EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000001105 (Gene tree)
Gene ID: 100221977
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 13533 bases
Position: chr2:17456388-17469920
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000001140	MMR_HSR1	PF01926.23	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000001152	-	889	-	ENSTGUP00000001140	234 (aa)	-	H0YS80

Gene Model

Click here to download ENSTGUG00000001105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000001105	-	81	33.505	ENSTGUG00000007832	RAB7A	81	33.505
ENSTGUG00000001105	-	82	32.308	ENSTGUG00000004727	MRAS	80	32.308
ENSTGUG00000001105	-	85	32.161	ENSTGUG00000012794	RAB23	72	32.161
ENSTGUG00000001105	-	85	30.476	ENSTGUG00000009985	-	77	30.476
ENSTGUG00000001105	-	88	37.500	ENSTGUG00000003236	RAB5A	81	37.500
ENSTGUG00000001105	-	81	42.708	ENSTGUG00000009889	RAB12	66	42.708
ENSTGUG00000001105	-	73	37.791	ENSTGUG00000013171	-	90	36.872
ENSTGUG00000001105	-	77	34.066	ENSTGUG00000017468	-	72	34.066
ENSTGUG00000001105	-	94	39.640	ENSTGUG00000002328	RAB1A	89	40.284
ENSTGUG00000001105	-	95	32.599	ENSTGUG00000013470	RAB6A	90	32.877
ENSTGUG00000001105	-	80	40.741	ENSTGUG00000000084	-	74	40.741
ENSTGUG00000001105	-	81	34.197	ENSTGUG00000006516	RAB9B	83	34.197
ENSTGUG00000001105	-	83	40.816	ENSTGUG00000012941	RAB30	83	40.816
ENSTGUG00000001105	-	92	36.697	ENSTGUG00000003675	RAB25	79	38.579
ENSTGUG00000001105	-	89	36.190	ENSTGUG00000008195	RAB22A	93	36.019
ENSTGUG00000001105	-	74	36.364	ENSTGUG00000009776	-	85	36.364
ENSTGUG00000001105	-	94	33.766	ENSTGUG00000005228	RAB33A	72	37.931
ENSTGUG00000001105	-	94	37.500	ENSTGUG00000006657	RAB14	76	42.408
ENSTGUG00000001105	-	81	33.684	ENSTGUG00000003786	RAB17	77	33.684
ENSTGUG00000001105	-	80	35.751	ENSTGUG00000002436	RAB33B	73	35.751
ENSTGUG00000001105	-	83	39.796	ENSTGUG00000009279	RAB11A	78	39.796
ENSTGUG00000001105	-	84	38.916	ENSTGUG00000003680	-	86	38.916
ENSTGUG00000001105	-	88	43.128	ENSTGUG00000011182	RAB2A	87	42.326
ENSTGUG00000001105	-	85	41.791	ENSTGUG00000009359	RAB35	95	40.455
ENSTGUG00000001105	-	91	32.444	ENSTGUG00000016028	-	93	32.589

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000001105	-	100	85.356	ENSG00000099246	RAB18	91	95.455	Homo_sapiens
ENSTGUG00000001105	-	99	74.678	ENSAPOG00000019881	rab18b	94	75.342	Acanthochromis_polyacanthus
ENSTGUG00000001105	-	100	85.232	ENSAMEG00000015990	RAB18	94	86.036	Ailuropoda_melanoleuca
ENSTGUG00000001105	-	99	75.536	ENSACIG00000008102	rab18b	94	76.712	Amphilophus_citrinellus
ENSTGUG00000001105	-	99	74.249	ENSAOCG00000013479	rab18b	94	75.342	Amphiprion_ocellaris
ENSTGUG00000001105	-	99	73.820	ENSAPEG00000022923	rab18b	94	74.886	Amphiprion_percula
ENSTGUG00000001105	-	99	73.820	ENSATEG00000002952	rab18b	94	75.342	Anabas_testudineus
ENSTGUG00000001105	-	100	85.043	ENSANAG00000035856	RAB18	100	85.043	Aotus_nancymaae
ENSTGUG00000001105	-	99	74.678	ENSACLG00000015289	rab18b	94	75.799	Astatotilapia_calliptera
ENSTGUG00000001105	-	100	76.496	ENSAMXG00000042073	rab18b	94	78.082	Astyanax_mexicanus
ENSTGUG00000001105	-	100	82.479	ENSBTAG00000050873	-	93	83.105	Bos_taurus
ENSTGUG00000001105	-	100	84.615	ENSBTAG00000009871	RAB18	88	84.615	Bos_taurus
ENSTGUG00000001105	-	100	85.043	ENSCJAG00000045749	RAB18	100	85.043	Callithrix_jacchus
ENSTGUG00000001105	-	100	85.043	ENSCAFG00020003253	RAB18	100	85.043	Canis_lupus_dingo
ENSTGUG00000001105	-	100	84.615	ENSCHIG00000008749	RAB18	100	84.615	Capra_hircus
ENSTGUG00000001105	-	100	85.043	ENSTSYG00000013092	RAB18	100	85.043	Carlito_syrichta
ENSTGUG00000001105	-	100	84.615	ENSCPOG00000032827	RAB18	100	84.615	Cavia_porcellus
ENSTGUG00000001105	-	100	85.043	ENSCCAG00000006762	RAB18	100	85.043	Cebus_capucinus
ENSTGUG00000001105	-	100	85.043	ENSCATG00000009672	RAB18	100	85.043	Cercocebus_atys
ENSTGUG00000001105	-	100	85.043	ENSCSAG00000011749	RAB18	100	85.043	Chlorocebus_sabaeus
ENSTGUG00000001105	-	100	85.043	ENSCANG00000035397	RAB18	100	85.043	Colobus_angolensis_palliatus
ENSTGUG00000001105	-	100	84.615	ENSCGRG00001017519	Rab18	100	84.615	Cricetulus_griseus_chok1gshd
ENSTGUG00000001105	-	100	84.615	ENSCGRG00000017201	Rab18	100	84.615	Cricetulus_griseus_crigri
ENSTGUG00000001105	-	95	73.874	ENSCSEG00000016803	rab18b	98	74.429	Cynoglossus_semilaevis
ENSTGUG00000001105	-	100	77.350	ENSDARG00000098344	rab18b	93	79.358	Danio_rerio
ENSTGUG00000001105	-	60	77.857	ENSDNOG00000038845	-	75	77.857	Dasypus_novemcinctus
ENSTGUG00000001105	-	100	85.043	ENSDNOG00000047713	RAB18	100	85.043	Dasypus_novemcinctus
ENSTGUG00000001105	-	86	78.607	ENSDORG00000029360	-	83	78.607	Dipodomys_ordii
ENSTGUG00000001105	-	100	84.188	ENSDORG00000028596	-	93	84.932	Dipodomys_ordii
ENSTGUG00000001105	-	100	85.043	ENSEASG00005007164	RAB18	100	85.043	Equus_asinus_asinus
ENSTGUG00000001105	-	100	85.043	ENSECAG00000017521	RAB18	88	85.043	Equus_caballus
ENSTGUG00000001105	-	99	76.496	ENSELUG00000016450	rab18b	94	77.727	Esox_lucius
ENSTGUG00000001105	-	100	85.043	ENSFCAG00000027161	RAB18	100	85.043	Felis_catus
ENSTGUG00000001105	-	100	88.462	ENSFALG00000007160	RAB18	100	88.462	Ficedula_albicollis
ENSTGUG00000001105	-	99	74.678	ENSFHEG00000020035	rab18b	94	75.342	Fundulus_heteroclitus
ENSTGUG00000001105	-	99	69.528	ENSGMOG00000016608	rab18b	93	70.183	Gadus_morhua
ENSTGUG00000001105	-	100	86.752	ENSGALG00000007435	RAB18	100	86.752	Gallus_gallus
ENSTGUG00000001105	-	99	74.249	ENSGAFG00000008560	rab18b	94	74.886	Gambusia_affinis
ENSTGUG00000001105	-	99	73.820	ENSGACG00000016395	rab18b	94	74.429	Gasterosteus_aculeatus
ENSTGUG00000001105	-	100	85.043	ENSGGOG00000008086	RAB18	100	85.043	Gorilla_gorilla
ENSTGUG00000001105	-	99	74.678	ENSHBUG00000003696	rab18b	94	75.799	Haplochromis_burtoni
ENSTGUG00000001105	-	99	69.528	ENSHGLG00000007301	-	88	73.684	Heterocephalus_glaber_female
ENSTGUG00000001105	-	100	83.333	ENSHGLG00000004365	RAB18	93	84.475	Heterocephalus_glaber_female
ENSTGUG00000001105	-	100	83.333	ENSHGLG00100013089	-	93	84.475	Heterocephalus_glaber_male
ENSTGUG00000001105	-	99	69.528	ENSHGLG00100009117	-	88	73.684	Heterocephalus_glaber_male
ENSTGUG00000001105	-	99	74.678	ENSHCOG00000002217	rab18b	94	74.886	Hippocampus_comes
ENSTGUG00000001105	-	100	74.786	ENSIPUG00000010859	rab18b	93	76.606	Ictalurus_punctatus
ENSTGUG00000001105	-	100	84.615	ENSSTOG00000014560	-	100	84.615	Ictidomys_tridecemlineatus
ENSTGUG00000001105	-	99	75.107	ENSKMAG00000007364	rab18b	94	75.342	Kryptolebias_marmoratus
ENSTGUG00000001105	-	99	75.536	ENSLBEG00000019428	rab18b	94	75.799	Labrus_bergylta
ENSTGUG00000001105	-	100	70.085	ENSLACG00000011256	rab18b	92	72.685	Latimeria_chalumnae
ENSTGUG00000001105	-	100	85.043	ENSLAFG00000015582	RAB18	100	85.043	Loxodonta_africana
ENSTGUG00000001105	-	100	85.043	ENSMFAG00000006430	RAB18	100	85.043	Macaca_fascicularis
ENSTGUG00000001105	-	100	83.761	ENSMMUG00000046971	RAB18	69	85.388	Macaca_mulatta
ENSTGUG00000001105	-	100	85.043	ENSMNEG00000038180	RAB18	100	85.043	Macaca_nemestrina
ENSTGUG00000001105	-	100	85.043	ENSMLEG00000033595	RAB18	100	85.043	Mandrillus_leucophaeus
ENSTGUG00000001105	-	100	73.077	ENSMAMG00000018445	rab18b	94	75.342	Mastacembelus_armatus
ENSTGUG00000001105	-	99	74.678	ENSMZEG00005008244	rab18b	94	75.799	Maylandia_zebra
ENSTGUG00000001105	-	100	72.650	ENSMAUG00000020698	-	94	78.922	Mesocricetus_auratus
ENSTGUG00000001105	-	100	85.043	ENSMICG00000017280	RAB18	100	85.043	Microcebus_murinus
ENSTGUG00000001105	-	100	84.615	ENSMOCG00000013044	Rab18	100	84.615	Microtus_ochrogaster
ENSTGUG00000001105	-	91	64.889	ENSMMOG00000017849	rab18b	94	63.478	Mola_mola
ENSTGUG00000001105	-	100	73.504	ENSMODG00000024936	-	94	75.342	Monodelphis_domestica
ENSTGUG00000001105	-	100	83.761	ENSMODG00000008253	RAB18	94	84.475	Monodelphis_domestica
ENSTGUG00000001105	-	99	76.395	ENSMALG00000005069	rab18b	94	76.256	Monopterus_albus
ENSTGUG00000001105	-	100	84.615	MGP_CAROLIEiJ_G0021978	Rab18	100	84.615	Mus_caroli
ENSTGUG00000001105	-	100	84.615	ENSMUSG00000073639	Rab18	100	84.615	Mus_musculus
ENSTGUG00000001105	-	100	84.615	MGP_PahariEiJ_G0018716	Rab18	100	84.615	Mus_pahari
ENSTGUG00000001105	-	100	84.615	MGP_SPRETEiJ_G0022894	Rab18	100	84.615	Mus_spretus
ENSTGUG00000001105	-	100	85.043	ENSMPUG00000010592	RAB18	100	85.043	Mustela_putorius_furo
ENSTGUG00000001105	-	100	84.100	ENSMLUG00000027295	RAB18	94	85.268	Myotis_lucifugus
ENSTGUG00000001105	-	100	84.188	ENSNGAG00000001465	Rab18	93	84.932	Nannospalax_galili
ENSTGUG00000001105	-	99	74.249	ENSNBRG00000008137	rab18b	94	75.799	Neolamprologus_brichardi
ENSTGUG00000001105	-	100	85.043	ENSNLEG00000016970	RAB18	100	85.043	Nomascus_leucogenys
ENSTGUG00000001105	-	100	84.615	ENSODEG00000004150	-	100	84.615	Octodon_degus
ENSTGUG00000001105	-	99	74.249	ENSONIG00000018673	rab18b	94	75.799	Oreochromis_niloticus
ENSTGUG00000001105	-	91	85.981	ENSOANG00000021391	RAB18	93	84.932	Ornithorhynchus_anatinus
ENSTGUG00000001105	-	100	84.188	ENSOCUG00000022307	RAB18	93	85.388	Oryctolagus_cuniculus
ENSTGUG00000001105	-	99	73.820	ENSORLG00000009609	rab18b	94	74.429	Oryzias_latipes
ENSTGUG00000001105	-	99	73.820	ENSORLG00020011590	rab18b	94	74.429	Oryzias_latipes_hni
ENSTGUG00000001105	-	99	73.820	ENSORLG00015007182	rab18b	94	74.429	Oryzias_latipes_hsok
ENSTGUG00000001105	-	99	73.391	ENSOMEG00000007546	rab18b	94	73.973	Oryzias_melastigma
ENSTGUG00000001105	-	100	85.043	ENSOGAG00000028015	RAB18	100	85.043	Otolemur_garnettii
ENSTGUG00000001105	-	100	84.615	ENSOARG00000016208	RAB18	100	84.615	Ovis_aries
ENSTGUG00000001105	-	100	85.043	ENSPPAG00000041625	RAB18	100	85.043	Pan_paniscus
ENSTGUG00000001105	-	100	85.043	ENSPPRG00000010314	RAB18	100	85.043	Panthera_pardus
ENSTGUG00000001105	-	100	85.043	ENSPTIG00000011667	RAB18	100	85.043	Panthera_tigris_altaica
ENSTGUG00000001105	-	100	85.043	ENSPTRG00000002384	RAB18	100	85.043	Pan_troglodytes
ENSTGUG00000001105	-	100	85.043	ENSPANG00000023005	RAB18	100	85.043	Papio_anubis
ENSTGUG00000001105	-	98	75.000	ENSPMAG00000005322	rab18b	91	76.037	Petromyzon_marinus
ENSTGUG00000001105	-	100	83.761	ENSPCIG00000028705	-	83	84.475	Phascolarctos_cinereus
ENSTGUG00000001105	-	99	75.210	ENSPFOG00000013491	rab18b	95	76.339	Poecilia_formosa
ENSTGUG00000001105	-	99	74.249	ENSPLAG00000019136	rab18b	94	75.342	Poecilia_latipinna
ENSTGUG00000001105	-	99	74.249	ENSPMEG00000008223	rab18b	94	75.342	Poecilia_mexicana
ENSTGUG00000001105	-	100	85.043	ENSPPYG00000002172	RAB18	100	85.043	Pongo_abelii
ENSTGUG00000001105	-	100	85.043	ENSPCOG00000018906	RAB18	100	85.043	Propithecus_coquereli
ENSTGUG00000001105	-	99	74.678	ENSPNYG00000001751	rab18b	94	75.799	Pundamilia_nyererei
ENSTGUG00000001105	-	100	76.496	ENSPNAG00000002404	rab18b	94	77.626	Pygocentrus_nattereri
ENSTGUG00000001105	-	100	84.615	ENSRNOG00000018972	Rab18	100	84.615	Rattus_norvegicus
ENSTGUG00000001105	-	100	84.615	ENSRBIG00000035948	RAB18	100	84.615	Rhinopithecus_bieti
ENSTGUG00000001105	-	100	85.043	ENSRROG00000040563	RAB18	100	85.043	Rhinopithecus_roxellana
ENSTGUG00000001105	-	100	84.188	ENSSHAG00000007613	RAB18	100	84.188	Sarcophilus_harrisii
ENSTGUG00000001105	-	99	73.391	ENSSMAG00000011814	rab18b	94	74.429	Scophthalmus_maximus
ENSTGUG00000001105	-	99	74.678	ENSSDUG00000005960	rab18b	94	75.799	Seriola_dumerili
ENSTGUG00000001105	-	99	74.678	ENSSLDG00000006014	rab18b	94	75.799	Seriola_lalandi_dorsalis
ENSTGUG00000001105	-	99	74.249	ENSSPAG00000020875	rab18b	94	75.342	Stegastes_partitus
ENSTGUG00000001105	-	100	84.615	ENSSSCG00000028655	RAB18	100	84.615	Sus_scrofa
ENSTGUG00000001105	-	99	75.966	ENSTRUG00000004283	rab18b	94	74.886	Takifugu_rubripes
ENSTGUG00000001105	-	99	73.391	ENSTNIG00000007882	rab18b	93	73.516	Tetraodon_nigroviridis
ENSTGUG00000001105	-	100	85.043	ENSVVUG00000001705	RAB18	100	85.043	Vulpes_vulpes
ENSTGUG00000001105	-	99	74.678	ENSXMAG00000006945	rab18b	94	75.342	Xiphophorus_maculatus