EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTGUG00000001266 (Gene tree)
Gene ID
100228528
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Taeniopygia_guttata
Status
putative
Strand
Plus strand
Length
12276 bases
Position
chr23:3755982-3768257
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTGUP00000001312PABPPF00658.183.1e-3211
ENSTGUP00000001312RRM_5PF13893.63.8e-1012
ENSTGUP00000001312RRM_5PF13893.63.8e-1022
ENSTGUP00000001312RRM_1PF00076.221.4e-9114
ENSTGUP00000001312RRM_1PF00076.221.4e-9124
ENSTGUP00000001312RRM_1PF00076.221.4e-9134
ENSTGUP00000001312RRM_1PF00076.221.4e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTGUT00000001325PABPC4-2011983-ENSTGUP00000001312660 (aa)-H0YSQ1
Gene Model
Click here to download ENSTGUG00000001266's gene model file
Pathways
Pathway IDPathway NameSource
tgu03013RNA transportKEGG
tgu03015mRNA surveillance pathwayKEGG
tgu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001266's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTGUG00000001266PABPC49868.627ENSTGUG00000005114PABPC1L9968.627
ENSTGUG00000001266PABPC45531.818ENSTGUG00000011148TIAL18131.250
ENSTGUG00000001266PABPC45631.183ENSTGUG00000017307TIA17931.183
ENSTGUG00000001266PABPC45530.263ENSTGUG00000001349ELAVL28930.263
ENSTGUG00000001266PABPC45138.372ENSTGUG00000002136CELF25538.372
ENSTGUG00000001266PABPC49975.680ENSTGUG00000012067PABPC19875.684
ENSTGUG00000001266PABPC45030.986ENSTGUG00000016423-9330.986
ENSTGUG00000001266PABPC45534.211ENSTGUG00000000118ELAVL19534.211
ENSTGUG00000001266PABPC46033.333ENSTGUG00000009017RBM195533.333
ENSTGUG00000001266PABPC45039.535ENSTGUG00000010377CELF16338.636
ENSTGUG00000001266PABPC45734.940ENSTGUG00000008597ELAVL49034.940
ENSTGUG00000001266PABPC45540.984ENSTGUG00000004470SF3B47140.984
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTGUG00000001266PABPC410087.595ENSG00000090621PABPC410097.674Homo_sapiens
ENSTGUG00000001266PABPC49981.791ENSAPOG00000001161pabpc49981.654Acanthochromis_polyacanthus
ENSTGUG00000001266PABPC410087.595ENSAMEG00000011535-9987.595Ailuropoda_melanoleuca
ENSTGUG00000001266PABPC49950.613ENSAMEG00000015083-9949.770Ailuropoda_melanoleuca
ENSTGUG00000001266PABPC410082.105ENSACIG00000023343pabpc49981.805Amphilophus_citrinellus
ENSTGUG00000001266PABPC49981.942ENSAOCG00000021529pabpc49981.805Amphiprion_ocellaris
ENSTGUG00000001266PABPC49981.942ENSAPEG00000019196pabpc49981.805Amphiprion_percula
ENSTGUG00000001266PABPC49981.970ENSATEG00000007402pabpc49981.532Anabas_testudineus
ENSTGUG00000001266PABPC410092.284ENSAPLG00000009729-10092.284Anas_platyrhynchos
ENSTGUG00000001266PABPC49990.169ENSACAG00000002544PABPC410088.814Anolis_carolinensis
ENSTGUG00000001266PABPC410087.595ENSANAG00000025079PABPC49987.595Aotus_nancymaae
ENSTGUG00000001266PABPC410081.955ENSACLG00000019558pabpc49981.805Astatotilapia_calliptera
ENSTGUG00000001266PABPC410077.744ENSAMXG00000018779pabpc49977.895Astyanax_mexicanus
ENSTGUG00000001266PABPC410085.174ENSBTAG00000017125PABPC49985.325Bos_taurus
ENSTGUG00000001266PABPC45585.629ENSBTAG00000048536-9385.629Bos_taurus
ENSTGUG00000001266PABPC410087.595ENSCJAG00000002512-9987.595Callithrix_jacchus
ENSTGUG00000001266PABPC47378.226ENSCJAG00000045953-9578.226Callithrix_jacchus
ENSTGUG00000001266PABPC410086.687ENSCAFG00000003081PABPC49986.687Canis_familiaris
ENSTGUG00000001266PABPC410087.746ENSCAFG00020004161PABPC49987.746Canis_lupus_dingo
ENSTGUG00000001266PABPC410068.778ENSCHIG00000023385-9968.778Capra_hircus
ENSTGUG00000001266PABPC410087.746ENSCHIG00000019398-9987.746Capra_hircus
ENSTGUG00000001266PABPC410087.595ENSTSYG00000006532PABPC49987.595Carlito_syrichta
ENSTGUG00000001266PABPC49987.386ENSCAPG00000015984PABPC49987.386Cavia_aperea
ENSTGUG00000001266PABPC410087.595ENSCPOG00000009552PABPC49987.595Cavia_porcellus
ENSTGUG00000001266PABPC410087.443ENSCCAG00000037306PABPC49987.443Cebus_capucinus
ENSTGUG00000001266PABPC410087.595ENSCATG00000042164PABPC49987.595Cercocebus_atys
ENSTGUG00000001266PABPC410087.292ENSCLAG00000011899PABPC49987.292Chinchilla_lanigera
ENSTGUG00000001266PABPC410087.595ENSCSAG00000001135PABPC49987.595Chlorocebus_sabaeus
ENSTGUG00000001266PABPC48290.501ENSCHOG00000005327PABPC48190.501Choloepus_hoffmanni
ENSTGUG00000001266PABPC410092.738ENSCPBG00000001038PABPC410092.738Chrysemys_picta_bellii
ENSTGUG00000001266PABPC49987.423ENSCANG00000034177PABPC49987.423Colobus_angolensis_palliatus
ENSTGUG00000001266PABPC49986.677ENSCGRG00001018166Pabpc410085.586Cricetulus_griseus_chok1gshd
ENSTGUG00000001266PABPC49884.914ENSCGRG00000009777Pabpc410083.841Cricetulus_griseus_crigri
ENSTGUG00000001266PABPC49981.476ENSCSEG00000000130pabpc49981.627Cynoglossus_semilaevis
ENSTGUG00000001266PABPC49982.165ENSCVAG00000019246pabpc49981.887Cyprinodon_variegatus
ENSTGUG00000001266PABPC49983.384ENSDARG00000059259pabpc410083.255Danio_rerio
ENSTGUG00000001266PABPC49887.113ENSDNOG00000018444-9987.113Dasypus_novemcinctus
ENSTGUG00000001266PABPC410085.758ENSDORG00000011581Pabpc49985.758Dipodomys_ordii
ENSTGUG00000001266PABPC48756.672ENSETEG00000009172-9956.672Echinops_telfairi
ENSTGUG00000001266PABPC410095.312ENSETEG00000018453-8495.312Echinops_telfairi
ENSTGUG00000001266PABPC49774.615ENSEBUG00000013782pabpc49974.661Eptatretus_burgeri
ENSTGUG00000001266PABPC49974.052ENSEBUG00000000992pabpc49973.860Eptatretus_burgeri
ENSTGUG00000001266PABPC410087.746ENSEASG00005014119PABPC49987.746Equus_asinus_asinus
ENSTGUG00000001266PABPC410087.746ENSECAG00000009396PABPC49987.746Equus_caballus
ENSTGUG00000001266PABPC49885.978ENSEEUG00000002962PABPC49985.628Erinaceus_europaeus
ENSTGUG00000001266PABPC49982.326ENSELUG00000003195pabpc49981.737Esox_lucius
ENSTGUG00000001266PABPC410087.746ENSFCAG00000015254-9987.746Felis_catus
ENSTGUG00000001266PABPC410094.545ENSFALG00000000543PABPC410094.545Ficedula_albicollis
ENSTGUG00000001266PABPC49057.582ENSFDAG00000010581-10055.259Fukomys_damarensis
ENSTGUG00000001266PABPC410087.292ENSFDAG00000020016-9987.292Fukomys_damarensis
ENSTGUG00000001266PABPC410081.955ENSFHEG00000007548pabpc49981.682Fundulus_heteroclitus
ENSTGUG00000001266PABPC410081.231ENSGMOG00000019025pabpc49980.568Gadus_morhua
ENSTGUG00000001266PABPC410092.284ENSGALG00000003800PABPC410092.284Gallus_gallus
ENSTGUG00000001266PABPC49992.689ENSGAFG00000018195pabpc49897.778Gambusia_affinis
ENSTGUG00000001266PABPC49980.422ENSGACG00000007179pabpc49980.120Gasterosteus_aculeatus
ENSTGUG00000001266PABPC410092.436ENSGAGG00000001888PABPC410092.436Gopherus_agassizii
ENSTGUG00000001266PABPC410087.595ENSGGOG00000004002PABPC49987.595Gorilla_gorilla
ENSTGUG00000001266PABPC410081.805ENSHBUG00000020206pabpc49981.654Haplochromis_burtoni
ENSTGUG00000001266PABPC410087.443ENSHGLG00000011162PABPC49987.443Heterocephalus_glaber_female
ENSTGUG00000001266PABPC410086.384ENSHGLG00100001580PABPC49986.384Heterocephalus_glaber_male
ENSTGUG00000001266PABPC49981.777ENSHCOG00000012694pabpc49981.381Hippocampus_comes
ENSTGUG00000001266PABPC49881.957ENSIPUG00000016620pabpc49981.166Ictalurus_punctatus
ENSTGUG00000001266PABPC410085.758ENSSTOG00000010416PABPC49985.758Ictidomys_tridecemlineatus
ENSTGUG00000001266PABPC410084.091ENSJJAG00000007781Pabpc49984.091Jaculus_jaculus
ENSTGUG00000001266PABPC410081.381ENSKMAG00000013597pabpc49980.781Kryptolebias_marmoratus
ENSTGUG00000001266PABPC410080.960ENSLBEG00000013654pabpc49981.381Labrus_bergylta
ENSTGUG00000001266PABPC410087.820ENSLACG00000011907PABPC410087.820Latimeria_chalumnae
ENSTGUG00000001266PABPC410084.903ENSLOCG00000001877pabpc410084.604Lepisosteus_oculatus
ENSTGUG00000001266PABPC410087.746ENSLAFG00000000151PABPC49987.746Loxodonta_africana
ENSTGUG00000001266PABPC410087.595ENSMFAG00000041481PABPC49987.595Macaca_fascicularis
ENSTGUG00000001266PABPC410087.595ENSMMUG00000007497PABPC49987.595Macaca_mulatta
ENSTGUG00000001266PABPC410087.443ENSMNEG00000043054PABPC49987.443Macaca_nemestrina
ENSTGUG00000001266PABPC410087.595ENSMLEG00000040716PABPC49987.595Mandrillus_leucophaeus
ENSTGUG00000001266PABPC49981.942ENSMAMG00000010025pabpc49981.832Mastacembelus_armatus
ENSTGUG00000001266PABPC410081.654ENSMZEG00005006141pabpc49981.654Maylandia_zebra
ENSTGUG00000001266PABPC49992.965ENSMGAG00000005408PABPC410092.965Meleagris_gallopavo
ENSTGUG00000001266PABPC46982.692ENSMAUG00000001295-9782.692Mesocricetus_auratus
ENSTGUG00000001266PABPC47487.619ENSMAUG00000019763-8780.645Mesocricetus_auratus
ENSTGUG00000001266PABPC45583.234ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSTGUG00000001266PABPC49968.919ENSMICG00000036729-9969.426Microcebus_murinus
ENSTGUG00000001266PABPC48983.446ENSMICG00000016633-9788.511Microcebus_murinus
ENSTGUG00000001266PABPC49987.348ENSMOCG00000006763Pabpc49986.838Microtus_ochrogaster
ENSTGUG00000001266PABPC410078.030ENSMMOG00000002363pabpc49979.669Mola_mola
ENSTGUG00000001266PABPC410089.728ENSMODG00000017657-10089.728Monodelphis_domestica
ENSTGUG00000001266PABPC45772.800ENSMODG00000018051-9672.800Monodelphis_domestica
ENSTGUG00000001266PABPC49981.694ENSMALG00000011017pabpc49980.960Monopterus_albus
ENSTGUG00000001266PABPC49974.407MGP_CAROLIEiJ_G0024864-9974.407Mus_caroli
ENSTGUG00000001266PABPC410086.384MGP_CAROLIEiJ_G0026435-10097.872Mus_caroli
ENSTGUG00000001266PABPC410086.838ENSMUSG00000011257Pabpc410096.429Mus_musculus
ENSTGUG00000001266PABPC49986.810MGP_PahariEiJ_G0028765Pabpc410098.582Mus_pahari
ENSTGUG00000001266PABPC49970.588MGP_SPRETEiJ_G0027415Pabpc410097.872Mus_spretus
ENSTGUG00000001266PABPC49647.402ENSMPUG00000006836-10046.688Mustela_putorius_furo
ENSTGUG00000001266PABPC410087.746ENSMPUG00000014414-9987.746Mustela_putorius_furo
ENSTGUG00000001266PABPC410085.000ENSMLUG00000012068PABPC49983.788Myotis_lucifugus
ENSTGUG00000001266PABPC410085.758ENSNGAG00000018292Pabpc49985.758Nannospalax_galili
ENSTGUG00000001266PABPC46389.881ENSNBRG00000010047-7289.881Neolamprologus_brichardi
ENSTGUG00000001266PABPC45797.596ENSNBRG00000009708pabpc49897.596Neolamprologus_brichardi
ENSTGUG00000001266PABPC410086.536ENSNLEG00000011928PABPC49986.536Nomascus_leucogenys
ENSTGUG00000001266PABPC48192.063ENSOPRG00000011984PABPC48792.063Ochotona_princeps
ENSTGUG00000001266PABPC45084.286ENSODEG00000013457-10084.286Octodon_degus
ENSTGUG00000001266PABPC49977.664ENSODEG00000017434-9977.172Octodon_degus
ENSTGUG00000001266PABPC410087.141ENSODEG00000006592-9987.141Octodon_degus
ENSTGUG00000001266PABPC410081.654ENSONIG00000008176pabpc49981.353Oreochromis_niloticus
ENSTGUG00000001266PABPC410090.923ENSOANG00000010001PABPC410090.923Ornithorhynchus_anatinus
ENSTGUG00000001266PABPC49687.539ENSOCUG00000000562PABPC48887.539Oryctolagus_cuniculus
ENSTGUG00000001266PABPC49992.901ENSORLG00000017479pabpc49992.901Oryzias_latipes
ENSTGUG00000001266PABPC49992.901ENSORLG00020018644pabpc49992.901Oryzias_latipes_hni
ENSTGUG00000001266PABPC49992.901ENSORLG00015015042pabpc49992.901Oryzias_latipes_hsok
ENSTGUG00000001266PABPC49982.219ENSOMEG00000014410pabpc49981.832Oryzias_melastigma
ENSTGUG00000001266PABPC410085.347ENSOGAG00000004067PABPC49985.498Otolemur_garnettii
ENSTGUG00000001266PABPC410087.746ENSOARG00000020060PABPC49987.746Ovis_aries
ENSTGUG00000001266PABPC410087.595ENSPPAG00000043625PABPC49987.595Pan_paniscus
ENSTGUG00000001266PABPC410087.746ENSPPRG00000024727PABPC49987.746Panthera_pardus
ENSTGUG00000001266PABPC410087.746ENSPTIG00000005829PABPC49987.746Panthera_tigris_altaica
ENSTGUG00000001266PABPC410087.595ENSPTRG00000000573PABPC49987.595Pan_troglodytes
ENSTGUG00000001266PABPC410087.746ENSPANG00000009484PABPC49987.746Papio_anubis
ENSTGUG00000001266PABPC49983.910ENSPKIG00000025356pabpc49983.333Paramormyrops_kingsleyae
ENSTGUG00000001266PABPC410092.890ENSPSIG00000016892PABPC410092.890Pelodiscus_sinensis
ENSTGUG00000001266PABPC49980.030ENSPMGG00000009073pabpc49978.228Periophthalmus_magnuspinnatus
ENSTGUG00000001266PABPC410086.233ENSPEMG00000023569-9986.233Peromyscus_maniculatus_bairdii
ENSTGUG00000001266PABPC49981.611ENSPEMG00000024193-9981.611Peromyscus_maniculatus_bairdii
ENSTGUG00000001266PABPC48971.382ENSPMAG00000002836pabpc410072.039Petromyzon_marinus
ENSTGUG00000001266PABPC49768.786ENSPMAG00000007885pabpc49967.978Petromyzon_marinus
ENSTGUG00000001266PABPC49996.420ENSPCIG00000020674PABPC410096.420Phascolarctos_cinereus
ENSTGUG00000001266PABPC410081.053ENSPFOG00000002682pabpc49981.381Poecilia_formosa
ENSTGUG00000001266PABPC410081.203ENSPLAG00000010112pabpc49981.532Poecilia_latipinna
ENSTGUG00000001266PABPC49981.639ENSPMEG00000019739pabpc49981.381Poecilia_mexicana
ENSTGUG00000001266PABPC410081.955ENSPREG00000001589pabpc49981.682Poecilia_reticulata
ENSTGUG00000001266PABPC410087.595ENSPPYG00000001506PABPC49987.595Pongo_abelii
ENSTGUG00000001266PABPC410083.056ENSPCAG00000003341PABPC49983.056Procavia_capensis
ENSTGUG00000001266PABPC410086.858ENSPCOG00000023725-9987.009Propithecus_coquereli
ENSTGUG00000001266PABPC49970.508ENSPCOG00000025882-9970.508Propithecus_coquereli
ENSTGUG00000001266PABPC49986.913ENSPVAG00000002187PABPC49986.913Pteropus_vampyrus
ENSTGUG00000001266PABPC410081.955ENSPNYG00000006134pabpc49981.805Pundamilia_nyererei
ENSTGUG00000001266PABPC410081.940ENSPNAG00000024355pabpc410081.642Pygocentrus_nattereri
ENSTGUG00000001266PABPC410085.152ENSRNOG00000015642Pabpc49985.152Rattus_norvegicus
ENSTGUG00000001266PABPC410083.333ENSRNOG00000028592AABR07035074.19983.333Rattus_norvegicus
ENSTGUG00000001266PABPC410087.595ENSRBIG00000039761PABPC49987.595Rhinopithecus_bieti
ENSTGUG00000001266PABPC410087.595ENSRROG00000033355PABPC49987.595Rhinopithecus_roxellana
ENSTGUG00000001266PABPC410087.595ENSSBOG00000026193PABPC49987.595Saimiri_boliviensis_boliviensis
ENSTGUG00000001266PABPC410088.805ENSSHAG00000018139PABPC410088.805Sarcophilus_harrisii
ENSTGUG00000001266PABPC49983.881ENSSFOG00015023514pabpc49982.473Scleropages_formosus
ENSTGUG00000001266PABPC49982.024ENSSMAG00000009007pabpc49981.722Scophthalmus_maximus
ENSTGUG00000001266PABPC49990.575ENSSDUG00000012683pabpc49490.575Seriola_dumerili
ENSTGUG00000001266PABPC49988.027ENSSLDG00000013025pabpc49688.027Seriola_lalandi_dorsalis
ENSTGUG00000001266PABPC410080.938ENSSARG00000000310PABPC49980.938Sorex_araneus
ENSTGUG00000001266PABPC410092.436ENSSPUG00000003204PABPC410092.030Sphenodon_punctatus
ENSTGUG00000001266PABPC49993.034ENSSPAG00000009252pabpc49792.825Stegastes_partitus
ENSTGUG00000001266PABPC410087.746ENSSSCG00000003660-9987.746Sus_scrofa
ENSTGUG00000001266PABPC48944.444ENSSSCG00000036170-9544.781Sus_scrofa
ENSTGUG00000001266PABPC49982.353ENSTRUG00000005907pabpc49981.722Takifugu_rubripes
ENSTGUG00000001266PABPC49977.964ENSTNIG00000016902pabpc49977.204Tetraodon_nigroviridis
ENSTGUG00000001266PABPC49977.181ENSTBEG00000009035PABPC49977.181Tupaia_belangeri
ENSTGUG00000001266PABPC49967.496ENSTTRG00000014340PABPC49976.007Tursiops_truncatus
ENSTGUG00000001266PABPC410087.746ENSUAMG00000000303PABPC49987.746Ursus_americanus
ENSTGUG00000001266PABPC410090.541ENSUMAG00000019585PABPC49991.262Ursus_maritimus
ENSTGUG00000001266PABPC48071.386ENSVPAG00000010041PABPC47371.386Vicugna_pacos
ENSTGUG00000001266PABPC410087.746ENSVVUG00000005215PABPC49987.746Vulpes_vulpes
ENSTGUG00000001266PABPC410083.182ENSXETG00000010946pabpc410083.182Xenopus_tropicalis
ENSTGUG00000001266PABPC45598.810ENSXETG00000027221-10098.810Xenopus_tropicalis
ENSTGUG00000001266PABPC49991.169ENSXCOG00000013190pabpc49691.509Xiphophorus_couchianus
ENSTGUG00000001266PABPC410081.805ENSXMAG00000019007pabpc49981.532Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us