EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000001472 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 29084 bases
Position: chrZ:31617987-31647070
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000001526	MIF4G_like	PF09088.11	9.9e-37	1	1
ENSTGUP00000001526	MIF4G_like_2	PF09090.11	9.2e-86	1	1
ENSTGUP00000001526	MIF4G	PF02854.19	6.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000001539	NCBP1-201	2382	-	ENSTGUP00000001526	793 (aa)	-	H0YTB3

Gene Model

Click here to download ENSTGUG00000001472's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03013	RNA transport	KEGG
tgu03015	mRNA surveillance pathway	KEGG
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000001472	NCBP1	100	84.025	ENSG00000136937	NCBP1	100	83.899	Homo_sapiens
ENSTGUG00000001472	NCBP1	99	80.252	ENSAPOG00000008002	NCBP1	99	79.219	Acanthochromis_polyacanthus
ENSTGUG00000001472	NCBP1	100	83.814	ENSAMEG00000004763	NCBP1	100	83.689	Ailuropoda_melanoleuca
ENSTGUG00000001472	NCBP1	99	79.975	ENSACIG00000000274	NCBP1	99	79.245	Amphilophus_citrinellus
ENSTGUG00000001472	NCBP1	99	80.377	ENSAOCG00000021148	NCBP1	99	79.345	Amphiprion_ocellaris
ENSTGUG00000001472	NCBP1	99	80.377	ENSAPEG00000001701	NCBP1	99	79.345	Amphiprion_percula
ENSTGUG00000001472	NCBP1	99	79.874	ENSATEG00000006929	NCBP1	99	78.841	Anabas_testudineus
ENSTGUG00000001472	NCBP1	95	91.853	ENSAPLG00000016318	NCBP1	100	91.459	Anas_platyrhynchos
ENSTGUG00000001472	NCBP1	100	87.016	ENSACAG00000004409	NCBP1	87	87.141	Anolis_carolinensis
ENSTGUG00000001472	NCBP1	100	82.138	ENSANAG00000025744	NCBP1	99	83.609	Aotus_nancymaae
ENSTGUG00000001472	NCBP1	99	79.748	ENSACLG00000014812	NCBP1	99	78.715	Astatotilapia_calliptera
ENSTGUG00000001472	NCBP1	99	78.894	ENSAMXG00000016364	NCBP1	99	78.894	Astyanax_mexicanus
ENSTGUG00000001472	NCBP1	100	83.774	ENSBTAG00000009732	NCBP1	100	83.648	Bos_taurus
ENSTGUG00000001472	NCBP1	99	32.555	WBGene00018156	ncbp-1	99	32.472	Caenorhabditis_elegans
ENSTGUG00000001472	NCBP1	100	84.151	ENSCJAG00000010840	NCBP1	100	89.135	Callithrix_jacchus
ENSTGUG00000001472	NCBP1	100	84.025	ENSCAFG00000002445	NCBP1	100	83.899	Canis_familiaris
ENSTGUG00000001472	NCBP1	98	84.163	ENSCAFG00020017997	NCBP1	100	83.576	Canis_lupus_dingo
ENSTGUG00000001472	NCBP1	100	83.522	ENSCHIG00000020139	NCBP1	100	83.396	Capra_hircus
ENSTGUG00000001472	NCBP1	51	79.462	ENSTSYG00000011914	NCBP1	99	77.329	Carlito_syrichta
ENSTGUG00000001472	NCBP1	81	74.109	ENSCAPG00000014252	NCBP1	90	73.953	Cavia_aperea
ENSTGUG00000001472	NCBP1	95	83.905	ENSCPOG00000012573	NCBP1	99	83.773	Cavia_porcellus
ENSTGUG00000001472	NCBP1	100	84.025	ENSCCAG00000032297	NCBP1	100	83.899	Cebus_capucinus
ENSTGUG00000001472	NCBP1	100	84.025	ENSCATG00000010052	NCBP1	100	83.899	Cercocebus_atys
ENSTGUG00000001472	NCBP1	100	84.151	ENSCLAG00000014339	NCBP1	100	84.025	Chinchilla_lanigera
ENSTGUG00000001472	NCBP1	100	84.025	ENSCSAG00000010929	NCBP1	100	83.899	Chlorocebus_sabaeus
ENSTGUG00000001472	NCBP1	89	88.785	ENSCHOG00000010332	NCBP1	90	89.524	Choloepus_hoffmanni
ENSTGUG00000001472	NCBP1	100	85.660	ENSCPBG00000024344	NCBP1	99	89.394	Chrysemys_picta_bellii
ENSTGUG00000001472	NCBP1	99	51.134	ENSCING00000008990	-	99	50.756	Ciona_intestinalis
ENSTGUG00000001472	NCBP1	99	50.000	ENSCSAVG00000005300	-	99	52.577	Ciona_savignyi
ENSTGUG00000001472	NCBP1	100	84.025	ENSCANG00000036913	NCBP1	100	83.899	Colobus_angolensis_palliatus
ENSTGUG00000001472	NCBP1	100	83.396	ENSCGRG00001015771	Ncbp1	100	83.270	Cricetulus_griseus_chok1gshd
ENSTGUG00000001472	NCBP1	99	83.567	ENSCGRG00000010311	Ncbp1	100	83.439	Cricetulus_griseus_crigri
ENSTGUG00000001472	NCBP1	99	79.623	ENSCSEG00000012377	NCBP1	99	78.715	Cynoglossus_semilaevis
ENSTGUG00000001472	NCBP1	99	77.736	ENSCVAG00000008795	NCBP1	99	78.239	Cyprinodon_variegatus
ENSTGUG00000001472	NCBP1	100	83.396	ENSDNOG00000006885	NCBP1	97	87.135	Dasypus_novemcinctus
ENSTGUG00000001472	NCBP1	100	79.599	ENSDORG00000013652	Ncbp1	100	79.474	Dipodomys_ordii
ENSTGUG00000001472	NCBP1	100	53.704	FBgn0022942	Cbp80	100	54.250	Drosophila_melanogaster
ENSTGUG00000001472	NCBP1	82	31.905	FBgn0038887	CG7907	87	31.905	Drosophila_melanogaster
ENSTGUG00000001472	NCBP1	89	84.449	ENSETEG00000009705	NCBP1	89	84.017	Echinops_telfairi
ENSTGUG00000001472	NCBP1	100	70.389	ENSEBUG00000008386	NCBP1	100	69.887	Eptatretus_burgeri
ENSTGUG00000001472	NCBP1	100	83.522	ENSEASG00005022795	NCBP1	100	83.396	Equus_asinus_asinus
ENSTGUG00000001472	NCBP1	100	83.648	ENSECAG00000013847	NCBP1	100	83.522	Equus_caballus
ENSTGUG00000001472	NCBP1	95	78.628	ENSEEUG00000015973	NCBP1	99	78.496	Erinaceus_europaeus
ENSTGUG00000001472	NCBP1	99	77.233	ENSELUG00000022519	NCBP1	99	77.736	Esox_lucius
ENSTGUG00000001472	NCBP1	100	84.025	ENSFCAG00000001206	NCBP1	100	83.899	Felis_catus
ENSTGUG00000001472	NCBP1	98	93.639	ENSFALG00000001193	NCBP1	100	93.639	Ficedula_albicollis
ENSTGUG00000001472	NCBP1	100	84.025	ENSFDAG00000010864	NCBP1	100	83.899	Fukomys_damarensis
ENSTGUG00000001472	NCBP1	99	78.868	ENSFHEG00000000655	NCBP1	99	78.616	Fundulus_heteroclitus
ENSTGUG00000001472	NCBP1	99	77.889	ENSGMOG00000008653	NCBP1	99	77.107	Gadus_morhua
ENSTGUG00000001472	NCBP1	98	92.720	ENSGALG00000002087	NCBP1	100	92.095	Gallus_gallus
ENSTGUG00000001472	NCBP1	99	79.245	ENSGAFG00000017787	NCBP1	99	78.994	Gambusia_affinis
ENSTGUG00000001472	NCBP1	99	77.541	ENSGACG00000016772	NCBP1	98	76.788	Gasterosteus_aculeatus
ENSTGUG00000001472	NCBP1	100	89.308	ENSGAGG00000019483	NCBP1	100	89.308	Gopherus_agassizii
ENSTGUG00000001472	NCBP1	100	84.025	ENSGGOG00000001376	NCBP1	100	83.899	Gorilla_gorilla
ENSTGUG00000001472	NCBP1	99	79.748	ENSHBUG00000020843	NCBP1	99	78.715	Haplochromis_burtoni
ENSTGUG00000001472	NCBP1	100	84.025	ENSHGLG00000001882	NCBP1	100	83.899	Heterocephalus_glaber_female
ENSTGUG00000001472	NCBP1	100	73.400	ENSHGLG00000018112	-	100	73.149	Heterocephalus_glaber_female
ENSTGUG00000001472	NCBP1	100	84.025	ENSHGLG00100013014	NCBP1	100	83.899	Heterocephalus_glaber_male
ENSTGUG00000001472	NCBP1	100	73.149	ENSHGLG00100017373	-	100	72.898	Heterocephalus_glaber_male
ENSTGUG00000001472	NCBP1	79	67.302	ENSHCOG00000000204	NCBP1	92	66.984	Hippocampus_comes
ENSTGUG00000001472	NCBP1	99	78.365	ENSIPUG00000007275	ncbp1	99	78.365	Ictalurus_punctatus
ENSTGUG00000001472	NCBP1	100	84.151	ENSSTOG00000002695	NCBP1	100	84.025	Ictidomys_tridecemlineatus
ENSTGUG00000001472	NCBP1	99	79.119	ENSKMAG00000003594	NCBP1	99	78.411	Kryptolebias_marmoratus
ENSTGUG00000001472	NCBP1	99	77.916	ENSLBEG00000011661	NCBP1	99	76.894	Labrus_bergylta
ENSTGUG00000001472	NCBP1	100	76.617	ENSLACG00000013955	NCBP1	100	76.208	Latimeria_chalumnae
ENSTGUG00000001472	NCBP1	99	71.856	ENSLOCG00000009579	NCBP1	99	71.606	Lepisosteus_oculatus
ENSTGUG00000001472	NCBP1	100	83.648	ENSLAFG00000005999	NCBP1	100	83.522	Loxodonta_africana
ENSTGUG00000001472	NCBP1	100	84.025	ENSMFAG00000030994	NCBP1	100	83.899	Macaca_fascicularis
ENSTGUG00000001472	NCBP1	99	84.056	ENSMMUG00000012281	NCBP1	99	84.017	Macaca_mulatta
ENSTGUG00000001472	NCBP1	100	84.025	ENSMNEG00000042790	NCBP1	100	83.899	Macaca_nemestrina
ENSTGUG00000001472	NCBP1	100	84.025	ENSMLEG00000030374	NCBP1	100	83.899	Mandrillus_leucophaeus
ENSTGUG00000001472	NCBP1	99	80.000	ENSMAMG00000014806	NCBP1	99	78.967	Mastacembelus_armatus
ENSTGUG00000001472	NCBP1	97	78.266	ENSMZEG00005009290	-	99	77.649	Maylandia_zebra
ENSTGUG00000001472	NCBP1	99	79.748	ENSMZEG00005003469	NCBP1	99	78.715	Maylandia_zebra
ENSTGUG00000001472	NCBP1	99	83.186	ENSMAUG00000020583	Ncbp1	99	83.059	Mesocricetus_auratus
ENSTGUG00000001472	NCBP1	100	83.522	ENSMICG00000012682	NCBP1	100	83.396	Microcebus_murinus
ENSTGUG00000001472	NCBP1	100	83.145	ENSMOCG00000015818	Ncbp1	100	83.019	Microtus_ochrogaster
ENSTGUG00000001472	NCBP1	91	76.389	ENSMMOG00000002610	NCBP1	99	76.006	Mola_mola
ENSTGUG00000001472	NCBP1	100	83.270	ENSMODG00000003202	NCBP1	99	83.145	Monodelphis_domestica
ENSTGUG00000001472	NCBP1	99	78.868	ENSMALG00000003547	NCBP1	99	77.834	Monopterus_albus
ENSTGUG00000001472	NCBP1	100	83.270	MGP_CAROLIEiJ_G0025982	Ncbp1	100	83.145	Mus_caroli
ENSTGUG00000001472	NCBP1	100	83.270	ENSMUSG00000028330	Ncbp1	100	83.145	Mus_musculus
ENSTGUG00000001472	NCBP1	100	83.522	MGP_PahariEiJ_G0028318	Ncbp1	100	83.396	Mus_pahari
ENSTGUG00000001472	NCBP1	100	83.270	MGP_SPRETEiJ_G0026945	Ncbp1	100	83.145	Mus_spretus
ENSTGUG00000001472	NCBP1	100	83.899	ENSMPUG00000006399	NCBP1	100	83.774	Mustela_putorius_furo
ENSTGUG00000001472	NCBP1	99	82.781	ENSMLUG00000015201	NCBP1	100	82.653	Myotis_lucifugus
ENSTGUG00000001472	NCBP1	100	83.396	ENSNGAG00000014101	Ncbp1	100	83.145	Nannospalax_galili
ENSTGUG00000001472	NCBP1	75	88.596	ENSNBRG00000014674	NCBP1	96	88.596	Neolamprologus_brichardi
ENSTGUG00000001472	NCBP1	100	84.025	ENSNLEG00000016909	NCBP1	100	83.899	Nomascus_leucogenys
ENSTGUG00000001472	NCBP1	89	86.784	ENSMEUG00000010672	NCBP1	90	85.903	Notamacropus_eugenii
ENSTGUG00000001472	NCBP1	84	76.134	ENSOPRG00000002144	-	88	75.294	Ochotona_princeps
ENSTGUG00000001472	NCBP1	100	84.025	ENSODEG00000003232	NCBP1	100	83.899	Octodon_degus
ENSTGUG00000001472	NCBP1	99	79.748	ENSONIG00000001502	NCBP1	99	78.715	Oreochromis_niloticus
ENSTGUG00000001472	NCBP1	78	85.554	ENSOANG00000001918	NCBP1	100	85.072	Ornithorhynchus_anatinus
ENSTGUG00000001472	NCBP1	98	83.590	ENSOCUG00000013853	NCBP1	97	82.949	Oryctolagus_cuniculus
ENSTGUG00000001472	NCBP1	99	78.473	ENSORLG00000011008	NCBP1	99	77.694	Oryzias_latipes
ENSTGUG00000001472	NCBP1	99	78.598	ENSORLG00020017455	NCBP1	99	77.820	Oryzias_latipes_hni
ENSTGUG00000001472	NCBP1	99	78.598	ENSORLG00015012127	NCBP1	99	77.820	Oryzias_latipes_hsok
ENSTGUG00000001472	NCBP1	99	78.598	ENSOMEG00000020698	NCBP1	99	77.945	Oryzias_melastigma
ENSTGUG00000001472	NCBP1	100	83.940	ENSOGAG00000013888	NCBP1	100	83.814	Otolemur_garnettii
ENSTGUG00000001472	NCBP1	100	83.522	ENSOARG00000011233	NCBP1	100	83.396	Ovis_aries
ENSTGUG00000001472	NCBP1	100	84.025	ENSPPAG00000026462	NCBP1	100	83.899	Pan_paniscus
ENSTGUG00000001472	NCBP1	100	84.025	ENSPPRG00000022574	NCBP1	100	83.899	Panthera_pardus
ENSTGUG00000001472	NCBP1	100	84.025	ENSPTIG00000018507	NCBP1	100	83.899	Panthera_tigris_altaica
ENSTGUG00000001472	NCBP1	100	84.025	ENSPTRG00000021167	NCBP1	100	83.899	Pan_troglodytes
ENSTGUG00000001472	NCBP1	100	84.025	ENSPANG00000025591	NCBP1	100	83.899	Papio_anubis
ENSTGUG00000001472	NCBP1	100	77.358	ENSPKIG00000015861	NCBP1	100	77.358	Paramormyrops_kingsleyae
ENSTGUG00000001472	NCBP1	64	94.325	ENSPSIG00000009558	NCBP1	99	94.325	Pelodiscus_sinensis
ENSTGUG00000001472	NCBP1	99	74.529	ENSPMGG00000020476	NCBP1	99	74.185	Periophthalmus_magnuspinnatus
ENSTGUG00000001472	NCBP1	100	82.893	ENSPEMG00000020105	Ncbp1	100	82.767	Peromyscus_maniculatus_bairdii
ENSTGUG00000001472	NCBP1	100	63.366	ENSPMAG00000005533	NCBP1	100	62.995	Petromyzon_marinus
ENSTGUG00000001472	NCBP1	100	83.019	ENSPCIG00000015800	NCBP1	99	87.928	Phascolarctos_cinereus
ENSTGUG00000001472	NCBP1	99	78.947	ENSPFOG00000004158	NCBP1	99	78.446	Poecilia_formosa
ENSTGUG00000001472	NCBP1	99	79.245	ENSPLAG00000020002	NCBP1	99	78.994	Poecilia_latipinna
ENSTGUG00000001472	NCBP1	99	79.245	ENSPMEG00000019821	NCBP1	99	78.994	Poecilia_mexicana
ENSTGUG00000001472	NCBP1	99	79.271	ENSPREG00000006035	NCBP1	99	78.643	Poecilia_reticulata
ENSTGUG00000001472	NCBP1	100	84.025	ENSPPYG00000019426	NCBP1	100	83.899	Pongo_abelii
ENSTGUG00000001472	NCBP1	90	79.373	ENSPCAG00000009943	NCBP1	90	79.112	Procavia_capensis
ENSTGUG00000001472	NCBP1	82	90.789	ENSPCOG00000020024	NCBP1	98	90.789	Propithecus_coquereli
ENSTGUG00000001472	NCBP1	100	83.648	ENSPVAG00000005924	NCBP1	100	83.522	Pteropus_vampyrus
ENSTGUG00000001472	NCBP1	91	77.670	ENSPNYG00000002140	NCBP1	99	77.285	Pundamilia_nyererei
ENSTGUG00000001472	NCBP1	99	79.271	ENSPNAG00000027753	NCBP1	99	79.271	Pygocentrus_nattereri
ENSTGUG00000001472	NCBP1	100	83.396	ENSRNOG00000023605	Ncbp1	100	83.270	Rattus_norvegicus
ENSTGUG00000001472	NCBP1	100	84.025	ENSRBIG00000043175	NCBP1	100	83.899	Rhinopithecus_bieti
ENSTGUG00000001472	NCBP1	100	84.025	ENSRROG00000029767	NCBP1	100	83.899	Rhinopithecus_roxellana
ENSTGUG00000001472	NCBP1	100	84.025	ENSSBOG00000019378	NCBP1	100	83.899	Saimiri_boliviensis_boliviensis
ENSTGUG00000001472	NCBP1	60	87.850	ENSSHAG00000015882	NCBP1	63	87.850	Sarcophilus_harrisii
ENSTGUG00000001472	NCBP1	99	77.679	ENSSFOG00015001872	NCBP1	100	76.981	Scleropages_formosus
ENSTGUG00000001472	NCBP1	99	78.742	ENSSMAG00000007463	NCBP1	99	77.834	Scophthalmus_maximus
ENSTGUG00000001472	NCBP1	99	78.841	ENSSDUG00000007019	NCBP1	100	78.052	Seriola_dumerili
ENSTGUG00000001472	NCBP1	99	79.497	ENSSLDG00000021924	NCBP1	99	78.463	Seriola_lalandi_dorsalis
ENSTGUG00000001472	NCBP1	85	80.778	ENSSARG00000007274	NCBP1	87	80.562	Sorex_araneus
ENSTGUG00000001472	NCBP1	100	84.969	ENSSPUG00000008609	NCBP1	100	84.720	Sphenodon_punctatus
ENSTGUG00000001472	NCBP1	99	80.126	ENSSPAG00000012550	NCBP1	99	79.093	Stegastes_partitus
ENSTGUG00000001472	NCBP1	100	83.774	ENSSSCG00000005366	NCBP1	100	83.648	Sus_scrofa
ENSTGUG00000001472	NCBP1	99	78.994	ENSTRUG00000005287	NCBP1	99	77.960	Takifugu_rubripes
ENSTGUG00000001472	NCBP1	100	80.629	ENSTBEG00000004035	NCBP1	100	80.503	Tupaia_belangeri
ENSTGUG00000001472	NCBP1	88	89.315	ENSTTRG00000000507	NCBP1	88	89.113	Tursiops_truncatus
ENSTGUG00000001472	NCBP1	100	83.899	ENSUAMG00000005471	NCBP1	100	83.774	Ursus_americanus
ENSTGUG00000001472	NCBP1	97	81.912	ENSUMAG00000011865	NCBP1	100	83.576	Ursus_maritimus
ENSTGUG00000001472	NCBP1	100	80.126	ENSVPAG00000010537	NCBP1	100	80.000	Vicugna_pacos
ENSTGUG00000001472	NCBP1	100	84.025	ENSVVUG00000019725	NCBP1	100	83.899	Vulpes_vulpes
ENSTGUG00000001472	NCBP1	100	77.107	ENSXETG00000010179	ncbp1	100	76.730	Xenopus_tropicalis
ENSTGUG00000001472	NCBP1	99	79.119	ENSXMAG00000018253	NCBP1	99	78.868	Xiphophorus_maculatus