EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000001119 (Gene tree)
Gene ID: 100231015
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 15004 bases
Position: chr13:7682679-7697682
Accession: 14099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000001158	Exo_endo_phos	PF03372.23	7.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000001170	CNOT6-201	1671	-	ENSTGUP00000001158	556 (aa)	-	H0YS98

Gene Model

Click here to download ENSTGUG00000001119's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000001119	CNOT6	100	78.237	ENSTGUG00000001737	-	99	78.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000001119	CNOT6	100	95.332	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSTGUG00000001119	CNOT6	100	87.657	ENSAPOG00000009994	cnot6b	100	87.299	Acanthochromis_polyacanthus
ENSTGUG00000001119	CNOT6	100	96.064	ENSAMEG00000000949	CNOT6	99	96.064	Ailuropoda_melanoleuca
ENSTGUG00000001119	CNOT6	100	86.583	ENSACIG00000016566	cnot6b	100	86.225	Amphilophus_citrinellus
ENSTGUG00000001119	CNOT6	100	87.657	ENSAOCG00000006893	cnot6b	100	87.299	Amphiprion_ocellaris
ENSTGUG00000001119	CNOT6	100	87.657	ENSAPEG00000016949	cnot6b	100	87.299	Amphiprion_percula
ENSTGUG00000001119	CNOT6	100	85.868	ENSATEG00000007862	cnot6b	100	85.510	Anabas_testudineus
ENSTGUG00000001119	CNOT6	100	99.282	ENSAPLG00000012715	CNOT6	99	99.282	Anas_platyrhynchos
ENSTGUG00000001119	CNOT6	100	95.332	ENSACAG00000016548	CNOT6	100	95.332	Anolis_carolinensis
ENSTGUG00000001119	CNOT6	100	95.691	ENSANAG00000030436	CNOT6	96	95.691	Aotus_nancymaae
ENSTGUG00000001119	CNOT6	100	85.510	ENSACLG00000008279	cnot6b	100	86.047	Astatotilapia_calliptera
ENSTGUG00000001119	CNOT6	100	87.814	ENSAMXG00000019140	cnot6a	100	87.814	Astyanax_mexicanus
ENSTGUG00000001119	CNOT6	100	86.022	ENSAMXG00000034694	cnot6b	100	86.022	Astyanax_mexicanus
ENSTGUG00000001119	CNOT6	100	95.871	ENSBTAG00000017362	CNOT6	100	95.871	Bos_taurus
ENSTGUG00000001119	CNOT6	100	95.512	ENSCJAG00000009795	CNOT6	100	95.512	Callithrix_jacchus
ENSTGUG00000001119	CNOT6	100	96.230	ENSCAFG00000000464	CNOT6	100	96.230	Canis_familiaris
ENSTGUG00000001119	CNOT6	100	96.230	ENSCAFG00020002441	CNOT6	100	96.230	Canis_lupus_dingo
ENSTGUG00000001119	CNOT6	100	95.691	ENSCHIG00000019100	CNOT6	100	95.691	Capra_hircus
ENSTGUG00000001119	CNOT6	100	94.614	ENSTSYG00000003982	CNOT6	100	94.614	Carlito_syrichta
ENSTGUG00000001119	CNOT6	100	90.844	ENSCPOG00000035657	CNOT6	100	90.844	Cavia_porcellus
ENSTGUG00000001119	CNOT6	100	91.023	ENSCCAG00000033670	CNOT6	100	91.023	Cebus_capucinus
ENSTGUG00000001119	CNOT6	100	95.332	ENSCATG00000042014	CNOT6	100	95.332	Cercocebus_atys
ENSTGUG00000001119	CNOT6	100	94.434	ENSCLAG00000010489	CNOT6	100	94.434	Chinchilla_lanigera
ENSTGUG00000001119	CNOT6	100	95.332	ENSCSAG00000008165	CNOT6	100	95.332	Chlorocebus_sabaeus
ENSTGUG00000001119	CNOT6	100	95.512	ENSCHOG00000009680	CNOT6	100	95.512	Choloepus_hoffmanni
ENSTGUG00000001119	CNOT6	100	98.025	ENSCPBG00000008908	CNOT6	100	98.025	Chrysemys_picta_bellii
ENSTGUG00000001119	CNOT6	100	95.512	ENSCANG00000026756	CNOT6	100	95.512	Colobus_angolensis_palliatus
ENSTGUG00000001119	CNOT6	100	93.896	ENSCGRG00001011452	Cnot6	100	93.896	Cricetulus_griseus_chok1gshd
ENSTGUG00000001119	CNOT6	100	92.280	ENSCGRG00000010407	Cnot6	100	92.280	Cricetulus_griseus_crigri
ENSTGUG00000001119	CNOT6	100	86.762	ENSCSEG00000010939	cnot6b	100	86.404	Cynoglossus_semilaevis
ENSTGUG00000001119	CNOT6	100	86.201	ENSCVAG00000010538	cnot6b	100	85.842	Cyprinodon_variegatus
ENSTGUG00000001119	CNOT6	100	87.097	ENSDARG00000008255	cnot6a	100	87.097	Danio_rerio
ENSTGUG00000001119	CNOT6	100	84.767	ENSDARG00000101072	cnot6b	100	84.767	Danio_rerio
ENSTGUG00000001119	CNOT6	100	96.230	ENSDNOG00000041644	CNOT6	100	96.230	Dasypus_novemcinctus
ENSTGUG00000001119	CNOT6	100	84.740	ENSDORG00000001708	Cnot6	100	84.740	Dipodomys_ordii
ENSTGUG00000001119	CNOT6	100	76.744	ENSETEG00000006975	CNOT6	100	76.744	Echinops_telfairi
ENSTGUG00000001119	CNOT6	100	95.332	ENSEASG00005012794	-	100	95.332	Equus_asinus_asinus
ENSTGUG00000001119	CNOT6	90	89.800	ENSEASG00005012957	-	99	89.800	Equus_asinus_asinus
ENSTGUG00000001119	CNOT6	100	89.408	ENSECAG00000012704	-	99	89.408	Equus_caballus
ENSTGUG00000001119	CNOT6	100	96.050	ENSECAG00000019325	CNOT6	100	96.050	Equus_caballus
ENSTGUG00000001119	CNOT6	100	94.794	ENSEEUG00000015382	CNOT6	100	94.794	Erinaceus_europaeus
ENSTGUG00000001119	CNOT6	100	83.774	ENSELUG00000015981	cnot6b	99	83.069	Esox_lucius
ENSTGUG00000001119	CNOT6	100	83.513	ENSELUG00000024580	cnot6a	100	83.513	Esox_lucius
ENSTGUG00000001119	CNOT6	100	96.230	ENSFCAG00000001881	CNOT6	100	96.230	Felis_catus
ENSTGUG00000001119	CNOT6	100	99.641	ENSFALG00000007699	CNOT6	100	99.641	Ficedula_albicollis
ENSTGUG00000001119	CNOT6	100	94.434	ENSFDAG00000001999	CNOT6	100	94.434	Fukomys_damarensis
ENSTGUG00000001119	CNOT6	65	90.476	ENSFHEG00000013756	cnot6b	96	90.476	Fundulus_heteroclitus
ENSTGUG00000001119	CNOT6	95	86.011	ENSGMOG00000009767	cnot6b	99	86.011	Gadus_morhua
ENSTGUG00000001119	CNOT6	100	99.461	ENSGALG00000034316	CNOT6	100	99.461	Gallus_gallus
ENSTGUG00000001119	CNOT6	100	86.380	ENSGAFG00000008525	cnot6b	100	86.022	Gambusia_affinis
ENSTGUG00000001119	CNOT6	95	84.121	ENSGACG00000018046	cnot6b	99	84.121	Gasterosteus_aculeatus
ENSTGUG00000001119	CNOT6	100	81.508	ENSGAGG00000012176	CNOT6	100	81.508	Gopherus_agassizii
ENSTGUG00000001119	CNOT6	100	95.332	ENSGGOG00000003675	CNOT6	100	95.332	Gorilla_gorilla
ENSTGUG00000001119	CNOT6	100	85.689	ENSHBUG00000002819	cnot6b	100	86.225	Haplochromis_burtoni
ENSTGUG00000001119	CNOT6	100	94.614	ENSHGLG00000017756	CNOT6	100	94.614	Heterocephalus_glaber_female
ENSTGUG00000001119	CNOT6	100	94.614	ENSHGLG00100005747	CNOT6	100	94.614	Heterocephalus_glaber_male
ENSTGUG00000001119	CNOT6	100	84.409	ENSHCOG00000016176	cnot6b	100	84.946	Hippocampus_comes
ENSTGUG00000001119	CNOT6	100	86.355	ENSIPUG00000019831	cnot6a	100	86.355	Ictalurus_punctatus
ENSTGUG00000001119	CNOT6	100	85.305	ENSIPUG00000017482	cnot6b	100	85.305	Ictalurus_punctatus
ENSTGUG00000001119	CNOT6	100	96.230	ENSSTOG00000002803	CNOT6	100	96.230	Ictidomys_tridecemlineatus
ENSTGUG00000001119	CNOT6	100	94.255	ENSJJAG00000012296	Cnot6	100	94.255	Jaculus_jaculus
ENSTGUG00000001119	CNOT6	100	86.918	ENSKMAG00000004640	cnot6b	100	86.559	Kryptolebias_marmoratus
ENSTGUG00000001119	CNOT6	100	84.615	ENSLBEG00000027917	cnot6b	100	85.152	Labrus_bergylta
ENSTGUG00000001119	CNOT6	100	91.219	ENSLOCG00000010102	cnot6b	99	91.219	Lepisosteus_oculatus
ENSTGUG00000001119	CNOT6	100	96.589	ENSLAFG00000016742	CNOT6	100	96.589	Loxodonta_africana
ENSTGUG00000001119	CNOT6	100	95.332	ENSMFAG00000030867	CNOT6	100	95.332	Macaca_fascicularis
ENSTGUG00000001119	CNOT6	100	95.332	ENSMMUG00000018690	CNOT6	100	95.332	Macaca_mulatta
ENSTGUG00000001119	CNOT6	100	95.332	ENSMNEG00000038565	CNOT6	100	95.332	Macaca_nemestrina
ENSTGUG00000001119	CNOT6	100	95.332	ENSMLEG00000010555	CNOT6	100	95.332	Mandrillus_leucophaeus
ENSTGUG00000001119	CNOT6	100	87.835	ENSMAMG00000007515	cnot6b	100	87.478	Mastacembelus_armatus
ENSTGUG00000001119	CNOT6	100	85.510	ENSMZEG00005012899	cnot6b	100	86.047	Maylandia_zebra
ENSTGUG00000001119	CNOT6	100	94.973	ENSMAUG00000019798	Cnot6	100	94.973	Mesocricetus_auratus
ENSTGUG00000001119	CNOT6	100	93.896	ENSMICG00000013018	-	100	93.896	Microcebus_murinus
ENSTGUG00000001119	CNOT6	98	85.294	ENSMICG00000028378	-	99	85.294	Microcebus_murinus
ENSTGUG00000001119	CNOT6	100	94.794	ENSMOCG00000021662	Cnot6	100	94.794	Microtus_ochrogaster
ENSTGUG00000001119	CNOT6	100	84.740	ENSMMOG00000003227	cnot6b	100	84.740	Mola_mola
ENSTGUG00000001119	CNOT6	100	96.948	ENSMODG00000003979	CNOT6	100	96.948	Monodelphis_domestica
ENSTGUG00000001119	CNOT6	100	87.478	ENSMALG00000014251	cnot6b	100	87.120	Monopterus_albus
ENSTGUG00000001119	CNOT6	100	94.973	MGP_CAROLIEiJ_G0016277	Cnot6	100	94.973	Mus_caroli
ENSTGUG00000001119	CNOT6	100	94.973	ENSMUSG00000020362	Cnot6	100	94.973	Mus_musculus
ENSTGUG00000001119	CNOT6	100	94.973	MGP_PahariEiJ_G0017413	Cnot6	100	94.973	Mus_pahari
ENSTGUG00000001119	CNOT6	100	94.794	MGP_SPRETEiJ_G0017122	Cnot6	100	94.794	Mus_spretus
ENSTGUG00000001119	CNOT6	100	96.230	ENSMPUG00000000587	CNOT6	96	96.230	Mustela_putorius_furo
ENSTGUG00000001119	CNOT6	100	94.128	ENSMLUG00000010257	CNOT6	100	94.128	Myotis_lucifugus
ENSTGUG00000001119	CNOT6	100	94.075	ENSNGAG00000008269	Cnot6	100	94.075	Nannospalax_galili
ENSTGUG00000001119	CNOT6	100	85.689	ENSNBRG00000010798	cnot6b	100	86.225	Neolamprologus_brichardi
ENSTGUG00000001119	CNOT6	100	94.075	ENSNLEG00000002322	CNOT6	100	94.075	Nomascus_leucogenys
ENSTGUG00000001119	CNOT6	81	96.729	ENSMEUG00000000025	CNOT6	81	96.729	Notamacropus_eugenii
ENSTGUG00000001119	CNOT6	88	94.749	ENSOPRG00000008244	-	88	94.749	Ochotona_princeps
ENSTGUG00000001119	CNOT6	100	93.537	ENSODEG00000007041	CNOT6	100	93.537	Octodon_degus
ENSTGUG00000001119	CNOT6	75	86.288	ENSONIG00000013027	cnot6b	99	86.288	Oreochromis_niloticus
ENSTGUG00000001119	CNOT6	100	95.332	ENSOANG00000010226	CNOT6	100	95.332	Ornithorhynchus_anatinus
ENSTGUG00000001119	CNOT6	100	95.170	ENSOCUG00000011083	CNOT6	100	95.170	Oryctolagus_cuniculus
ENSTGUG00000001119	CNOT6	100	86.047	ENSORLG00000005059	cnot6b	100	85.689	Oryzias_latipes
ENSTGUG00000001119	CNOT6	100	86.047	ENSORLG00020012784	cnot6b	100	85.689	Oryzias_latipes_hni
ENSTGUG00000001119	CNOT6	94	85.086	ENSORLG00015022658	cnot6b	98	84.704	Oryzias_latipes_hsok
ENSTGUG00000001119	CNOT6	100	86.225	ENSOMEG00000005295	cnot6b	100	85.868	Oryzias_melastigma
ENSTGUG00000001119	CNOT6	94	95.420	ENSOGAG00000032470	CNOT6	100	95.420	Otolemur_garnettii
ENSTGUG00000001119	CNOT6	97	95.572	ENSOARG00000001003	CNOT6	100	95.572	Ovis_aries
ENSTGUG00000001119	CNOT6	100	95.332	ENSPPAG00000032253	CNOT6	100	95.332	Pan_paniscus
ENSTGUG00000001119	CNOT6	100	96.050	ENSPPRG00000011912	CNOT6	100	96.050	Panthera_pardus
ENSTGUG00000001119	CNOT6	100	96.050	ENSPTIG00000016794	CNOT6	100	96.050	Panthera_tigris_altaica
ENSTGUG00000001119	CNOT6	100	95.332	ENSPTRG00000017636	CNOT6	100	95.332	Pan_troglodytes
ENSTGUG00000001119	CNOT6	100	95.332	ENSPANG00000016191	CNOT6	100	95.332	Papio_anubis
ENSTGUG00000001119	CNOT6	100	87.993	ENSPKIG00000021368	cnot6b	100	87.993	Paramormyrops_kingsleyae
ENSTGUG00000001119	CNOT6	98	98.346	ENSPSIG00000017307	CNOT6	100	98.346	Pelodiscus_sinensis
ENSTGUG00000001119	CNOT6	100	86.404	ENSPMGG00000011238	cnot6b	100	86.047	Periophthalmus_magnuspinnatus
ENSTGUG00000001119	CNOT6	100	93.716	ENSPEMG00000000627	Cnot6	100	93.716	Peromyscus_maniculatus_bairdii
ENSTGUG00000001119	CNOT6	100	96.948	ENSPCIG00000020319	CNOT6	99	96.948	Phascolarctos_cinereus
ENSTGUG00000001119	CNOT6	100	86.201	ENSPFOG00000006291	cnot6b	100	85.842	Poecilia_formosa
ENSTGUG00000001119	CNOT6	100	82.616	ENSPLAG00000008266	cnot6b	100	82.258	Poecilia_latipinna
ENSTGUG00000001119	CNOT6	100	86.380	ENSPMEG00000009091	cnot6b	100	86.022	Poecilia_mexicana
ENSTGUG00000001119	CNOT6	100	85.305	ENSPREG00000003713	cnot6b	100	84.946	Poecilia_reticulata
ENSTGUG00000001119	CNOT6	100	95.332	ENSPPYG00000016137	CNOT6	100	95.332	Pongo_abelii
ENSTGUG00000001119	CNOT6	71	93.985	ENSPCAG00000005599	-	71	93.985	Procavia_capensis
ENSTGUG00000001119	CNOT6	100	90.126	ENSPCOG00000017359	CNOT6	100	90.844	Propithecus_coquereli
ENSTGUG00000001119	CNOT6	100	91.382	ENSPVAG00000003069	CNOT6	100	91.382	Pteropus_vampyrus
ENSTGUG00000001119	CNOT6	100	85.331	ENSPNYG00000000321	cnot6b	100	85.868	Pundamilia_nyererei
ENSTGUG00000001119	CNOT6	100	87.455	ENSPNAG00000029586	cnot6a	100	87.455	Pygocentrus_nattereri
ENSTGUG00000001119	CNOT6	100	86.201	ENSPNAG00000028816	cnot6b	100	86.201	Pygocentrus_nattereri
ENSTGUG00000001119	CNOT6	100	93.896	ENSRNOG00000054891	Cnot6	100	93.896	Rattus_norvegicus
ENSTGUG00000001119	CNOT6	100	95.153	ENSRBIG00000004309	CNOT6	100	95.153	Rhinopithecus_bieti
ENSTGUG00000001119	CNOT6	100	95.153	ENSRROG00000035378	CNOT6	100	95.153	Rhinopithecus_roxellana
ENSTGUG00000001119	CNOT6	100	95.512	ENSSBOG00000030494	CNOT6	100	95.512	Saimiri_boliviensis_boliviensis
ENSTGUG00000001119	CNOT6	100	97.127	ENSSHAG00000017436	CNOT6	100	97.127	Sarcophilus_harrisii
ENSTGUG00000001119	CNOT6	100	87.276	ENSSFOG00015022383	cnot6a	96	87.276	Scleropages_formosus
ENSTGUG00000001119	CNOT6	100	89.606	ENSSFOG00015015133	CNOT6	100	89.606	Scleropages_formosus
ENSTGUG00000001119	CNOT6	100	85.510	ENSSMAG00000003084	cnot6b	100	85.152	Scophthalmus_maximus
ENSTGUG00000001119	CNOT6	100	87.299	ENSSDUG00000004151	cnot6b	100	86.941	Seriola_dumerili
ENSTGUG00000001119	CNOT6	100	86.404	ENSSLDG00000004448	cnot6b	100	86.941	Seriola_lalandi_dorsalis
ENSTGUG00000001119	CNOT6	64	77.095	ENSSARG00000012650	-	100	77.095	Sorex_araneus
ENSTGUG00000001119	CNOT6	100	98.025	ENSSPUG00000007893	CNOT6	100	98.025	Sphenodon_punctatus
ENSTGUG00000001119	CNOT6	100	87.478	ENSSPAG00000000149	cnot6b	100	87.120	Stegastes_partitus
ENSTGUG00000001119	CNOT6	100	95.691	ENSSSCG00000014009	CNOT6	100	95.691	Sus_scrofa
ENSTGUG00000001119	CNOT6	100	84.560	ENSTRUG00000002818	cnot6b	100	84.560	Takifugu_rubripes
ENSTGUG00000001119	CNOT6	100	84.919	ENSTNIG00000004443	cnot6b	99	84.919	Tetraodon_nigroviridis
ENSTGUG00000001119	CNOT6	87	66.324	ENSTBEG00000017094	-	100	66.324	Tupaia_belangeri
ENSTGUG00000001119	CNOT6	100	95.871	ENSTTRG00000009363	CNOT6	100	95.871	Tursiops_truncatus
ENSTGUG00000001119	CNOT6	77	95.804	ENSUAMG00000004579	CNOT6	88	95.804	Ursus_americanus
ENSTGUG00000001119	CNOT6	100	91.781	ENSUMAG00000024577	CNOT6	100	91.781	Ursus_maritimus
ENSTGUG00000001119	CNOT6	83	93.692	ENSVPAG00000003593	CNOT6	83	93.692	Vicugna_pacos
ENSTGUG00000001119	CNOT6	100	96.230	ENSVVUG00000026940	CNOT6	100	96.230	Vulpes_vulpes
ENSTGUG00000001119	CNOT6	100	82.975	ENSXCOG00000003360	cnot6b	100	82.616	Xiphophorus_couchianus
ENSTGUG00000001119	CNOT6	100	86.380	ENSXMAG00000008730	cnot6b	100	86.022	Xiphophorus_maculatus