EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000001600 (Gene tree)
Gene ID: 100225687
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 366 bases
Position: chr23:5291255-5291620
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000001649	LSM	PF01423.22	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000001663	-	366	-	ENSTGUP00000001649	122 (aa)	-	H0YTN6

Gene Model

Click here to download ENSTGUG00000001600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000001600	-	100	99.180	ENSTGUG00000001602	-	100	99.180
ENSTGUG00000001600	-	58	33.803	ENSTGUG00000005095	SNRPD1	75	32.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000001600	-	97	72.881	ENSG00000181817	LSM10	96	72.881	Homo_sapiens
ENSTGUG00000001600	-	100	70.492	ENSAMEG00000019854	LSM10	99	70.492	Ailuropoda_melanoleuca
ENSTGUG00000001600	-	93	66.372	ENSACIG00000015420	oscp1a	75	66.372	Amphilophus_citrinellus
ENSTGUG00000001600	-	95	65.517	ENSAOCG00000014654	-	96	65.517	Amphiprion_ocellaris
ENSTGUG00000001600	-	84	68.627	ENSAOCG00000015607	LSM10	79	68.627	Amphiprion_ocellaris
ENSTGUG00000001600	-	95	65.517	ENSAOCG00000015618	LSM10	96	65.517	Amphiprion_ocellaris
ENSTGUG00000001600	-	95	65.517	ENSAPEG00000021845	-	96	65.517	Amphiprion_percula
ENSTGUG00000001600	-	84	68.627	ENSAPEG00000021851	LSM10	79	68.627	Amphiprion_percula
ENSTGUG00000001600	-	95	60.345	ENSATEG00000006310	oscp1a	86	60.345	Anabas_testudineus
ENSTGUG00000001600	-	100	74.590	ENSACAG00000001231	LSM10	99	74.590	Anolis_carolinensis
ENSTGUG00000001600	-	97	73.729	ENSANAG00000018759	-	96	73.729	Aotus_nancymaae
ENSTGUG00000001600	-	97	72.034	ENSANAG00000031489	-	97	72.034	Aotus_nancymaae
ENSTGUG00000001600	-	95	65.517	ENSACLG00000004728	oscp1a	94	65.517	Astatotilapia_calliptera
ENSTGUG00000001600	-	97	64.407	ENSAMXG00000025301	oscp1a	98	64.407	Astyanax_mexicanus
ENSTGUG00000001600	-	97	73.729	ENSBTAG00000024096	LSM10	97	73.729	Bos_taurus
ENSTGUG00000001600	-	97	73.729	ENSCJAG00000044880	LSM10	96	73.729	Callithrix_jacchus
ENSTGUG00000001600	-	100	71.311	ENSCAFG00000003382	LSM10	99	71.311	Canis_familiaris
ENSTGUG00000001600	-	100	71.311	ENSCAFG00020008920	LSM10	99	71.311	Canis_lupus_dingo
ENSTGUG00000001600	-	97	73.729	ENSCHIG00000009398	LSM10	97	73.729	Capra_hircus
ENSTGUG00000001600	-	100	70.492	ENSCAPG00000012567	LSM10	99	70.492	Cavia_aperea
ENSTGUG00000001600	-	100	70.492	ENSCPOG00000039302	LSM10	99	70.492	Cavia_porcellus
ENSTGUG00000001600	-	97	70.339	ENSCCAG00000008378	-	96	70.339	Cebus_capucinus
ENSTGUG00000001600	-	97	73.729	ENSCCAG00000018913	-	96	73.729	Cebus_capucinus
ENSTGUG00000001600	-	100	69.672	ENSCATG00000006589	LSM10	99	69.672	Cercocebus_atys
ENSTGUG00000001600	-	100	70.492	ENSCLAG00000008633	LSM10	99	70.492	Chinchilla_lanigera
ENSTGUG00000001600	-	100	69.672	ENSCSAG00000000134	LSM10	99	69.672	Chlorocebus_sabaeus
ENSTGUG00000001600	-	97	71.667	ENSCHOG00000008615	LSM10	96	71.667	Choloepus_hoffmanni
ENSTGUG00000001600	-	84	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSTGUG00000001600	-	100	69.672	ENSCANG00000019928	LSM10	99	69.672	Colobus_angolensis_palliatus
ENSTGUG00000001600	-	99	71.901	ENSCGRG00001004317	-	99	71.901	Cricetulus_griseus_chok1gshd
ENSTGUG00000001600	-	94	64.103	ENSCGRG00001022673	-	94	64.103	Cricetulus_griseus_chok1gshd
ENSTGUG00000001600	-	99	71.901	ENSCGRG00000014935	-	99	71.901	Cricetulus_griseus_crigri
ENSTGUG00000001600	-	94	64.103	ENSCGRG00000015514	-	94	64.103	Cricetulus_griseus_crigri
ENSTGUG00000001600	-	94	60.000	ENSCSEG00000010374	oscp1a	77	60.000	Cynoglossus_semilaevis
ENSTGUG00000001600	-	94	64.348	ENSCVAG00000001536	oscp1a	87	64.348	Cyprinodon_variegatus
ENSTGUG00000001600	-	99	65.289	ENSDARG00000101222	oscp1a	100	65.289	Danio_rerio
ENSTGUG00000001600	-	70	67.059	ENSDARG00000109563	CABZ01074453.1	99	67.059	Danio_rerio
ENSTGUG00000001600	-	100	72.131	ENSDNOG00000036662	LSM10	99	72.131	Dasypus_novemcinctus
ENSTGUG00000001600	-	99	71.901	ENSDORG00000007579	Lsm10	98	71.901	Dipodomys_ordii
ENSTGUG00000001600	-	100	70.492	ENSETEG00000005703	LSM10	99	70.492	Echinops_telfairi
ENSTGUG00000001600	-	95	52.586	ENSEBUG00000001312	oscp1a	95	52.586	Eptatretus_burgeri
ENSTGUG00000001600	-	100	72.131	ENSEASG00005012194	LSM10	99	72.131	Equus_asinus_asinus
ENSTGUG00000001600	-	100	72.131	ENSECAG00000005071	LSM10	99	72.131	Equus_caballus
ENSTGUG00000001600	-	100	71.311	ENSEEUG00000012032	LSM10	99	71.311	Erinaceus_europaeus
ENSTGUG00000001600	-	100	66.393	ENSELUG00000007452	oscp1a	100	66.393	Esox_lucius
ENSTGUG00000001600	-	100	96.721	ENSFALG00000000851	LSM10	99	96.721	Ficedula_albicollis
ENSTGUG00000001600	-	100	70.492	ENSFDAG00000021056	LSM10	99	70.492	Fukomys_damarensis
ENSTGUG00000001600	-	89	63.636	ENSFHEG00000001058	oscp1a	95	63.636	Fundulus_heteroclitus
ENSTGUG00000001600	-	94	63.478	ENSGMOG00000019832	oscp1a	96	63.478	Gadus_morhua
ENSTGUG00000001600	-	100	87.705	ENSGALG00000002127	LSM10	99	87.705	Gallus_gallus
ENSTGUG00000001600	-	95	61.345	ENSGAFG00000016445	oscp1a	95	61.345	Gambusia_affinis
ENSTGUG00000001600	-	96	60.684	ENSGACG00000002329	oscp1a	96	60.684	Gasterosteus_aculeatus
ENSTGUG00000001600	-	100	81.967	ENSGAGG00000024848	LSM10	99	81.967	Gopherus_agassizii
ENSTGUG00000001600	-	97	72.881	ENSGGOG00000003556	LSM10	96	72.881	Gorilla_gorilla
ENSTGUG00000001600	-	95	65.517	ENSHBUG00000001722	oscp1a	94	65.517	Haplochromis_burtoni
ENSTGUG00000001600	-	100	68.852	ENSHGLG00000011625	LSM10	99	68.852	Heterocephalus_glaber_female
ENSTGUG00000001600	-	100	68.852	ENSHGLG00100001769	LSM10	99	68.852	Heterocephalus_glaber_male
ENSTGUG00000001600	-	86	69.524	ENSIPUG00000005808	oscp1a	91	69.524	Ictalurus_punctatus
ENSTGUG00000001600	-	100	71.311	ENSSTOG00000000606	LSM10	99	71.311	Ictidomys_tridecemlineatus
ENSTGUG00000001600	-	95	62.931	ENSKMAG00000012143	oscp1a	96	62.931	Kryptolebias_marmoratus
ENSTGUG00000001600	-	97	63.559	ENSLBEG00000017764	oscp1a	97	63.559	Labrus_bergylta
ENSTGUG00000001600	-	100	65.574	ENSLACG00000015904	LSM10	94	65.574	Latimeria_chalumnae
ENSTGUG00000001600	-	96	68.376	ENSLOCG00000018277	oscp1a	96	68.376	Lepisosteus_oculatus
ENSTGUG00000001600	-	100	69.672	ENSLAFG00000009600	LSM10	99	69.672	Loxodonta_africana
ENSTGUG00000001600	-	100	69.672	ENSMFAG00000009115	LSM10	99	69.672	Macaca_fascicularis
ENSTGUG00000001600	-	100	69.672	ENSMMUG00000017338	LSM10	99	69.672	Macaca_mulatta
ENSTGUG00000001600	-	100	69.672	ENSMNEG00000020023	LSM10	99	69.672	Macaca_nemestrina
ENSTGUG00000001600	-	100	69.672	ENSMLEG00000025150	LSM10	99	69.672	Mandrillus_leucophaeus
ENSTGUG00000001600	-	97	61.864	ENSMAMG00000004427	oscp1a	97	61.864	Mastacembelus_armatus
ENSTGUG00000001600	-	95	65.517	ENSMZEG00005026307	oscp1a	94	65.517	Maylandia_zebra
ENSTGUG00000001600	-	100	85.246	ENSMGAG00000015707	LSM10	99	85.246	Meleagris_gallopavo
ENSTGUG00000001600	-	99	72.727	ENSMAUG00000016624	Lsm10	99	72.727	Mesocricetus_auratus
ENSTGUG00000001600	-	99	71.074	ENSMOCG00000021943	Lsm10	99	71.074	Microtus_ochrogaster
ENSTGUG00000001600	-	99	64.463	ENSMMOG00000013597	oscp1a	90	64.463	Mola_mola
ENSTGUG00000001600	-	100	79.508	ENSMODG00000023328	LSM10	99	79.508	Monodelphis_domestica
ENSTGUG00000001600	-	56	60.294	ENSMALG00000012661	oscp1a	54	60.294	Monopterus_albus
ENSTGUG00000001600	-	99	71.074	MGP_CAROLIEiJ_G0026467	Lsm10	100	72.043	Mus_caroli
ENSTGUG00000001600	-	99	71.074	ENSMUSG00000050188	Lsm10	100	72.043	Mus_musculus
ENSTGUG00000001600	-	99	71.074	MGP_PahariEiJ_G0028798	Lsm10	100	72.043	Mus_pahari
ENSTGUG00000001600	-	99	71.074	MGP_SPRETEiJ_G0027446	Lsm10	100	72.043	Mus_spretus
ENSTGUG00000001600	-	100	71.311	ENSMPUG00000018593	LSM10	99	71.311	Mustela_putorius_furo
ENSTGUG00000001600	-	100	71.311	ENSMLUG00000023895	LSM10	99	71.311	Myotis_lucifugus
ENSTGUG00000001600	-	99	69.421	ENSNGAG00000015011	Lsm10	98	69.421	Nannospalax_galili
ENSTGUG00000001600	-	96	64.103	ENSNBRG00000014306	oscp1a	95	64.103	Neolamprologus_brichardi
ENSTGUG00000001600	-	97	72.881	ENSNLEG00000033754	LSM10	96	72.881	Nomascus_leucogenys
ENSTGUG00000001600	-	100	79.508	ENSMEUG00000006313	LSM10	99	79.508	Notamacropus_eugenii
ENSTGUG00000001600	-	100	72.951	ENSOPRG00000001699	LSM10	99	72.951	Ochotona_princeps
ENSTGUG00000001600	-	100	70.492	ENSODEG00000019161	LSM10	99	70.492	Octodon_degus
ENSTGUG00000001600	-	97	64.407	ENSONIG00000020904	oscp1a	97	64.407	Oreochromis_niloticus
ENSTGUG00000001600	-	99	73.554	ENSOANG00000002066	LSM10	98	73.554	Ornithorhynchus_anatinus
ENSTGUG00000001600	-	100	72.131	ENSOCUG00000005333	LSM10	99	72.131	Oryctolagus_cuniculus
ENSTGUG00000001600	-	98	63.866	ENSORLG00000009504	oscp1a	98	63.866	Oryzias_latipes
ENSTGUG00000001600	-	98	63.866	ENSORLG00020016201	oscp1a	98	63.866	Oryzias_latipes_hni
ENSTGUG00000001600	-	98	63.025	ENSORLG00015007794	oscp1a	98	63.025	Oryzias_latipes_hsok
ENSTGUG00000001600	-	100	70.492	ENSOGAG00000002653	LSM10	99	70.492	Otolemur_garnettii
ENSTGUG00000001600	-	97	73.729	ENSOARG00000009596	LSM10	97	73.729	Ovis_aries
ENSTGUG00000001600	-	97	72.881	ENSPPAG00000023465	LSM10	96	72.881	Pan_paniscus
ENSTGUG00000001600	-	100	72.951	ENSPPRG00000014619	LSM10	99	72.951	Panthera_pardus
ENSTGUG00000001600	-	100	72.951	ENSPTIG00000004613	LSM10	99	72.951	Panthera_tigris_altaica
ENSTGUG00000001600	-	97	72.881	ENSPTRG00000000539	LSM10	96	72.881	Pan_troglodytes
ENSTGUG00000001600	-	100	69.672	ENSPANG00000023172	LSM10	99	69.672	Papio_anubis
ENSTGUG00000001600	-	96	70.085	ENSPKIG00000003728	oscp1a	94	70.085	Paramormyrops_kingsleyae
ENSTGUG00000001600	-	100	81.148	ENSPSIG00000000590	LSM10	99	81.148	Pelodiscus_sinensis
ENSTGUG00000001600	-	63	67.532	ENSPMGG00000015718	oscp1a	100	67.532	Periophthalmus_magnuspinnatus
ENSTGUG00000001600	-	84	81.553	ENSPCIG00000014865	LSM10	76	81.553	Phascolarctos_cinereus
ENSTGUG00000001600	-	92	67.857	ENSPFOG00000020490	oscp1a	95	67.857	Poecilia_formosa
ENSTGUG00000001600	-	95	65.517	ENSPLAG00000016537	oscp1a	89	65.517	Poecilia_latipinna
ENSTGUG00000001600	-	89	68.519	ENSPMEG00000000174	oscp1a	94	68.519	Poecilia_mexicana
ENSTGUG00000001600	-	95	64.655	ENSPREG00000009899	oscp1a	89	64.655	Poecilia_reticulata
ENSTGUG00000001600	-	97	72.881	ENSPPYG00000001539	LSM10	96	72.881	Pongo_abelii
ENSTGUG00000001600	-	97	71.186	ENSPCAG00000002520	LSM10	97	71.186	Procavia_capensis
ENSTGUG00000001600	-	100	70.492	ENSPVAG00000008644	LSM10	99	70.492	Pteropus_vampyrus
ENSTGUG00000001600	-	95	65.517	ENSPNYG00000003138	oscp1a	94	65.517	Pundamilia_nyererei
ENSTGUG00000001600	-	96	64.103	ENSPNAG00000028829	oscp1a	97	64.103	Pygocentrus_nattereri
ENSTGUG00000001600	-	99	70.248	ENSRNOG00000025716	Lsm10	99	70.248	Rattus_norvegicus
ENSTGUG00000001600	-	100	69.672	ENSRBIG00000001561	LSM10	99	69.672	Rhinopithecus_bieti
ENSTGUG00000001600	-	100	69.672	ENSRROG00000011414	LSM10	99	69.672	Rhinopithecus_roxellana
ENSTGUG00000001600	-	97	73.729	ENSSBOG00000036413	-	96	73.729	Saimiri_boliviensis_boliviensis
ENSTGUG00000001600	-	100	80.328	ENSSHAG00000018056	LSM10	99	80.328	Sarcophilus_harrisii
ENSTGUG00000001600	-	99	65.289	ENSSFOG00015019954	lsm10	99	65.289	Scleropages_formosus
ENSTGUG00000001600	-	93	62.832	ENSSMAG00000001297	oscp1a	97	62.832	Scophthalmus_maximus
ENSTGUG00000001600	-	97	64.706	ENSSDUG00000007090	oscp1a	97	64.706	Seriola_dumerili
ENSTGUG00000001600	-	93	64.035	ENSSLDG00000000800	oscp1a	94	64.035	Seriola_lalandi_dorsalis
ENSTGUG00000001600	-	100	70.161	ENSSARG00000004211	LSM10	99	70.968	Sorex_araneus
ENSTGUG00000001600	-	93	66.372	ENSSPAG00000009229	oscp1a	93	66.372	Stegastes_partitus
ENSTGUG00000001600	-	97	72.881	ENSSSCG00000038916	LSM10	96	72.881	Sus_scrofa
ENSTGUG00000001600	-	100	58.197	ENSTRUG00000010531	oscp1a	98	58.197	Takifugu_rubripes
ENSTGUG00000001600	-	97	72.034	ENSTBEG00000016674	LSM10	96	72.034	Tupaia_belangeri
ENSTGUG00000001600	-	100	71.311	ENSUAMG00000020265	LSM10	99	71.311	Ursus_americanus
ENSTGUG00000001600	-	100	71.311	ENSUMAG00000001438	LSM10	56	71.311	Ursus_maritimus
ENSTGUG00000001600	-	100	71.311	ENSVVUG00000023209	LSM10	99	71.311	Vulpes_vulpes
ENSTGUG00000001600	-	99	68.595	ENSXETG00000027631	lsm10	98	68.595	Xenopus_tropicalis
ENSTGUG00000001600	-	95	66.379	ENSXCOG00000018776	oscp1a	73	66.379	Xiphophorus_couchianus
ENSTGUG00000001600	-	93	67.826	ENSXMAG00000019963	oscp1a	92	67.826	Xiphophorus_maculatus