EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000001548 (Gene tree)
Gene ID: 100221697
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 3178 bases
Position: chrZ:32305100-32308277
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000001599	TUDOR	PF00567.24	5.4e-05	1	1
ENSTGUP00000001599	SMN	PF06003.12	4.3e-114	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000001613	-	834	-	ENSTGUP00000001599	278 (aa)	-	H0YTI6

Gene Model

Click here to download ENSTGUG00000001548's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000001548	-	96	60.526	ENSG00000172062	SMN1	98	58.719	Homo_sapiens
ENSTGUG00000001548	-	96	60.526	ENSG00000205571	SMN2	98	58.719	Homo_sapiens
ENSTGUG00000001548	-	97	47.810	ENSAPOG00000011324	smn1	91	51.087	Acanthochromis_polyacanthus
ENSTGUG00000001548	-	96	61.278	ENSAMEG00000003316	-	91	60.932	Ailuropoda_melanoleuca
ENSTGUG00000001548	-	94	43.911	ENSACIG00000019772	-	97	48.905	Amphilophus_citrinellus
ENSTGUG00000001548	-	97	48.727	ENSAOCG00000024444	smn1	91	50.725	Amphiprion_ocellaris
ENSTGUG00000001548	-	97	48.339	ENSAPEG00000016504	smn1	91	50.725	Amphiprion_percula
ENSTGUG00000001548	-	97	48.571	ENSATEG00000002182	smn1	81	51.237	Anabas_testudineus
ENSTGUG00000001548	-	69	75.000	ENSAPLG00000010912	-	92	75.000	Anas_platyrhynchos
ENSTGUG00000001548	-	95	58.333	ENSACAG00000010017	-	89	60.000	Anolis_carolinensis
ENSTGUG00000001548	-	100	54.671	ENSANAG00000032133	-	94	57.597	Aotus_nancymaae
ENSTGUG00000001548	-	95	49.621	ENSACLG00000007308	smn1	88	52.941	Astatotilapia_calliptera
ENSTGUG00000001548	-	96	60.075	ENSBTAG00000005743	SMN2	94	58.633	Bos_taurus
ENSTGUG00000001548	-	96	55.839	ENSCJAG00000016290	-	94	57.801	Callithrix_jacchus
ENSTGUG00000001548	-	96	58.394	ENSCAFG00000007812	SMN	94	60.432	Canis_familiaris
ENSTGUG00000001548	-	96	59.124	ENSCAFG00020019229	-	88	60.432	Canis_lupus_dingo
ENSTGUG00000001548	-	96	61.049	ENSCHIG00000015559	-	92	59.431	Capra_hircus
ENSTGUG00000001548	-	100	58.273	ENSTSYG00000012058	-	94	59.498	Carlito_syrichta
ENSTGUG00000001548	-	73	50.000	ENSCAPG00000011021	-	89	46.977	Cavia_aperea
ENSTGUG00000001548	-	99	57.762	ENSCPOG00000012328	-	93	57.762	Cavia_porcellus
ENSTGUG00000001548	-	99	58.394	ENSCPOG00000036973	-	92	59.489	Cavia_porcellus
ENSTGUG00000001548	-	96	54.380	ENSCCAG00000018127	-	94	56.940	Cebus_capucinus
ENSTGUG00000001548	-	96	60.902	ENSCATG00000037002	-	98	59.075	Cercocebus_atys
ENSTGUG00000001548	-	99	54.513	ENSCLAG00000000284	-	92	57.401	Chinchilla_lanigera
ENSTGUG00000001548	-	96	61.278	ENSCSAG00000015688	-	94	59.431	Chlorocebus_sabaeus
ENSTGUG00000001548	-	70	80.000	ENSCHOG00000007346	-	100	56.078	Choloepus_hoffmanni
ENSTGUG00000001548	-	97	66.052	ENSCPBG00000010968	-	93	67.843	Chrysemys_picta_bellii
ENSTGUG00000001548	-	96	61.278	ENSCANG00000038242	-	98	59.783	Colobus_angolensis_palliatus
ENSTGUG00000001548	-	99	56.000	ENSCANG00000033324	-	92	56.000	Colobus_angolensis_palliatus
ENSTGUG00000001548	-	100	42.806	ENSCGRG00001016998	-	93	43.885	Cricetulus_griseus_chok1gshd
ENSTGUG00000001548	-	100	54.545	ENSCGRG00001017959	-	94	57.914	Cricetulus_griseus_chok1gshd
ENSTGUG00000001548	-	100	54.545	ENSCGRG00000007698	Smn1	94	57.914	Cricetulus_griseus_crigri
ENSTGUG00000001548	-	95	46.739	ENSCSEG00000015227	smn1	94	47.857	Cynoglossus_semilaevis
ENSTGUG00000001548	-	95	45.520	ENSCVAG00000007498	smn1	91	50.916	Cyprinodon_variegatus
ENSTGUG00000001548	-	96	52.399	ENSDARG00000018494	smn1	92	53.791	Danio_rerio
ENSTGUG00000001548	-	83	56.277	ENSDNOG00000007283	-	94	56.710	Dasypus_novemcinctus
ENSTGUG00000001548	-	66	51.087	ENSDNOG00000045949	-	94	47.368	Dasypus_novemcinctus
ENSTGUG00000001548	-	96	53.759	ENSDORG00000007082	Smn1	97	52.313	Dipodomys_ordii
ENSTGUG00000001548	-	68	52.660	ENSETEG00000001406	-	96	52.736	Echinops_telfairi
ENSTGUG00000001548	-	95	40.690	ENSEBUG00000011902	smn1	92	38.516	Eptatretus_burgeri
ENSTGUG00000001548	-	97	54.982	ENSEASG00005018000	-	95	54.982	Equus_asinus_asinus
ENSTGUG00000001548	-	96	60.526	ENSECAG00000015215	-	95	58.993	Equus_caballus
ENSTGUG00000001548	-	92	56.078	ENSEEUG00000015777	-	100	57.812	Erinaceus_europaeus
ENSTGUG00000001548	-	95	54.945	ENSELUG00000018067	smn1	91	51.648	Esox_lucius
ENSTGUG00000001548	-	96	62.030	ENSFCAG00000028292	SMN	93	61.798	Felis_catus
ENSTGUG00000001548	-	92	78.682	ENSFALG00000012320	-	88	78.906	Ficedula_albicollis
ENSTGUG00000001548	-	99	54.355	ENSFDAG00000017683	-	92	57.706	Fukomys_damarensis
ENSTGUG00000001548	-	95	49.270	ENSFHEG00000018508	smn1	93	50.355	Fundulus_heteroclitus
ENSTGUG00000001548	-	99	45.126	ENSGMOG00000017279	smn1	92	46.570	Gadus_morhua
ENSTGUG00000001548	-	96	72.015	ENSGALG00000002430	SMN	93	72.593	Gallus_gallus
ENSTGUG00000001548	-	95	48.881	ENSGAFG00000009501	smn1	91	52.000	Gambusia_affinis
ENSTGUG00000001548	-	95	48.507	ENSGACG00000010584	smn1	88	51.866	Gasterosteus_aculeatus
ENSTGUG00000001548	-	97	65.556	ENSGAGG00000011374	-	93	66.052	Gopherus_agassizii
ENSTGUG00000001548	-	96	47.761	ENSGGOG00000003872	-	99	52.313	Gorilla_gorilla
ENSTGUG00000001548	-	63	61.932	ENSGGOG00000026704	-	95	58.454	Gorilla_gorilla
ENSTGUG00000001548	-	95	50.000	ENSHBUG00000013987	smn1	91	52.941	Haplochromis_burtoni
ENSTGUG00000001548	-	99	55.636	ENSHGLG00000001905	-	94	56.159	Heterocephalus_glaber_female
ENSTGUG00000001548	-	99	53.741	ENSHGLG00000001018	-	92	57.348	Heterocephalus_glaber_female
ENSTGUG00000001548	-	99	55.636	ENSHGLG00100018676	-	99	56.159	Heterocephalus_glaber_male
ENSTGUG00000001548	-	99	53.741	ENSHGLG00100011252	-	92	57.348	Heterocephalus_glaber_male
ENSTGUG00000001548	-	97	47.653	ENSHCOG00000017136	smn1	89	48.746	Hippocampus_comes
ENSTGUG00000001548	-	95	49.071	ENSIPUG00000012580	smn1	81	51.493	Ictalurus_punctatus
ENSTGUG00000001548	-	96	60.902	ENSSTOG00000012288	-	99	59.075	Ictidomys_tridecemlineatus
ENSTGUG00000001548	-	60	53.571	ENSJJAG00000014853	-	95	52.688	Jaculus_jaculus
ENSTGUG00000001548	-	97	48.201	ENSKMAG00000007239	smn1	93	51.439	Kryptolebias_marmoratus
ENSTGUG00000001548	-	97	51.071	ENSLBEG00000022550	smn1	93	50.530	Labrus_bergylta
ENSTGUG00000001548	-	95	37.269	ENSLACG00000009808	-	92	38.194	Latimeria_chalumnae
ENSTGUG00000001548	-	95	32.000	ENSLOCG00000000801	-	88	31.461	Lepisosteus_oculatus
ENSTGUG00000001548	-	95	51.894	ENSLOCG00000011339	smn1	91	52.239	Lepisosteus_oculatus
ENSTGUG00000001548	-	96	62.222	ENSLAFG00000003425	-	91	60.284	Loxodonta_africana
ENSTGUG00000001548	-	96	60.902	ENSMFAG00000031523	SMN1	98	59.075	Macaca_fascicularis
ENSTGUG00000001548	-	97	56.827	ENSMFAG00000008812	-	93	56.522	Macaca_fascicularis
ENSTGUG00000001548	-	97	56.089	ENSMMUG00000030594	-	93	55.797	Macaca_mulatta
ENSTGUG00000001548	-	96	60.902	ENSMMUG00000020214	SMN1	98	59.075	Macaca_mulatta
ENSTGUG00000001548	-	96	60.902	ENSMNEG00000035094	-	98	59.075	Macaca_nemestrina
ENSTGUG00000001548	-	73	49.510	ENSMNEG00000036423	-	79	49.510	Macaca_nemestrina
ENSTGUG00000001548	-	96	60.902	ENSMLEG00000041902	-	98	59.286	Mandrillus_leucophaeus
ENSTGUG00000001548	-	95	50.182	ENSMAMG00000011034	smn1	91	49.638	Mastacembelus_armatus
ENSTGUG00000001548	-	95	50.376	ENSMZEG00005013634	smn1	91	52.963	Maylandia_zebra
ENSTGUG00000001548	-	69	68.229	ENSMGAG00000008889	-	90	68.229	Meleagris_gallopavo
ENSTGUG00000001548	-	64	61.798	ENSMAUG00000010262	Smn1	94	57.500	Mesocricetus_auratus
ENSTGUG00000001548	-	83	55.794	ENSMICG00000034708	-	89	60.891	Microcebus_murinus
ENSTGUG00000001548	-	100	56.294	ENSMOCG00000017833	Smn1	94	59.712	Microtus_ochrogaster
ENSTGUG00000001548	-	96	47.810	ENSMMOG00000005504	smn1	93	46.454	Mola_mola
ENSTGUG00000001548	-	99	60.702	ENSMODG00000001436	-	93	63.345	Monodelphis_domestica
ENSTGUG00000001548	-	95	48.339	ENSMALG00000008025	smn1	91	50.725	Monopterus_albus
ENSTGUG00000001548	-	100	58.633	MGP_CAROLIEiJ_G0018836	Smn1	94	58.633	Mus_caroli
ENSTGUG00000001548	-	100	57.914	ENSMUSG00000021645	Smn1	94	57.914	Mus_musculus
ENSTGUG00000001548	-	100	56.294	MGP_PahariEiJ_G0015911	Smn1	94	57.554	Mus_pahari
ENSTGUG00000001548	-	100	57.554	MGP_SPRETEiJ_G0019718	Smn1	94	57.554	Mus_spretus
ENSTGUG00000001548	-	100	60.932	ENSMPUG00000014470	-	97	60.932	Mustela_putorius_furo
ENSTGUG00000001548	-	96	60.219	ENSMLUG00000010603	-	90	57.840	Myotis_lucifugus
ENSTGUG00000001548	-	100	58.423	ENSNGAG00000019833	Smn1	94	58.423	Nannospalax_galili
ENSTGUG00000001548	-	95	50.187	ENSNBRG00000023000	smn1	91	52.747	Neolamprologus_brichardi
ENSTGUG00000001548	-	100	58.719	ENSNLEG00000004454	-	98	58.719	Nomascus_leucogenys
ENSTGUG00000001548	-	83	56.034	ENSMEUG00000011393	-	99	60.173	Notamacropus_eugenii
ENSTGUG00000001548	-	92	58.594	ENSOPRG00000002015	-	100	59.922	Ochotona_princeps
ENSTGUG00000001548	-	99	54.286	ENSODEG00000015976	-	95	59.489	Octodon_degus
ENSTGUG00000001548	-	96	49.442	ENSONIG00000011799	smn1	92	52.364	Oreochromis_niloticus
ENSTGUG00000001548	-	97	63.004	ENSOANG00000001626	-	94	63.370	Ornithorhynchus_anatinus
ENSTGUG00000001548	-	99	48.772	ENSOCUG00000025183	-	93	50.714	Oryctolagus_cuniculus
ENSTGUG00000001548	-	99	56.491	ENSOCUG00000017097	-	93	58.845	Oryctolagus_cuniculus
ENSTGUG00000001548	-	99	55.208	ENSOCUG00000026649	-	93	57.500	Oryctolagus_cuniculus
ENSTGUG00000001548	-	95	48.507	ENSORLG00000010552	smn1	91	52.256	Oryzias_latipes
ENSTGUG00000001548	-	95	50.373	ENSORLG00020007936	smn1	90	45.693	Oryzias_latipes_hni
ENSTGUG00000001548	-	95	48.315	ENSORLG00015022425	smn1	91	52.632	Oryzias_latipes_hsok
ENSTGUG00000001548	-	97	43.945	ENSOMEG00000007824	smn1	91	51.449	Oryzias_melastigma
ENSTGUG00000001548	-	96	55.185	ENSOGAG00000031414	-	96	53.929	Otolemur_garnettii
ENSTGUG00000001548	-	95	59.023	ENSOARG00000005425	-	95	59.023	Ovis_aries
ENSTGUG00000001548	-	96	60.674	ENSPPAG00000036640	-	98	58.865	Pan_paniscus
ENSTGUG00000001548	-	96	62.030	ENSPPRG00000005575	-	93	61.798	Panthera_pardus
ENSTGUG00000001548	-	96	62.030	ENSPTIG00000007745	-	95	60.072	Panthera_tigris_altaica
ENSTGUG00000001548	-	96	59.851	ENSPTRG00000016955	-	98	58.099	Pan_troglodytes
ENSTGUG00000001548	-	97	57.565	ENSPANG00000000253	-	92	57.246	Papio_anubis
ENSTGUG00000001548	-	100	59.075	ENSPANG00000013601	-	94	59.075	Papio_anubis
ENSTGUG00000001548	-	95	48.106	ENSPKIG00000011096	smn1	91	48.014	Paramormyrops_kingsleyae
ENSTGUG00000001548	-	94	62.963	ENSPSIG00000014787	-	86	61.871	Pelodiscus_sinensis
ENSTGUG00000001548	-	97	46.909	ENSPMGG00000012285	smn1	96	43.972	Periophthalmus_magnuspinnatus
ENSTGUG00000001548	-	92	42.586	ENSPMAG00000005004	smn1	92	41.155	Petromyzon_marinus
ENSTGUG00000001548	-	99	60.140	ENSPCIG00000025764	-	94	62.989	Phascolarctos_cinereus
ENSTGUG00000001548	-	95	48.175	ENSPFOG00000007786	smn1	91	52.000	Poecilia_formosa
ENSTGUG00000001548	-	95	49.270	ENSPLAG00000012071	smn1	91	52.364	Poecilia_latipinna
ENSTGUG00000001548	-	95	48.507	ENSPMEG00000017085	smn1	91	52.000	Poecilia_mexicana
ENSTGUG00000001548	-	95	49.627	ENSPREG00000005824	smn1	91	53.818	Poecilia_reticulata
ENSTGUG00000001548	-	92	59.144	ENSPPYG00000015533	-	92	59.144	Pongo_abelii
ENSTGUG00000001548	-	91	41.339	ENSPPYG00000019189	-	99	41.634	Pongo_abelii
ENSTGUG00000001548	-	92	59.073	ENSPCAG00000004187	-	94	59.846	Procavia_capensis
ENSTGUG00000001548	-	63	60.920	ENSPCOG00000022307	-	89	56.311	Propithecus_coquereli
ENSTGUG00000001548	-	96	62.030	ENSPVAG00000005977	-	93	60.507	Pteropus_vampyrus
ENSTGUG00000001548	-	95	50.187	ENSPNYG00000014148	smn1	91	52.747	Pundamilia_nyererei
ENSTGUG00000001548	-	100	46.528	ENSPNAG00000014007	smn1	84	48.592	Pygocentrus_nattereri
ENSTGUG00000001548	-	100	54.196	ENSRNOG00000018067	Smn1	94	57.914	Rattus_norvegicus
ENSTGUG00000001548	-	99	51.273	ENSRBIG00000036775	-	92	51.273	Rhinopithecus_bieti
ENSTGUG00000001548	-	96	61.278	ENSRBIG00000037052	-	94	59.431	Rhinopithecus_bieti
ENSTGUG00000001548	-	99	49.455	ENSRROG00000031088	-	95	48.000	Rhinopithecus_roxellana
ENSTGUG00000001548	-	96	61.278	ENSRROG00000039399	-	98	59.431	Rhinopithecus_roxellana
ENSTGUG00000001548	-	89	52.941	ENSSBOG00000020112	-	87	53.543	Saimiri_boliviensis_boliviensis
ENSTGUG00000001548	-	96	55.109	ENSSBOG00000011665	-	94	58.007	Saimiri_boliviensis_boliviensis
ENSTGUG00000001548	-	99	60.140	ENSSHAG00000001499	-	94	61.940	Sarcophilus_harrisii
ENSTGUG00000001548	-	95	52.652	ENSSFOG00015015507	smn1	91	51.460	Scleropages_formosus
ENSTGUG00000001548	-	95	43.682	ENSSMAG00000007922	smn1	91	49.455	Scophthalmus_maximus
ENSTGUG00000001548	-	95	46.296	ENSSDUG00000018533	smn1	91	51.087	Seriola_dumerili
ENSTGUG00000001548	-	95	46.667	ENSSLDG00000021135	smn1	91	51.449	Seriola_lalandi_dorsalis
ENSTGUG00000001548	-	97	64.945	ENSSPUG00000000373	-	93	66.300	Sphenodon_punctatus
ENSTGUG00000001548	-	97	46.886	ENSSPAG00000004345	smn1	93	50.538	Stegastes_partitus
ENSTGUG00000001548	-	96	62.406	ENSSSCG00000016970	-	95	61.210	Sus_scrofa
ENSTGUG00000001548	-	96	44.403	ENSSSCG00000029127	-	86	45.489	Sus_scrofa
ENSTGUG00000001548	-	96	46.840	ENSTRUG00000000736	smn	92	46.377	Takifugu_rubripes
ENSTGUG00000001548	-	96	45.149	ENSTNIG00000009892	smn1	92	47.601	Tetraodon_nigroviridis
ENSTGUG00000001548	-	63	65.909	ENSTBEG00000002399	-	96	62.376	Tupaia_belangeri
ENSTGUG00000001548	-	63	63.636	ENSTTRG00000005080	-	93	59.498	Tursiops_truncatus
ENSTGUG00000001548	-	63	64.773	ENSUAMG00000024947	-	73	61.386	Ursus_americanus
ENSTGUG00000001548	-	96	61.278	ENSUMAG00000007842	-	70	60.932	Ursus_maritimus
ENSTGUG00000001548	-	96	54.212	ENSVPAG00000009887	-	97	52.542	Vicugna_pacos
ENSTGUG00000001548	-	96	58.394	ENSVVUG00000006934	-	94	60.432	Vulpes_vulpes
ENSTGUG00000001548	-	91	34.586	ENSXETG00000004912	-	81	58.065	Xenopus_tropicalis
ENSTGUG00000001548	-	95	53.585	ENSXETG00000018189	smn2	88	55.849	Xenopus_tropicalis
ENSTGUG00000001548	-	96	48.519	ENSXMAG00000001521	smn1	92	51.636	Xiphophorus_maculatus