG00000017741	LIG4	99	64.341	ENSMMOG00000004390	lig4	99	64.341	Mola_mola
ENSTBEG00000017741	LIG4	100	83.425	ENSMODG00000025064	LIG4	100	83.425	Monodelphis_domestica
ENSTBEG00000017741	LIG4	99	65.227	ENSMALG00000008555	lig4	99	65.227	Monopterus_albus
ENSTBEG00000017741	LIG4	100	87.267	MGP_CAROLIEiJ_G0030809	Lig4	100	87.267	Mus_caroli
ENSTBEG00000017741	LIG4	100	87.157	ENSMUSG00000049717	Lig4	100	87.157	Mus_musculus
ENSTBEG00000017741	LIG4	100	87.267	MGP_PahariEiJ_G0021270	Lig4	100	87.267	Mus_pahari
ENSTBEG00000017741	LIG4	100	87.047	MGP_SPRETEiJ_G0031917	Lig4	100	87.047	Mus_spretus
ENSTBEG00000017741	LIG4	100	87.706	ENSMPUG00000018675	LIG4	100	87.706	Mustela_putorius_furo
ENSTBEG00000017741	LIG4	100	89.901	ENSMLUG00000001267	LIG4	100	89.901	Myotis_lucifugus
ENSTBEG00000017741	LIG4	100	87.596	ENSNGAG00000013258	Lig4	100	87.596	Nannospalax_galili
ENSTBEG00000017741	LIG4	99	65.787	ENSNBRG00000021252	lig4	99	65.787	Neolamprologus_brichardi
ENSTBEG00000017741	LIG4	100	90.889	ENSNLEG00000007888	LIG4	100	90.889	Nomascus_leucogenys
ENSTBEG00000017741	LIG4	100	86.608	ENSOPRG00000005765	LIG4	100	86.608	Ochotona_princeps
ENSTBEG00000017741	LIG4	100	87.157	ENSODEG00000019683	LIG4	100	87.157	Octodon_degus
ENSTBEG00000017741	LIG4	99	65.677	ENSONIG00000011969	lig4	98	65.677	Oreochromis_niloticus
ENSTBEG00000017741	LIG4	100	90.670	ENSOCUG00000015734	LIG4	100	90.670	Oryctolagus_cuniculus
ENSTBEG00000017741	LIG4	99	63.956	ENSORLG00000004041	lig4	99	63.956	Oryzias_latipes
ENSTBEG00000017741	LIG4	99	64.505	ENSORLG00020019607	lig4	99	64.505	Oryzias_latipes_hni
ENSTBEG00000017741	LIG4	99	64.066	ENSORLG00015017754	lig4	99	64.066	Oryzias_latipes_hsok
ENSTBEG00000017741	LIG4	74	69.379	ENSOMEG00000003459	lig4	98	69.379	Oryzias_melastigma
ENSTBEG00000017741	LIG4	100	90.132	ENSOGAG00000032120	LIG4	99	90.132	Otolemur_garnettii
ENSTBEG00000017741	LIG4	82	89.396	ENSOARG00000005590	LIG4	98	89.396	Ovis_aries
ENSTBEG00000017741	LIG4	100	90.999	ENSPPAG00000032998	LIG4	100	90.999	Pan_paniscus
ENSTBEG00000017741	LIG4	100	89.243	ENSPPRG00000017804	LIG4	100	89.243	Panthera_pardus
ENSTBEG00000017741	LIG4	100	89.133	ENSPTIG00000010051	LIG4	100	89.133	Panthera_tigris_altaica
ENSTBEG00000017741	LIG4	100	91.109	ENSPTRG00000006025	LIG4	100	91.109	Pan_troglodytes
ENSTBEG00000017741	LIG4	100	90.999	ENSPANG00000007562	LIG4	100	90.999	Papio_anubis
ENSTBEG00000017741	LIG4	99	66.740	ENSPKIG00000011645	lig4	98	66.740	Paramormyrops_kingsleyae
ENSTBEG00000017741	LIG4	99	78.681	ENSPSIG00000001504	LIG4	99	78.681	Pelodiscus_sinensis
ENSTBEG00000017741	LIG4	99	63.111	ENSPMGG00000013486	lig4	99	62.678	Periophthalmus_magnuspinnatus
ENSTBEG00000017741	LIG4	100	86.732	ENSPEMG00000000076	Lig4	100	86.732	Peromyscus_maniculatus_bairdii
ENSTBEG00000017741	LIG4	100	83.772	ENSPCIG00000021882	LIG4	100	83.772	Phascolarctos_cinereus
ENSTBEG00000017741	LIG4	99	65.184	ENSPFOG00000000797	lig4	99	64.945	Poecilia_formosa
ENSTBEG00000017741	LIG4	99	65.072	ENSPLAG00000001196	lig4	99	64.835	Poecilia_latipinna
ENSTBEG00000017741	LIG4	99	65.184	ENSPMEG00000021353	lig4	99	65.055	Poecilia_mexicana
ENSTBEG00000017741	LIG4	99	64.961	ENSPREG00000007323	lig4	99	64.764	Poecilia_reticulata
ENSTBEG00000017741	LIG4	100	91.218	ENSPPYG00000005540	LIG4	100	91.218	Pongo_abelii
ENSTBEG00000017741	LIG4	100	89.462	ENSPVAG00000016403	LIG4	100	89.462	Pteropus_vampyrus
ENSTBEG00000017741	LIG4	99	65.567	ENSPNYG00000009660	lig4	99	65.567	Pundamilia_nyererei
ENSTBEG00000017741	LIG4	100	64.474	ENSPNAG00000028069	LIG4	100	64.474	Pygocentrus_nattereri
ENSTBEG00000017741	LIG4	100	64.474	ENSPNAG00000028056	lig4	100	64.474	Pygocentrus_nattereri
ENSTBEG00000017741	LIG4	100	85.401	ENSRNOG00000014605	Lig4	100	85.401	Rattus_norvegicus
ENSTBEG00000017741	LIG4	100	89.352	ENSRBIG00000039962	LIG4	100	89.352	Rhinopithecus_bieti
ENSTBEG00000017741	LIG4	100	90.450	ENSRROG00000006040	LIG4	100	90.450	Rhinopithecus_roxellana
ENSTBEG00000017741	LIG4	100	89.572	ENSSBOG00000019029	LIG4	100	89.572	Saimiri_boliviensis_boliviensis
ENSTBEG00000017741	LIG4	100	80.571	ENSSHAG00000009525	LIG4	100	80.571	Sarcophilus_harrisii
ENSTBEG00000017741	LIG4	100	65.175	ENSSFOG00015012835	lig4	100	65.175	Scleropages_formosus
ENSTBEG00000017741	LIG4	99	63.012	ENSSMAG00000011267	lig4	99	63.012	Scophthalmus_maximus
ENSTBEG00000017741	LIG4	99	65.854	ENSSDUG00000010343	lig4	98	65.854	Seriola_dumerili
ENSTBEG00000017741	LIG4	99	63.956	ENSSLDG00000003239	lig4	99	63.956	Seriola_lalandi_dorsalis
ENSTBEG00000017741	LIG4	100	82.495	ENSSARG00000006573	LIG4	100	82.495	Sorex_araneus
ENSTBEG00000017741	LIG4	93	77.962	ENSSPUG00000002444	LIG4	100	77.962	Sphenodon_punctatus
ENSTBEG00000017741	LIG4	99	65.055	ENSSPAG00000001609	lig4	99	65.055	Stegastes_partitus
ENSTBEG00000017741	LIG4	100	87.596	ENSSSCG00000009540	LIG4	100	87.596	Sus_scrofa
ENSTBEG00000017741	LIG4	99	74.779	ENSTGUG00000010795	LIG4	99	74.779	Taeniopygia_guttata
ENSTBEG00000017741	LIG4	99	64.725	ENSTRUG00000009984	lig4	99	64.725	Takifugu_rubripes
ENSTBEG00000017741	LIG4	99	65.165	ENSTNIG00000010348	lig4	99	65.385	Tetraodon_nigroviridis
ENSTBEG00000017741	LIG4	100	88.694	ENSTTRG00000012660	LIG4	100	88.694	Tursiops_truncatus
ENSTBEG00000017741	LIG4	100	87.816	ENSUAMG00000003773	LIG4	100	87.816	Ursus_americanus
ENSTBEG00000017741	LIG4	99	71.586	ENSXETG00000002654	lig4	99	71.586	Xenopus_tropicalis
ENSTBEG00000017741	LIG4	99	64.961	ENSXCOG00000017401	lig4	99	64.505	Xiphophorus_couchianus
ENSTBEG00000017741	LIG4	99	65.333	ENSXMAG00000015142	lig4	99	64.874	Xiphophorus_maculatus