EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000001366 (Gene tree)
Gene ID: 100227716
Gene Symbol: RPP38
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 837 bases
Position: chr2:22824087-22824923
Accession: 30329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000001408	Ribosomal_L7Ae	PF01248.26	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000001421	RPP38-201	837	-	ENSTGUP00000001408	279 (aa)	-	H0YSZ7

Gene Model

Click here to download ENSTGUG00000001366's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG
tgu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001366's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000001366	RPP38	97	50.355	ENSG00000152464	RPP38	95	52.500	Homo_sapiens
ENSTGUG00000001366	RPP38	90	44.358	ENSAPOG00000001240	rpp38	90	44.141	Acanthochromis_polyacanthus
ENSTGUG00000001366	RPP38	97	51.825	ENSAMEG00000018832	RPP38	91	50.763	Ailuropoda_melanoleuca
ENSTGUG00000001366	RPP38	93	42.909	ENSACIG00000011592	rpp38	95	43.590	Amphilophus_citrinellus
ENSTGUG00000001366	RPP38	90	41.418	ENSAOCG00000017293	rpp38	90	41.199	Amphiprion_ocellaris
ENSTGUG00000001366	RPP38	90	44.531	ENSAPEG00000002315	rpp38	90	44.314	Amphiprion_percula
ENSTGUG00000001366	RPP38	91	42.751	ENSATEG00000000731	rpp38	91	42.481	Anabas_testudineus
ENSTGUG00000001366	RPP38	100	79.643	ENSAPLG00000002054	RPP38	99	79.643	Anas_platyrhynchos
ENSTGUG00000001366	RPP38	90	41.985	ENSACLG00000016958	rpp38	90	43.462	Astatotilapia_calliptera
ENSTGUG00000001366	RPP38	90	41.985	ENSACLG00000016962	rpp38	90	43.462	Astatotilapia_calliptera
ENSTGUG00000001366	RPP38	89	40.400	ENSAMXG00000025023	rpp38	88	40.157	Astyanax_mexicanus
ENSTGUG00000001366	RPP38	98	50.542	ENSBTAG00000007702	RPP38	91	50.570	Bos_taurus
ENSTGUG00000001366	RPP38	97	52.190	ENSCAFG00000024373	RPP38	91	51.527	Canis_familiaris
ENSTGUG00000001366	RPP38	97	52.190	ENSCAFG00020008008	RPP38	91	51.527	Canis_lupus_dingo
ENSTGUG00000001366	RPP38	98	50.181	ENSCHIG00000012484	RPP38	91	50.190	Capra_hircus
ENSTGUG00000001366	RPP38	97	51.087	ENSCPOG00000003981	RPP38	92	50.000	Cavia_porcellus
ENSTGUG00000001366	RPP38	97	53.818	ENSCLAG00000010194	RPP38	92	52.852	Chinchilla_lanigera
ENSTGUG00000001366	RPP38	92	50.936	ENSCSAG00000019055	RPP38	91	51.301	Chlorocebus_sabaeus
ENSTGUG00000001366	RPP38	97	53.818	ENSCHOG00000004335	RPP38	92	53.232	Choloepus_hoffmanni
ENSTGUG00000001366	RPP38	96	50.554	ENSCGRG00001001395	Rpp38	91	50.965	Cricetulus_griseus_chok1gshd
ENSTGUG00000001366	RPP38	96	50.554	ENSCGRG00000017441	Rpp38	91	50.965	Cricetulus_griseus_crigri
ENSTGUG00000001366	RPP38	92	44.151	ENSCSEG00000001721	rpp38	93	43.561	Cynoglossus_semilaevis
ENSTGUG00000001366	RPP38	90	41.379	ENSCVAG00000001676	rpp38	90	41.923	Cyprinodon_variegatus
ENSTGUG00000001366	RPP38	90	44.061	ENSDARG00000040350	rpp38	92	42.751	Danio_rerio
ENSTGUG00000001366	RPP38	97	53.650	ENSDNOG00000040314	RPP38	91	53.053	Dasypus_novemcinctus
ENSTGUG00000001366	RPP38	96	53.137	ENSDORG00000009783	Rpp38	91	52.510	Dipodomys_ordii
ENSTGUG00000001366	RPP38	96	51.852	ENSETEG00000002839	RPP38	91	51.163	Echinops_telfairi
ENSTGUG00000001366	RPP38	97	51.071	ENSEASG00005019783	RPP38	90	50.187	Equus_asinus_asinus
ENSTGUG00000001366	RPP38	98	50.360	ENSEEUG00000014677	RPP38	91	50.758	Erinaceus_europaeus
ENSTGUG00000001366	RPP38	91	43.816	ENSELUG00000010160	rpp38	92	43.416	Esox_lucius
ENSTGUG00000001366	RPP38	97	52.555	ENSFCAG00000022449	RPP38	91	51.527	Felis_catus
ENSTGUG00000001366	RPP38	100	92.473	ENSFALG00000014804	RPP38	97	92.473	Ficedula_albicollis
ENSTGUG00000001366	RPP38	97	53.455	ENSFDAG00000018669	RPP38	92	50.951	Fukomys_damarensis
ENSTGUG00000001366	RPP38	90	43.657	ENSFHEG00000013741	rpp38	90	43.866	Fundulus_heteroclitus
ENSTGUG00000001366	RPP38	100	77.143	ENSGALG00000008794	RPP38	95	77.143	Gallus_gallus
ENSTGUG00000001366	RPP38	53	48.052	ENSGACG00000009258	rpp38	91	48.052	Gasterosteus_aculeatus
ENSTGUG00000001366	RPP38	90	42.366	ENSHBUG00000010937	rpp38	90	43.846	Haplochromis_burtoni
ENSTGUG00000001366	RPP38	97	53.091	ENSHGLG00000012144	RPP38	92	52.091	Heterocephalus_glaber_female
ENSTGUG00000001366	RPP38	89	39.600	ENSIPUG00000022879	rpp38	92	40.996	Ictalurus_punctatus
ENSTGUG00000001366	RPP38	96	51.648	ENSSTOG00000025699	RPP38	89	51.341	Ictidomys_tridecemlineatus
ENSTGUG00000001366	RPP38	96	53.676	ENSJJAG00000007523	Rpp38	91	53.077	Jaculus_jaculus
ENSTGUG00000001366	RPP38	90	42.636	ENSKMAG00000003986	rpp38	89	41.923	Kryptolebias_marmoratus
ENSTGUG00000001366	RPP38	90	42.279	ENSLBEG00000006853	rpp38	89	43.233	Labrus_bergylta
ENSTGUG00000001366	RPP38	94	45.818	ENSLACG00000006502	RPP38	92	45.620	Latimeria_chalumnae
ENSTGUG00000001366	RPP38	95	44.928	ENSLOCG00000018347	rpp38	90	43.985	Lepisosteus_oculatus
ENSTGUG00000001366	RPP38	98	50.362	ENSLAFG00000000509	RPP38	93	49.242	Loxodonta_africana
ENSTGUG00000001366	RPP38	92	49.615	ENSMMUG00000007679	RPP38	91	50.000	Macaca_mulatta
ENSTGUG00000001366	RPP38	92	43.295	ENSMAMG00000012774	rpp38	90	43.137	Mastacembelus_armatus
ENSTGUG00000001366	RPP38	90	42.366	ENSMZEG00005003189	rpp38	90	43.846	Maylandia_zebra
ENSTGUG00000001366	RPP38	90	41.985	ENSMZEG00005003200	rpp38	90	43.462	Maylandia_zebra
ENSTGUG00000001366	RPP38	100	77.857	ENSMGAG00000008217	RPP38	95	77.857	Meleagris_gallopavo
ENSTGUG00000001366	RPP38	96	48.708	ENSMAUG00000003644	Rpp38	91	49.421	Mesocricetus_auratus
ENSTGUG00000001366	RPP38	96	50.368	ENSMOCG00000007020	Rpp38	91	49.231	Microtus_ochrogaster
ENSTGUG00000001366	RPP38	90	40.927	ENSMMOG00000003446	rpp38	88	41.085	Mola_mola
ENSTGUG00000001366	RPP38	94	57.252	ENSMODG00000024091	RPP38	92	56.923	Monodelphis_domestica
ENSTGUG00000001366	RPP38	90	43.015	ENSMALG00000002356	rpp38	89	42.481	Monopterus_albus
ENSTGUG00000001366	RPP38	96	50.368	MGP_CAROLIEiJ_G0023133	Rpp38	91	50.385	Mus_caroli
ENSTGUG00000001366	RPP38	96	50.741	ENSMUSG00000049950	Rpp38	91	50.775	Mus_musculus
ENSTGUG00000001366	RPP38	96	49.814	MGP_PahariEiJ_G0019193	Rpp38	91	49.027	Mus_pahari
ENSTGUG00000001366	RPP38	96	49.442	MGP_SPRETEiJ_G0024051	Rpp38	91	50.385	Mus_spretus
ENSTGUG00000001366	RPP38	97	54.745	ENSMPUG00000018523	RPP38	92	53.817	Mustela_putorius_furo
ENSTGUG00000001366	RPP38	92	50.769	ENSMLUG00000002153	RPP38	91	51.145	Myotis_lucifugus
ENSTGUG00000001366	RPP38	96	51.282	ENSNGAG00000011066	Rpp38	91	50.958	Nannospalax_galili
ENSTGUG00000001366	RPP38	90	42.857	ENSNBRG00000006994	rpp38	91	44.141	Neolamprologus_brichardi
ENSTGUG00000001366	RPP38	90	42.969	ENSONIG00000020467	rpp38	89	44.922	Oreochromis_niloticus
ENSTGUG00000001366	RPP38	91	51.923	ENSOCUG00000022768	-	91	51.908	Oryctolagus_cuniculus
ENSTGUG00000001366	RPP38	91	51.550	ENSOCUG00000024367	-	91	51.538	Oryctolagus_cuniculus
ENSTGUG00000001366	RPP38	91	43.284	ENSORLG00000009219	rpp38	91	45.174	Oryzias_latipes
ENSTGUG00000001366	RPP38	91	42.857	ENSORLG00020011503	rpp38	86	44.747	Oryzias_latipes_hni
ENSTGUG00000001366	RPP38	91	43.411	ENSORLG00015017702	rpp38	86	44.318	Oryzias_latipes_hsok
ENSTGUG00000001366	RPP38	89	42.586	ENSOMEG00000005414	rpp38	90	44.231	Oryzias_melastigma
ENSTGUG00000001366	RPP38	97	52.313	ENSOGAG00000008059	RPP38	91	51.673	Otolemur_garnettii
ENSTGUG00000001366	RPP38	98	48.746	ENSOARG00000004534	RPP38	91	50.000	Ovis_aries
ENSTGUG00000001366	RPP38	97	51.064	ENSPPAG00000041577	RPP38	83	50.000	Pan_paniscus
ENSTGUG00000001366	RPP38	97	53.285	ENSPPRG00000015329	RPP38	91	52.290	Panthera_pardus
ENSTGUG00000001366	RPP38	97	52.555	ENSPTIG00000007188	RPP38	91	51.527	Panthera_tigris_altaica
ENSTGUG00000001366	RPP38	97	51.064	ENSPTRG00000002318	RPP38	83	50.000	Pan_troglodytes
ENSTGUG00000001366	RPP38	95	38.929	ENSPKIG00000025652	rpp38	89	39.179	Paramormyrops_kingsleyae
ENSTGUG00000001366	RPP38	99	61.649	ENSPSIG00000001527	RPP38	95	61.567	Pelodiscus_sinensis
ENSTGUG00000001366	RPP38	96	52.768	ENSPEMG00000008375	Rpp38	91	51.737	Peromyscus_maniculatus_bairdii
ENSTGUG00000001366	RPP38	97	55.515	ENSPCIG00000009096	RPP38	87	55.000	Phascolarctos_cinereus
ENSTGUG00000001366	RPP38	75	47.248	ENSPFOG00000016823	rpp38	94	48.780	Poecilia_formosa
ENSTGUG00000001366	RPP38	93	44.364	ENSPLAG00000007626	rpp38	89	44.444	Poecilia_latipinna
ENSTGUG00000001366	RPP38	89	41.313	ENSPMEG00000020392	rpp38	88	40.856	Poecilia_mexicana
ENSTGUG00000001366	RPP38	93	44.403	ENSPREG00000017744	rpp38	91	44.706	Poecilia_reticulata
ENSTGUG00000001366	RPP38	97	50.000	ENSPPYG00000002113	RPP38	92	49.259	Pongo_abelii
ENSTGUG00000001366	RPP38	92	52.107	ENSPVAG00000007155	RPP38	91	52.471	Pteropus_vampyrus
ENSTGUG00000001366	RPP38	90	42.366	ENSPNYG00000004293	rpp38	90	43.846	Pundamilia_nyererei
ENSTGUG00000001366	RPP38	89	39.200	ENSPNAG00000010633	rpp38	89	38.976	Pygocentrus_nattereri
ENSTGUG00000001366	RPP38	96	50.741	ENSRNOG00000038025	Rpp38	91	50.193	Rattus_norvegicus
ENSTGUG00000001366	RPP38	97	56.985	ENSSHAG00000015529	RPP38	92	56.154	Sarcophilus_harrisii
ENSTGUG00000001366	RPP38	90	44.061	ENSSMAG00000018276	rpp38	88	44.314	Scophthalmus_maximus
ENSTGUG00000001366	RPP38	89	41.176	ENSSDUG00000001651	rpp38	89	42.745	Seriola_dumerili
ENSTGUG00000001366	RPP38	89	43.580	ENSSLDG00000014355	rpp38	89	43.529	Seriola_lalandi_dorsalis
ENSTGUG00000001366	RPP38	97	42.435	ENSSARG00000012099	RPP38	89	40.856	Sorex_araneus
ENSTGUG00000001366	RPP38	95	53.759	ENSSPUG00000008560	-	91	52.756	Sphenodon_punctatus
ENSTGUG00000001366	RPP38	99	56.727	ENSSPUG00000005237	-	94	56.391	Sphenodon_punctatus
ENSTGUG00000001366	RPP38	99	57.455	ENSSPUG00000018363	-	94	57.143	Sphenodon_punctatus
ENSTGUG00000001366	RPP38	90	44.444	ENSSPAG00000020387	rpp38	89	45.000	Stegastes_partitus
ENSTGUG00000001366	RPP38	98	48.929	ENSSSCG00000027110	RPP38	92	47.744	Sus_scrofa
ENSTGUG00000001366	RPP38	88	42.353	ENSTNIG00000001334	rpp38	89	42.353	Tetraodon_nigroviridis
ENSTGUG00000001366	RPP38	98	51.986	ENSTTRG00000004420	RPP38	91	50.951	Tursiops_truncatus
ENSTGUG00000001366	RPP38	97	51.825	ENSUAMG00000002618	RPP38	91	51.145	Ursus_americanus
ENSTGUG00000001366	RPP38	97	50.725	ENSUMAG00000012382	RPP38	92	51.136	Ursus_maritimus
ENSTGUG00000001366	RPP38	97	52.190	ENSVVUG00000005272	RPP38	91	51.145	Vulpes_vulpes
ENSTGUG00000001366	RPP38	93	45.756	ENSXETG00000003419	rpp38	93	45.353	Xenopus_tropicalis