EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000000250 (Gene tree)
Gene ID: -
Gene Symbol: REXO1
Alias: EloA-BP1|KIAA1138|TCEB3BP1
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 38668 bases
Position: chr28:1324382-1363049
Accession: 24616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000000260	RNase_T	PF00929.24	7.6e-07	1	1
ENSTGUP00000000256	RNase_T	PF00929.24	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000000260	REXO1-201	1890	-	ENSTGUP00000000256	629 (aa)	-	H0YPQ6
ENSTGUT00000000264	REXO1-202	3552	-	ENSTGUP00000000260	1184 (aa)	-	H0YPR0

Gene Model

Click here to download ENSTGUG00000000250's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000000250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000000250	REXO1	98	67.727	ENSG00000079313	REXO1	94	72.581	Homo_sapiens
ENSTGUG00000000250	REXO1	98	90.720	ENSAPLG00000011954	REXO1	100	82.944	Anas_platyrhynchos
ENSTGUG00000000250	REXO1	83	63.148	ENSCGRG00000014248	Rexo1	97	67.901	Cricetulus_griseus_crigri
ENSTGUG00000000250	REXO1	84	54.312	ENSDNOG00000024400	-	97	54.927	Dasypus_novemcinctus
ENSTGUG00000000250	REXO1	97	90.032	ENSGALG00000001043	REXO1	100	83.232	Gallus_gallus
ENSTGUG00000000250	REXO1	98	84.640	ENSGAGG00000022162	REXO1	99	71.825	Gopherus_agassizii
ENSTGUG00000000250	REXO1	97	90.177	ENSMGAG00000002267	REXO1	100	81.881	Meleagris_gallopavo
ENSTGUG00000000250	REXO1	79	68.750	ENSPTRG00000010213	REXO1	93	70.040	Pan_troglodytes