EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000000773 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 3276 bases
Position: chr24:7446211-7449486
Accession: 100190305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000000793	PseudoU_synth_2	PF00849.22	4.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000000804	RPUSD4-201	1374	XM_012570763	ENSTGUP00000000793	296 (aa)	XP_012426217	H0YR85

Gene Model

Click here to download ENSTGUG00000000773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000000773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000000773	RPUSD4	63	31.250	ENSTGUG00000008744	RPUSD3	99	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000000773	RPUSD4	99	60.269	ENSG00000165526	RPUSD4	78	60.269	Homo_sapiens
ENSTGUG00000000773	RPUSD4	99	49.502	ENSAPOG00000011024	rpusd4	76	49.502	Acanthochromis_polyacanthus
ENSTGUG00000000773	RPUSD4	95	61.290	ENSAMEG00000005953	-	93	61.290	Ailuropoda_melanoleuca
ENSTGUG00000000773	RPUSD4	100	60.667	ENSAMEG00000000127	-	79	60.667	Ailuropoda_melanoleuca
ENSTGUG00000000773	RPUSD4	99	51.000	ENSACIG00000003533	rpusd4	88	51.000	Amphilophus_citrinellus
ENSTGUG00000000773	RPUSD4	99	49.834	ENSAOCG00000015409	rpusd4	75	49.834	Amphiprion_ocellaris
ENSTGUG00000000773	RPUSD4	99	50.166	ENSAPEG00000018935	rpusd4	75	50.166	Amphiprion_percula
ENSTGUG00000000773	RPUSD4	99	51.667	ENSATEG00000008059	rpusd4	75	51.667	Anabas_testudineus
ENSTGUG00000000773	RPUSD4	93	81.004	ENSAPLG00000013250	RPUSD4	99	79.322	Anas_platyrhynchos
ENSTGUG00000000773	RPUSD4	100	67.110	ENSACAG00000000189	RPUSD4	82	67.110	Anolis_carolinensis
ENSTGUG00000000773	RPUSD4	99	60.606	ENSANAG00000024050	RPUSD4	79	60.606	Aotus_nancymaae
ENSTGUG00000000773	RPUSD4	99	52.000	ENSACLG00000020996	rpusd4	77	52.000	Astatotilapia_calliptera
ENSTGUG00000000773	RPUSD4	99	52.667	ENSAMXG00000031479	rpusd4	84	52.667	Astyanax_mexicanus
ENSTGUG00000000773	RPUSD4	99	59.866	ENSBTAG00000020900	RPUSD4	79	59.866	Bos_taurus
ENSTGUG00000000773	RPUSD4	99	60.943	ENSCJAG00000042850	RPUSD4	74	60.943	Callithrix_jacchus
ENSTGUG00000000773	RPUSD4	99	61.204	ENSCAFG00000010488	RPUSD4	79	61.204	Canis_familiaris
ENSTGUG00000000773	RPUSD4	99	61.204	ENSCAFG00020010621	RPUSD4	79	61.204	Canis_lupus_dingo
ENSTGUG00000000773	RPUSD4	99	58.528	ENSCHIG00000009975	RPUSD4	79	58.528	Capra_hircus
ENSTGUG00000000773	RPUSD4	100	62.000	ENSTSYG00000008456	RPUSD4	79	62.000	Carlito_syrichta
ENSTGUG00000000773	RPUSD4	81	57.787	ENSCAPG00000006040	RPUSD4	94	57.787	Cavia_aperea
ENSTGUG00000000773	RPUSD4	100	60.667	ENSCPOG00000014971	RPUSD4	79	60.667	Cavia_porcellus
ENSTGUG00000000773	RPUSD4	99	61.279	ENSCCAG00000027838	RPUSD4	79	61.279	Cebus_capucinus
ENSTGUG00000000773	RPUSD4	99	60.269	ENSCATG00000041570	RPUSD4	78	60.269	Cercocebus_atys
ENSTGUG00000000773	RPUSD4	100	60.333	ENSCLAG00000016553	RPUSD4	79	60.333	Chinchilla_lanigera
ENSTGUG00000000773	RPUSD4	99	60.943	ENSCSAG00000002274	RPUSD4	78	60.943	Chlorocebus_sabaeus
ENSTGUG00000000773	RPUSD4	90	63.197	ENSCHOG00000010249	RPUSD4	94	63.197	Choloepus_hoffmanni
ENSTGUG00000000773	RPUSD4	95	72.632	ENSCPBG00000011175	RPUSD4	98	72.632	Chrysemys_picta_bellii
ENSTGUG00000000773	RPUSD4	90	40.794	ENSCSAVG00000000872	-	54	40.794	Ciona_savignyi
ENSTGUG00000000773	RPUSD4	99	60.269	ENSCANG00000039684	RPUSD4	78	60.269	Colobus_angolensis_palliatus
ENSTGUG00000000773	RPUSD4	100	60.000	ENSCGRG00001024141	Rpusd4	79	60.000	Cricetulus_griseus_chok1gshd
ENSTGUG00000000773	RPUSD4	100	60.000	ENSCGRG00000014415	Rpusd4	79	60.000	Cricetulus_griseus_crigri
ENSTGUG00000000773	RPUSD4	52	45.223	ENSCSEG00000006462	-	69	45.223	Cynoglossus_semilaevis
ENSTGUG00000000773	RPUSD4	99	54.333	ENSCVAG00000000392	rpusd4	85	54.333	Cyprinodon_variegatus
ENSTGUG00000000773	RPUSD4	99	54.000	ENSCVAG00000008761	rpusd4	77	54.000	Cyprinodon_variegatus
ENSTGUG00000000773	RPUSD4	100	52.000	ENSDARG00000012674	rpusd4	84	52.000	Danio_rerio
ENSTGUG00000000773	RPUSD4	100	63.000	ENSDNOG00000020026	RPUSD4	79	63.000	Dasypus_novemcinctus
ENSTGUG00000000773	RPUSD4	100	60.333	ENSDORG00000016717	Rpusd4	79	60.333	Dipodomys_ordii
ENSTGUG00000000773	RPUSD4	100	60.667	ENSETEG00000013953	RPUSD4	80	60.667	Echinops_telfairi
ENSTGUG00000000773	RPUSD4	100	59.000	ENSEASG00005022982	RPUSD4	79	59.000	Equus_asinus_asinus
ENSTGUG00000000773	RPUSD4	100	59.000	ENSECAG00000000557	RPUSD4	79	59.000	Equus_caballus
ENSTGUG00000000773	RPUSD4	77	60.000	ENSEEUG00000014036	RPUSD4	61	60.000	Erinaceus_europaeus
ENSTGUG00000000773	RPUSD4	100	56.333	ENSELUG00000008075	rpusd4	79	56.333	Esox_lucius
ENSTGUG00000000773	RPUSD4	100	61.000	ENSFCAG00000029789	RPUSD4	79	61.000	Felis_catus
ENSTGUG00000000773	RPUSD4	100	94.595	ENSFALG00000005171	RPUSD4	88	94.595	Ficedula_albicollis
ENSTGUG00000000773	RPUSD4	100	60.000	ENSFDAG00000014307	RPUSD4	80	60.000	Fukomys_damarensis
ENSTGUG00000000773	RPUSD4	98	52.203	ENSFHEG00000004329	rpusd4	76	52.203	Fundulus_heteroclitus
ENSTGUG00000000773	RPUSD4	99	51.515	ENSGMOG00000017726	rpusd4	89	51.515	Gadus_morhua
ENSTGUG00000000773	RPUSD4	93	79.570	ENSGALG00000024326	RPUSD4	82	77.703	Gallus_gallus
ENSTGUG00000000773	RPUSD4	99	50.333	ENSGAFG00000021559	rpusd4	77	50.333	Gambusia_affinis
ENSTGUG00000000773	RPUSD4	98	50.508	ENSGACG00000001657	rpusd4	96	50.182	Gasterosteus_aculeatus
ENSTGUG00000000773	RPUSD4	99	72.575	ENSGAGG00000000132	RPUSD4	83	72.575	Gopherus_agassizii
ENSTGUG00000000773	RPUSD4	99	60.269	ENSGGOG00000016494	RPUSD4	78	60.269	Gorilla_gorilla
ENSTGUG00000000773	RPUSD4	99	52.000	ENSHBUG00000022838	rpusd4	77	52.000	Haplochromis_burtoni
ENSTGUG00000000773	RPUSD4	100	59.000	ENSHGLG00000002285	RPUSD4	79	59.000	Heterocephalus_glaber_female
ENSTGUG00000000773	RPUSD4	100	59.000	ENSHGLG00100006385	RPUSD4	79	59.000	Heterocephalus_glaber_male
ENSTGUG00000000773	RPUSD4	99	50.671	ENSHCOG00000006612	rpusd4	76	50.671	Hippocampus_comes
ENSTGUG00000000773	RPUSD4	100	53.000	ENSIPUG00000023879	rusd4	78	53.000	Ictalurus_punctatus
ENSTGUG00000000773	RPUSD4	99	60.535	ENSSTOG00000025280	RPUSD4	82	60.535	Ictidomys_tridecemlineatus
ENSTGUG00000000773	RPUSD4	100	59.000	ENSJJAG00000018673	Rpusd4	81	59.000	Jaculus_jaculus
ENSTGUG00000000773	RPUSD4	99	51.667	ENSKMAG00000021805	rpusd4	78	51.667	Kryptolebias_marmoratus
ENSTGUG00000000773	RPUSD4	99	50.333	ENSLBEG00000020394	rpusd4	84	50.333	Labrus_bergylta
ENSTGUG00000000773	RPUSD4	99	60.403	ENSLACG00000011028	RPUSD4	75	60.403	Latimeria_chalumnae
ENSTGUG00000000773	RPUSD4	99	49.664	ENSLOCG00000003124	rpusd4	79	49.664	Lepisosteus_oculatus
ENSTGUG00000000773	RPUSD4	100	59.667	ENSLAFG00000005211	RPUSD4	100	51.370	Loxodonta_africana
ENSTGUG00000000773	RPUSD4	99	60.943	ENSMFAG00000039513	RPUSD4	78	60.943	Macaca_fascicularis
ENSTGUG00000000773	RPUSD4	99	61.279	ENSMMUG00000007933	RPUSD4	78	61.279	Macaca_mulatta
ENSTGUG00000000773	RPUSD4	99	60.943	ENSMNEG00000027414	RPUSD4	78	60.943	Macaca_nemestrina
ENSTGUG00000000773	RPUSD4	99	60.943	ENSMLEG00000042461	RPUSD4	78	60.943	Mandrillus_leucophaeus
ENSTGUG00000000773	RPUSD4	99	51.333	ENSMAMG00000023839	rpusd4	78	51.333	Mastacembelus_armatus
ENSTGUG00000000773	RPUSD4	99	52.000	ENSMZEG00005011999	rpusd4	77	52.000	Maylandia_zebra
ENSTGUG00000000773	RPUSD4	92	79.422	ENSMGAG00000000840	RPUSD4	91	77.027	Meleagris_gallopavo
ENSTGUG00000000773	RPUSD4	100	60.000	ENSMAUG00000010280	Rpusd4	79	60.000	Mesocricetus_auratus
ENSTGUG00000000773	RPUSD4	99	61.616	ENSMICG00000015979	RPUSD4	89	61.616	Microcebus_murinus
ENSTGUG00000000773	RPUSD4	98	59.864	ENSMOCG00000000661	Rpusd4	77	59.864	Microtus_ochrogaster
ENSTGUG00000000773	RPUSD4	98	51.525	ENSMMOG00000021731	rpusd4	88	51.525	Mola_mola
ENSTGUG00000000773	RPUSD4	95	64.561	ENSMODG00000004521	RPUSD4	73	64.561	Monodelphis_domestica
ENSTGUG00000000773	RPUSD4	99	51.000	ENSMALG00000005839	rpusd4	91	51.000	Monopterus_albus
ENSTGUG00000000773	RPUSD4	100	61.333	MGP_CAROLIEiJ_G0031954	Rpusd4	79	61.333	Mus_caroli
ENSTGUG00000000773	RPUSD4	100	61.333	ENSMUSG00000032044	Rpusd4	79	61.333	Mus_musculus
ENSTGUG00000000773	RPUSD4	100	61.000	MGP_PahariEiJ_G0014819	Rpusd4	79	61.000	Mus_pahari
ENSTGUG00000000773	RPUSD4	100	61.333	MGP_SPRETEiJ_G0033078	Rpusd4	79	61.333	Mus_spretus
ENSTGUG00000000773	RPUSD4	100	60.667	ENSMPUG00000006608	RPUSD4	79	60.667	Mustela_putorius_furo
ENSTGUG00000000773	RPUSD4	84	61.265	ENSMLUG00000029348	-	99	61.265	Myotis_lucifugus
ENSTGUG00000000773	RPUSD4	99	61.409	ENSMLUG00000017328	-	78	61.409	Myotis_lucifugus
ENSTGUG00000000773	RPUSD4	100	62.333	ENSNGAG00000020847	Rpusd4	79	62.333	Nannospalax_galili
ENSTGUG00000000773	RPUSD4	99	52.000	ENSNBRG00000005207	rpusd4	87	52.000	Neolamprologus_brichardi
ENSTGUG00000000773	RPUSD4	99	60.943	ENSNLEG00000007465	RPUSD4	78	60.943	Nomascus_leucogenys
ENSTGUG00000000773	RPUSD4	100	64.000	ENSMEUG00000004370	RPUSD4	80	64.000	Notamacropus_eugenii
ENSTGUG00000000773	RPUSD4	50	58.784	ENSOPRG00000013141	-	55	58.784	Ochotona_princeps
ENSTGUG00000000773	RPUSD4	100	60.000	ENSODEG00000004577	RPUSD4	79	60.000	Octodon_degus
ENSTGUG00000000773	RPUSD4	99	52.333	ENSONIG00000018879	rpusd4	81	52.333	Oreochromis_niloticus
ENSTGUG00000000773	RPUSD4	97	63.514	ENSOANG00000007247	RPUSD4	95	63.423	Ornithorhynchus_anatinus
ENSTGUG00000000773	RPUSD4	100	61.130	ENSOCUG00000017039	RPUSD4	80	61.130	Oryctolagus_cuniculus
ENSTGUG00000000773	RPUSD4	96	51.034	ENSORLG00000002750	rpusd4	80	51.034	Oryzias_latipes
ENSTGUG00000000773	RPUSD4	96	50.690	ENSORLG00020002044	rpusd4	73	50.690	Oryzias_latipes_hni
ENSTGUG00000000773	RPUSD4	96	51.034	ENSORLG00015020034	rpusd4	72	51.034	Oryzias_latipes_hsok
ENSTGUG00000000773	RPUSD4	96	52.941	ENSOMEG00000004861	rpusd4	71	52.941	Oryzias_melastigma
ENSTGUG00000000773	RPUSD4	100	63.000	ENSOGAG00000008922	RPUSD4	79	63.000	Otolemur_garnettii
ENSTGUG00000000773	RPUSD4	99	58.863	ENSOARG00000012238	RPUSD4	78	58.863	Ovis_aries
ENSTGUG00000000773	RPUSD4	99	60.269	ENSPPAG00000042883	RPUSD4	73	60.269	Pan_paniscus
ENSTGUG00000000773	RPUSD4	100	61.000	ENSPPRG00000003081	RPUSD4	79	61.000	Panthera_pardus
ENSTGUG00000000773	RPUSD4	100	61.000	ENSPTIG00000012059	RPUSD4	85	61.000	Panthera_tigris_altaica
ENSTGUG00000000773	RPUSD4	99	60.269	ENSPTRG00000004454	RPUSD4	78	60.269	Pan_troglodytes
ENSTGUG00000000773	RPUSD4	99	60.943	ENSPANG00000015040	RPUSD4	78	60.943	Papio_anubis
ENSTGUG00000000773	RPUSD4	99	59.933	ENSPKIG00000023986	rpusd4	76	59.933	Paramormyrops_kingsleyae
ENSTGUG00000000773	RPUSD4	99	70.569	ENSPSIG00000014268	RPUSD4	95	70.569	Pelodiscus_sinensis
ENSTGUG00000000773	RPUSD4	99	51.495	ENSPMGG00000002806	rpusd4	84	52.013	Periophthalmus_magnuspinnatus
ENSTGUG00000000773	RPUSD4	100	52.333	ENSPEMG00000000278	Rpusd4	78	52.333	Peromyscus_maniculatus_bairdii
ENSTGUG00000000773	RPUSD4	100	41.994	ENSPMAG00000008183	rpusd4	96	41.994	Petromyzon_marinus
ENSTGUG00000000773	RPUSD4	100	64.333	ENSPCIG00000010212	RPUSD4	82	64.333	Phascolarctos_cinereus
ENSTGUG00000000773	RPUSD4	99	49.338	ENSPFOG00000019030	rpusd4	79	49.338	Poecilia_formosa
ENSTGUG00000000773	RPUSD4	99	50.000	ENSPLAG00000016848	rpusd4	76	50.000	Poecilia_latipinna
ENSTGUG00000000773	RPUSD4	99	50.000	ENSPMEG00000017534	rpusd4	76	50.000	Poecilia_mexicana
ENSTGUG00000000773	RPUSD4	95	50.352	ENSPREG00000005689	rpusd4	73	50.352	Poecilia_reticulata
ENSTGUG00000000773	RPUSD4	99	60.606	ENSPPYG00000004043	RPUSD4	78	60.606	Pongo_abelii
ENSTGUG00000000773	RPUSD4	77	56.497	ENSPCAG00000000753	RPUSD4	62	56.497	Procavia_capensis
ENSTGUG00000000773	RPUSD4	100	55.667	ENSPCOG00000020694	RPUSD4	79	55.667	Propithecus_coquereli
ENSTGUG00000000773	RPUSD4	100	59.667	ENSPVAG00000000988	RPUSD4	80	59.667	Pteropus_vampyrus
ENSTGUG00000000773	RPUSD4	99	52.000	ENSPNYG00000009652	rpusd4	77	52.000	Pundamilia_nyererei
ENSTGUG00000000773	RPUSD4	100	50.667	ENSPNAG00000012264	rpusd4	80	50.667	Pygocentrus_nattereri
ENSTGUG00000000773	RPUSD4	100	60.667	ENSRNOG00000011567	Rpusd4	79	60.667	Rattus_norvegicus
ENSTGUG00000000773	RPUSD4	99	60.606	ENSRBIG00000034842	RPUSD4	78	60.606	Rhinopithecus_bieti
ENSTGUG00000000773	RPUSD4	99	60.606	ENSRROG00000039753	RPUSD4	78	60.606	Rhinopithecus_roxellana
ENSTGUG00000000773	RPUSD4	99	61.279	ENSSBOG00000030413	RPUSD4	79	61.279	Saimiri_boliviensis_boliviensis
ENSTGUG00000000773	RPUSD4	100	64.667	ENSSHAG00000008304	RPUSD4	99	64.667	Sarcophilus_harrisii
ENSTGUG00000000773	RPUSD4	99	59.197	ENSSFOG00015006203	rpusd4	81	59.197	Scleropages_formosus
ENSTGUG00000000773	RPUSD4	99	53.333	ENSSMAG00000020978	rpusd4	79	53.378	Scophthalmus_maximus
ENSTGUG00000000773	RPUSD4	99	51.505	ENSSDUG00000013399	rpusd4	79	51.505	Seriola_dumerili
ENSTGUG00000000773	RPUSD4	99	51.505	ENSSLDG00000023507	rpusd4	79	51.505	Seriola_lalandi_dorsalis
ENSTGUG00000000773	RPUSD4	99	70.370	ENSSPUG00000001401	RPUSD4	83	70.333	Sphenodon_punctatus
ENSTGUG00000000773	RPUSD4	99	50.333	ENSSPAG00000012163	rpusd4	77	50.333	Stegastes_partitus
ENSTGUG00000000773	RPUSD4	100	58.667	ENSSSCG00000015233	RPUSD4	79	58.667	Sus_scrofa
ENSTGUG00000000773	RPUSD4	99	50.000	ENSTRUG00000012283	rpusd4	78	50.000	Takifugu_rubripes
ENSTGUG00000000773	RPUSD4	99	49.667	ENSTNIG00000014676	rpusd4	77	49.667	Tetraodon_nigroviridis
ENSTGUG00000000773	RPUSD4	100	58.667	ENSTTRG00000001555	RPUSD4	79	58.667	Tursiops_truncatus
ENSTGUG00000000773	RPUSD4	100	61.333	ENSUMAG00000002219	RPUSD4	79	61.333	Ursus_maritimus
ENSTGUG00000000773	RPUSD4	69	59.314	ENSVPAG00000001066	RPUSD4	77	59.314	Vicugna_pacos
ENSTGUG00000000773	RPUSD4	99	61.204	ENSVVUG00000020101	RPUSD4	79	61.204	Vulpes_vulpes
ENSTGUG00000000773	RPUSD4	99	50.333	ENSXCOG00000004676	rpusd4	79	50.000	Xiphophorus_couchianus
ENSTGUG00000000773	RPUSD4	99	50.667	ENSXMAG00000023351	rpusd4	77	50.667	Xiphophorus_maculatus