EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000001773 (Gene tree)
Gene ID: -
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 6891 bases
Position: chr26:4359768-4366658
Accession: 100225930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000001830	zf-U1	PF06220.12	7.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000001847	SNRPC-201	727	XM_012570994	ENSTGUP00000001830	159 (aa)	XP_012426448	H0YU62

Gene Model

Click here to download ENSTGUG00000001773's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001773's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000001773	SNRPC	99	98.726	ENSG00000124562	SNRPC	100	98.305	Homo_sapiens
ENSTGUG00000001773	SNRPC	99	98.726	ENSAMEG00000000963	SNRPC	87	98.726	Ailuropoda_melanoleuca
ENSTGUG00000001773	SNRPC	99	97.452	ENSACAG00000015721	SNRPC	87	97.452	Anolis_carolinensis
ENSTGUG00000001773	SNRPC	99	90.506	ENSANAG00000020588	-	92	90.506	Aotus_nancymaae
ENSTGUG00000001773	SNRPC	99	85.443	ENSANAG00000021026	-	100	77.987	Aotus_nancymaae
ENSTGUG00000001773	SNRPC	99	87.342	ENSANAG00000019726	-	92	87.421	Aotus_nancymaae
ENSTGUG00000001773	SNRPC	100	73.585	ENSANAG00000021444	-	61	80.208	Aotus_nancymaae
ENSTGUG00000001773	SNRPC	99	93.671	ENSANAG00000019157	-	100	93.082	Aotus_nancymaae
ENSTGUG00000001773	SNRPC	99	98.726	ENSANAG00000019696	-	100	97.484	Aotus_nancymaae
ENSTGUG00000001773	SNRPC	100	96.855	ENSANAG00000007843	-	100	96.855	Aotus_nancymaae
ENSTGUG00000001773	SNRPC	99	84.177	ENSAMXG00000032641	snrpc	87	83.648	Astyanax_mexicanus
ENSTGUG00000001773	SNRPC	100	97.484	ENSBTAG00000024549	SNRPC	100	97.484	Bos_taurus
ENSTGUG00000001773	SNRPC	99	95.570	ENSCJAG00000041822	-	100	94.969	Callithrix_jacchus
ENSTGUG00000001773	SNRPC	99	98.726	ENSCJAG00000015321	-	100	97.484	Callithrix_jacchus
ENSTGUG00000001773	SNRPC	100	96.226	ENSCJAG00000043055	-	100	96.226	Callithrix_jacchus
ENSTGUG00000001773	SNRPC	99	93.671	ENSCAFG00000031775	-	100	93.082	Canis_familiaris
ENSTGUG00000001773	SNRPC	99	77.215	ENSCAFG00000025525	-	100	76.730	Canis_familiaris
ENSTGUG00000001773	SNRPC	74	98.291	ENSCAFG00000001231	-	92	98.291	Canis_familiaris
ENSTGUG00000001773	SNRPC	100	95.000	ENSCAFG00000028988	-	100	95.000	Canis_familiaris
ENSTGUG00000001773	SNRPC	99	93.671	ENSCAFG00020017383	-	100	93.082	Canis_lupus_dingo
ENSTGUG00000001773	SNRPC	99	94.904	ENSCAFG00020005758	-	99	94.904	Canis_lupus_dingo
ENSTGUG00000001773	SNRPC	100	97.484	ENSCAFG00020005945	-	100	97.484	Canis_lupus_dingo
ENSTGUG00000001773	SNRPC	100	86.164	ENSCAFG00020009944	-	91	86.164	Canis_lupus_dingo
ENSTGUG00000001773	SNRPC	99	76.836	ENSCAFG00020026577	-	100	82.584	Canis_lupus_dingo
ENSTGUG00000001773	SNRPC	100	96.855	ENSCHIG00000012087	-	100	96.855	Capra_hircus
ENSTGUG00000001773	SNRPC	99	72.152	ENSCHIG00000005039	-	100	70.440	Capra_hircus
ENSTGUG00000001773	SNRPC	100	97.484	ENSTSYG00000011216	-	100	97.484	Carlito_syrichta
ENSTGUG00000001773	SNRPC	99	87.261	ENSTSYG00000029745	-	62	91.870	Carlito_syrichta
ENSTGUG00000001773	SNRPC	100	81.132	ENSTSYG00000025721	-	100	74.214	Carlito_syrichta
ENSTGUG00000001773	SNRPC	89	98.592	ENSCAPG00000005161	SNRPC	100	98.592	Cavia_aperea
ENSTGUG00000001773	SNRPC	100	97.484	ENSCPOG00000008563	SNRPC	100	97.484	Cavia_porcellus
ENSTGUG00000001773	SNRPC	99	92.405	ENSCCAG00000036059	-	89	91.824	Cebus_capucinus
ENSTGUG00000001773	SNRPC	99	67.722	ENSCCAG00000028293	-	63	87.805	Cebus_capucinus
ENSTGUG00000001773	SNRPC	98	90.385	ENSCCAG00000022751	-	95	90.385	Cebus_capucinus
ENSTGUG00000001773	SNRPC	98	78.846	ENSCCAG00000022209	-	95	78.846	Cebus_capucinus
ENSTGUG00000001773	SNRPC	98	79.487	ENSCCAG00000026624	-	66	73.248	Cebus_capucinus
ENSTGUG00000001773	SNRPC	99	98.726	ENSCATG00000035787	SNRPC	100	97.484	Cercocebus_atys
ENSTGUG00000001773	SNRPC	100	97.484	ENSCLAG00000016920	SNRPC	100	97.484	Chinchilla_lanigera
ENSTGUG00000001773	SNRPC	99	80.892	ENSCLAG00000010242	-	96	80.892	Chinchilla_lanigera
ENSTGUG00000001773	SNRPC	99	77.401	ENSCSAG00000009821	SNRPC	100	83.146	Chlorocebus_sabaeus
ENSTGUG00000001773	SNRPC	100	81.132	ENSCHOG00000011439	SNRPC	88	82.166	Choloepus_hoffmanni
ENSTGUG00000001773	SNRPC	100	96.855	ENSCPBG00000027142	SNRPC	100	96.855	Chrysemys_picta_bellii
ENSTGUG00000001773	SNRPC	96	48.366	ENSCING00000021229	ci-zf(matrin)-4	51	82.258	Ciona_intestinalis
ENSTGUG00000001773	SNRPC	100	97.484	ENSCANG00000028035	SNRPC	100	97.484	Colobus_angolensis_palliatus
ENSTGUG00000001773	SNRPC	100	96.855	ENSCGRG00001009011	-	100	96.855	Cricetulus_griseus_chok1gshd
ENSTGUG00000001773	SNRPC	99	85.443	ENSCGRG00001021483	-	100	83.019	Cricetulus_griseus_chok1gshd
ENSTGUG00000001773	SNRPC	99	98.089	ENSCGRG00000005005	Snrpc	99	98.089	Cricetulus_griseus_crigri
ENSTGUG00000001773	SNRPC	99	84.177	ENSDARG00000009871	snrpc	100	83.648	Danio_rerio
ENSTGUG00000001773	SNRPC	100	96.226	ENSDNOG00000034699	-	99	96.226	Dasypus_novemcinctus
ENSTGUG00000001773	SNRPC	74	97.458	ENSDNOG00000042403	-	94	97.458	Dasypus_novemcinctus
ENSTGUG00000001773	SNRPC	94	77.333	ENSDORG00000029823	-	55	93.421	Dipodomys_ordii
ENSTGUG00000001773	SNRPC	100	80.503	ENSDORG00000005955	Snrpc	66	79.618	Dipodomys_ordii
ENSTGUG00000001773	SNRPC	97	94.194	ENSETEG00000008268	-	100	93.590	Echinops_telfairi
ENSTGUG00000001773	SNRPC	97	90.323	ENSETEG00000011265	-	100	89.744	Echinops_telfairi
ENSTGUG00000001773	SNRPC	52	95.181	ENSETEG00000008756	-	81	95.181	Echinops_telfairi
ENSTGUG00000001773	SNRPC	100	97.484	ENSEASG00005021007	SNRPC	100	97.484	Equus_asinus_asinus
ENSTGUG00000001773	SNRPC	100	97.484	ENSECAG00000026848	SNRPC	100	97.484	Equus_caballus
ENSTGUG00000001773	SNRPC	99	79.747	ENSEEUG00000014633	SNRPC	90	79.747	Erinaceus_europaeus
ENSTGUG00000001773	SNRPC	99	98.726	ENSFCAG00000044077	-	100	97.484	Felis_catus
ENSTGUG00000001773	SNRPC	99	91.139	ENSFCAG00000031775	-	72	96.748	Felis_catus
ENSTGUG00000001773	SNRPC	100	98.742	ENSFALG00000003756	SNRPC	100	98.742	Ficedula_albicollis
ENSTGUG00000001773	SNRPC	100	97.484	ENSFDAG00000018111	SNRPC	100	97.484	Fukomys_damarensis
ENSTGUG00000001773	SNRPC	100	96.875	ENSGALG00000002773	SNRPC	100	96.875	Gallus_gallus
ENSTGUG00000001773	SNRPC	100	96.855	ENSGAGG00000003063	SNRPC	100	96.855	Gopherus_agassizii
ENSTGUG00000001773	SNRPC	100	97.484	ENSGGOG00000012499	SNRPC	100	97.484	Gorilla_gorilla
ENSTGUG00000001773	SNRPC	81	73.643	ENSHGLG00000005871	-	100	73.585	Heterocephalus_glaber_female
ENSTGUG00000001773	SNRPC	99	79.747	ENSHGLG00000017741	-	100	76.730	Heterocephalus_glaber_female
ENSTGUG00000001773	SNRPC	100	97.484	ENSHGLG00000013981	SNRPC	99	98.718	Heterocephalus_glaber_female
ENSTGUG00000001773	SNRPC	99	79.747	ENSHGLG00100010786	-	100	76.730	Heterocephalus_glaber_male
ENSTGUG00000001773	SNRPC	100	97.484	ENSHGLG00100009478	SNRPC	99	98.718	Heterocephalus_glaber_male
ENSTGUG00000001773	SNRPC	100	92.453	ENSHGLG00100017764	-	100	92.453	Heterocephalus_glaber_male
ENSTGUG00000001773	SNRPC	99	84.810	ENSIPUG00000024851	snrpc	100	84.277	Ictalurus_punctatus
ENSTGUG00000001773	SNRPC	100	97.484	ENSSTOG00000013786	SNRPC	100	97.484	Ictidomys_tridecemlineatus
ENSTGUG00000001773	SNRPC	100	96.855	ENSJJAG00000021741	Snrpc	100	96.855	Jaculus_jaculus
ENSTGUG00000001773	SNRPC	99	88.050	ENSLACG00000013753	SNRPC	88	90.506	Latimeria_chalumnae
ENSTGUG00000001773	SNRPC	100	97.484	ENSLAFG00000013534	SNRPC	100	97.484	Loxodonta_africana
ENSTGUG00000001773	SNRPC	100	97.484	ENSMFAG00000031764	-	100	97.484	Macaca_fascicularis
ENSTGUG00000001773	SNRPC	100	96.855	ENSMFAG00000030525	-	100	96.855	Macaca_fascicularis
ENSTGUG00000001773	SNRPC	99	87.975	ENSMMUG00000045425	-	100	87.421	Macaca_mulatta
ENSTGUG00000001773	SNRPC	98	98.718	ENSMMUG00000000869	-	95	98.718	Macaca_mulatta
ENSTGUG00000001773	SNRPC	100	96.226	ENSMMUG00000039415	-	100	96.226	Macaca_mulatta
ENSTGUG00000001773	SNRPC	99	98.726	ENSMNEG00000032731	SNRPC	100	97.484	Macaca_nemestrina
ENSTGUG00000001773	SNRPC	99	98.726	ENSMLEG00000033916	-	100	97.484	Mandrillus_leucophaeus
ENSTGUG00000001773	SNRPC	97	90.323	ENSMLEG00000040224	-	89	90.323	Mandrillus_leucophaeus
ENSTGUG00000001773	SNRPC	100	96.855	ENSMGAG00000006054	SNRPC	100	96.855	Meleagris_gallopavo
ENSTGUG00000001773	SNRPC	98	85.256	ENSMICG00000036552	-	87	78.846	Microcebus_murinus
ENSTGUG00000001773	SNRPC	99	86.076	ENSMICG00000009130	-	100	86.164	Microcebus_murinus
ENSTGUG00000001773	SNRPC	100	96.855	ENSMICG00000007339	-	100	96.855	Microcebus_murinus
ENSTGUG00000001773	SNRPC	100	96.855	ENSMICG00000032183	-	100	96.855	Microcebus_murinus
ENSTGUG00000001773	SNRPC	100	96.855	ENSMOCG00000017609	Snrpc	100	96.855	Microtus_ochrogaster
ENSTGUG00000001773	SNRPC	100	96.226	ENSMODG00000013904	-	100	96.226	Monodelphis_domestica
ENSTGUG00000001773	SNRPC	100	96.855	MGP_CAROLIEiJ_G0021308	Snrpc	100	96.855	Mus_caroli
ENSTGUG00000001773	SNRPC	100	96.855	ENSMUSG00000024217	Snrpc	100	96.855	Mus_musculus
ENSTGUG00000001773	SNRPC	74	97.436	MGP_SPRETEiJ_G0022221	-	98	97.436	Mus_spretus
ENSTGUG00000001773	SNRPC	99	98.726	ENSMPUG00000003210	SNRPC	99	98.726	Mustela_putorius_furo
ENSTGUG00000001773	SNRPC	99	98.726	ENSMLUG00000002488	SNRPC	99	98.726	Myotis_lucifugus
ENSTGUG00000001773	SNRPC	100	96.855	ENSNGAG00000019686	Snrpc	100	96.855	Nannospalax_galili
ENSTGUG00000001773	SNRPC	99	98.726	ENSNLEG00000034810	SNRPC	100	97.484	Nomascus_leucogenys
ENSTGUG00000001773	SNRPC	89	97.887	ENSMEUG00000009300	SNRPC	100	97.887	Notamacropus_eugenii
ENSTGUG00000001773	SNRPC	100	96.226	ENSODEG00000019633	-	100	96.226	Octodon_degus
ENSTGUG00000001773	SNRPC	77	92.623	ENSODEG00000006008	-	88	91.870	Octodon_degus
ENSTGUG00000001773	SNRPC	100	96.855	ENSODEG00000020201	-	100	96.855	Octodon_degus
ENSTGUG00000001773	SNRPC	100	97.484	ENSODEG00000017080	-	100	97.484	Octodon_degus
ENSTGUG00000001773	SNRPC	100	97.484	ENSODEG00000018985	-	100	97.484	Octodon_degus
ENSTGUG00000001773	SNRPC	100	97.484	ENSODEG00000020370	-	100	97.484	Octodon_degus
ENSTGUG00000001773	SNRPC	91	93.919	ENSOANG00000003405	SNRPC	100	93.919	Ornithorhynchus_anatinus
ENSTGUG00000001773	SNRPC	99	95.570	ENSOCUG00000023292	-	100	94.969	Oryctolagus_cuniculus
ENSTGUG00000001773	SNRPC	100	97.484	ENSOCUG00000026668	-	100	97.484	Oryctolagus_cuniculus
ENSTGUG00000001773	SNRPC	100	96.226	ENSOCUG00000026430	-	99	96.226	Oryctolagus_cuniculus
ENSTGUG00000001773	SNRPC	97	83.117	ENSOGAG00000028405	-	99	80.519	Otolemur_garnettii
ENSTGUG00000001773	SNRPC	100	98.113	ENSOGAG00000008755	-	89	98.113	Otolemur_garnettii
ENSTGUG00000001773	SNRPC	99	96.203	ENSOGAG00000026269	-	100	95.597	Otolemur_garnettii
ENSTGUG00000001773	SNRPC	100	97.484	ENSOARG00000010823	SNRPC	100	97.484	Ovis_aries
ENSTGUG00000001773	SNRPC	100	97.484	ENSPPAG00000043871	SNRPC	100	97.484	Pan_paniscus
ENSTGUG00000001773	SNRPC	99	98.726	ENSPPRG00000008647	-	100	97.484	Panthera_pardus
ENSTGUG00000001773	SNRPC	96	59.091	ENSPPRG00000016017	-	86	53.595	Panthera_pardus
ENSTGUG00000001773	SNRPC	99	98.726	ENSPTIG00000021867	-	100	97.484	Panthera_tigris_altaica
ENSTGUG00000001773	SNRPC	100	97.484	ENSPTRG00000018070	SNRPC	100	97.484	Pan_troglodytes
ENSTGUG00000001773	SNRPC	99	98.726	ENSPANG00000022802	-	100	97.484	Papio_anubis
ENSTGUG00000001773	SNRPC	100	86.164	ENSPANG00000018228	-	94	86.164	Papio_anubis
ENSTGUG00000001773	SNRPC	99	97.452	ENSPSIG00000004876	SNRPC	77	97.452	Pelodiscus_sinensis
ENSTGUG00000001773	SNRPC	100	96.855	ENSPEMG00000010773	Snrpc	100	96.855	Peromyscus_maniculatus_bairdii
ENSTGUG00000001773	SNRPC	99	85.443	ENSPEMG00000002763	-	100	83.019	Peromyscus_maniculatus_bairdii
ENSTGUG00000001773	SNRPC	52	97.561	ENSPPYG00000029902	-	83	97.561	Pongo_abelii
ENSTGUG00000001773	SNRPC	100	98.113	ENSPCAG00000016885	SNRPC	91	98.113	Procavia_capensis
ENSTGUG00000001773	SNRPC	99	98.726	ENSPCOG00000004904	SNRPC	100	97.484	Propithecus_coquereli
ENSTGUG00000001773	SNRPC	99	98.089	ENSPVAG00000015597	SNRPC	87	98.089	Pteropus_vampyrus
ENSTGUG00000001773	SNRPC	100	96.855	ENSRNOG00000000493	Snrpc	100	96.855	Rattus_norvegicus
ENSTGUG00000001773	SNRPC	100	96.855	ENSRBIG00000022998	-	100	96.855	Rhinopithecus_bieti
ENSTGUG00000001773	SNRPC	100	96.855	ENSRBIG00000014819	-	100	96.855	Rhinopithecus_bieti
ENSTGUG00000001773	SNRPC	99	98.726	ENSRBIG00000037567	-	100	97.484	Rhinopithecus_bieti
ENSTGUG00000001773	SNRPC	99	87.975	ENSRBIG00000036353	-	83	87.421	Rhinopithecus_bieti
ENSTGUG00000001773	SNRPC	99	98.726	ENSRROG00000041300	SNRPC	100	97.484	Rhinopithecus_roxellana
ENSTGUG00000001773	SNRPC	98	80.128	ENSSBOG00000032882	-	93	80.128	Saimiri_boliviensis_boliviensis
ENSTGUG00000001773	SNRPC	99	98.726	ENSSBOG00000031528	-	100	97.484	Saimiri_boliviensis_boliviensis
ENSTGUG00000001773	SNRPC	94	81.333	ENSSBOG00000032361	-	75	81.967	Saimiri_boliviensis_boliviensis
ENSTGUG00000001773	SNRPC	98	80.128	ENSSBOG00000023189	-	91	80.128	Saimiri_boliviensis_boliviensis
ENSTGUG00000001773	SNRPC	99	98.089	ENSSHAG00000000945	-	87	98.089	Sarcophilus_harrisii
ENSTGUG00000001773	SNRPC	100	75.472	ENSSARG00000008970	SNRPC	89	75.472	Sorex_araneus
ENSTGUG00000001773	SNRPC	100	96.855	ENSSPUG00000002502	SNRPC	100	96.855	Sphenodon_punctatus
ENSTGUG00000001773	SNRPC	100	97.484	ENSSSCG00000001531	SNRPC	100	97.484	Sus_scrofa
ENSTGUG00000001773	SNRPC	89	71.831	ENSTBEG00000016759	-	79	71.831	Tupaia_belangeri
ENSTGUG00000001773	SNRPC	97	71.613	ENSTBEG00000015356	-	68	88.542	Tupaia_belangeri
ENSTGUG00000001773	SNRPC	97	90.323	ENSTBEG00000013022	-	100	89.744	Tupaia_belangeri
ENSTGUG00000001773	SNRPC	99	98.726	ENSTTRG00000007827	SNRPC	86	98.726	Tursiops_truncatus
ENSTGUG00000001773	SNRPC	74	97.458	ENSUAMG00000014125	SNRPC	80	97.458	Ursus_americanus
ENSTGUG00000001773	SNRPC	100	87.079	ENSUMAG00000010869	SNRPC	100	87.079	Ursus_maritimus
ENSTGUG00000001773	SNRPC	89	73.239	ENSVPAG00000003106	SNRPC	79	73.239	Vicugna_pacos
ENSTGUG00000001773	SNRPC	100	96.226	ENSVVUG00000021947	-	100	96.226	Vulpes_vulpes
ENSTGUG00000001773	SNRPC	97	93.506	ENSVVUG00000010467	-	87	93.590	Vulpes_vulpes
ENSTGUG00000001773	SNRPC	99	89.241	ENSXETG00000024721	snrpc	100	88.679	Xenopus_tropicalis