EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTGUG00000001920 (Gene tree)
Gene ID
100230550
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Taeniopygia_guttata
Status
putative
Strand
Minus strand
Length
55846 bases
Position
chr4:4900805-4956650
Accession
100230550
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71112
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71212
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71312
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71412
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71512
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71612
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71712
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71812
ENSTGUP00000001982zf-C2H2PF00096.266.8e-71912
ENSTGUP00000001982zf-C2H2PF00096.266.8e-711012
ENSTGUP00000001982zf-C2H2PF00096.266.8e-711112
ENSTGUP00000001982zf-C2H2PF00096.266.8e-711212
ENSTGUP00000001982zf-metPF12874.71.5e-3116
ENSTGUP00000001982zf-metPF12874.71.5e-3126
ENSTGUP00000001982zf-metPF12874.71.5e-3136
ENSTGUP00000001982zf-metPF12874.71.5e-3146
ENSTGUP00000001982zf-metPF12874.71.5e-3156
ENSTGUP00000001982zf-metPF12874.71.5e-3166
ENSTGUP00000001982zf-C2H2_jazPF12171.89e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTGUT00000002000PRDM5-2011800XM_002187833ENSTGUP00000001982599 (aa)XP_002187869H0YUL3
Gene Model
Click here to download ENSTGUG00000001920's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001920's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTGUG00000001920PRDM57739.506ENSTGUG00000010006ZNF71010039.506
ENSTGUG00000001920PRDM55943.750ENSTGUG00000018518-10043.750
ENSTGUG00000001920PRDM58237.168ENSTGUG00000012603ZFAT5137.168
ENSTGUG00000001920PRDM57841.434ENSTGUG00000016850-9941.434
ENSTGUG00000001920PRDM57842.574ENSTGUG00000013736-10042.574
ENSTGUG00000001920PRDM57741.304ENSTGUG00000005282-10041.304
ENSTGUG00000001920PRDM57734.383ENSTGUG00000004796ZNF3199334.383
ENSTGUG00000001920PRDM56141.304ENSTGUG00000008724SNAI17941.007
ENSTGUG00000001920PRDM57638.519ENSTGUG00000006801SCRT26138.406
ENSTGUG00000001920PRDM57841.629ENSTGUG00000016516-10041.629
ENSTGUG00000001920PRDM57540.268ENSTGUG00000015549-10040.268
ENSTGUG00000001920PRDM57841.611ENSTGUG00000018327-10041.611
ENSTGUG00000001920PRDM57643.262ENSTGUG00000018254-9943.262
ENSTGUG00000001920PRDM58145.614ENSTGUG00000009074ZNF2366938.525
ENSTGUG00000001920PRDM57139.474ENSTGUG00000015149-8139.474
ENSTGUG00000001920PRDM57842.795ENSTGUG00000014292-9942.241
ENSTGUG00000001920PRDM57843.151ENSTGUG00000014614-9943.151
ENSTGUG00000001920PRDM57838.318ENSTGUG00000010575ZNF5219638.318
ENSTGUG00000001920PRDM57844.304ENSTGUG00000018385-10044.304
ENSTGUG00000001920PRDM57845.270ENSTGUG00000015210-9945.270
ENSTGUG00000001920PRDM57740.000ENSTGUG00000005909OVOL25440.000
ENSTGUG00000001920PRDM57732.051ENSTGUG00000000530PRDM105335.652
ENSTGUG00000001920PRDM57040.854ENSTGUG00000015260-10040.854
ENSTGUG00000001920PRDM56546.729ENSTGUG00000018349-10046.729
ENSTGUG00000001920PRDM55650.000ENSTGUG00000018542-10050.000
ENSTGUG00000001920PRDM57645.714ENSTGUG00000018351-9945.714
ENSTGUG00000001920PRDM57841.477ENSTGUG00000006060GFI15241.477
ENSTGUG00000001920PRDM57843.158ENSTGUG00000018445-9743.158
ENSTGUG00000001920PRDM57936.822ENSTGUG00000017059-9936.822
ENSTGUG00000001920PRDM57839.630ENSTGUG00000016781-10039.630
ENSTGUG00000001920PRDM57140.909ENSTGUG00000018374-9940.690
ENSTGUG00000001920PRDM57732.271ENSTGUG00000000272ZBTB475132.143
ENSTGUG00000001920PRDM57840.805ENSTGUG00000014888-9940.805
ENSTGUG00000001920PRDM57835.853ENSTGUG00000014079-10040.141
ENSTGUG00000001920PRDM57840.357ENSTGUG00000016220-10040.357
ENSTGUG00000001920PRDM57840.404ENSTGUG00000015090-9940.404
ENSTGUG00000001920PRDM55146.250ENSTGUG00000016690-9446.250
ENSTGUG00000001920PRDM57731.774ENSTGUG00000007503GZF19933.721
ENSTGUG00000001920PRDM56042.222ENSTGUG00000010914-5241.606
ENSTGUG00000001920PRDM57735.664ENSTGUG00000002589ZBTB486335.943
ENSTGUG00000001920PRDM57243.662ENSTGUG00000018439-10043.662
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTGUG00000001920PRDM510084.641ENSG00000138738PRDM59584.641Homo_sapiens
ENSTGUG00000001920PRDM510081.833ENSAPOG00000023220prdm59581.667Acanthochromis_polyacanthus
ENSTGUG00000001920PRDM59678.510ENSAMEG00000003050PRDM510079.514Ailuropoda_melanoleuca
ENSTGUG00000001920PRDM510080.167ENSACIG00000000406prdm59580.833Amphilophus_citrinellus
ENSTGUG00000001920PRDM510083.000ENSAOCG00000014806prdm59582.167Amphiprion_ocellaris
ENSTGUG00000001920PRDM510073.430ENSAPEG00000016846prdm59573.913Amphiprion_percula
ENSTGUG00000001920PRDM510085.167ENSATEG00000013829prdm59585.167Anabas_testudineus
ENSTGUG00000001920PRDM510096.346ENSAPLG00000013828PRDM510096.346Anas_platyrhynchos
ENSTGUG00000001920PRDM510088.982ENSACAG00000012999PRDM59588.982Anolis_carolinensis
ENSTGUG00000001920PRDM510089.873ENSANAG00000027411PRDM59389.873Aotus_nancymaae
ENSTGUG00000001920PRDM510082.500ENSACLG00000017996prdm59583.000Astatotilapia_calliptera
ENSTGUG00000001920PRDM58983.240ENSAMXG00000041864prdm59982.868Astyanax_mexicanus
ENSTGUG00000001920PRDM510083.806ENSBTAG00000012111PRDM59583.806Bos_taurus
ENSTGUG00000001920PRDM510089.873ENSCJAG00000003133PRDM59389.873Callithrix_jacchus
ENSTGUG00000001920PRDM59676.166ENSCAFG00000004179PRDM59976.166Canis_familiaris
ENSTGUG00000001920PRDM510083.973ENSCAFG00020017685PRDM59583.973Canis_lupus_dingo
ENSTGUG00000001920PRDM510083.639ENSCHIG00000018772PRDM59583.639Capra_hircus
ENSTGUG00000001920PRDM59984.220ENSTSYG00000009630PRDM59584.220Carlito_syrichta
ENSTGUG00000001920PRDM59589.333ENSCAPG00000015217PRDM510089.333Cavia_aperea
ENSTGUG00000001920PRDM510089.557ENSCPOG00000012883PRDM510089.557Cavia_porcellus
ENSTGUG00000001920PRDM510090.190ENSCCAG00000023157PRDM59390.190Cebus_capucinus
ENSTGUG00000001920PRDM510090.190ENSCATG00000042510PRDM59390.190Cercocebus_atys
ENSTGUG00000001920PRDM510089.241ENSCLAG00000005392PRDM510089.333Chinchilla_lanigera
ENSTGUG00000001920PRDM510081.135ENSCSAG00000003729PRDM59581.135Chlorocebus_sabaeus
ENSTGUG00000001920PRDM510079.720ENSCHOG00000007801PRDM58679.720Choloepus_hoffmanni
ENSTGUG00000001920PRDM510093.257ENSCPBG00000024735PRDM59593.421Chrysemys_picta_bellii
ENSTGUG00000001920PRDM510090.190ENSCANG00000036807PRDM59390.190Colobus_angolensis_palliatus
ENSTGUG00000001920PRDM510089.873ENSCGRG00001010581Prdm59389.873Cricetulus_griseus_chok1gshd
ENSTGUG00000001920PRDM510073.167ENSCGRG00000010996-9973.167Cricetulus_griseus_crigri
ENSTGUG00000001920PRDM510082.167ENSCSEG00000019979prdm59581.833Cynoglossus_semilaevis
ENSTGUG00000001920PRDM510080.833ENSCVAG00000013692prdm59580.000Cyprinodon_variegatus
ENSTGUG00000001920PRDM510083.389ENSDARG00000006288prdm59583.389Danio_rerio
ENSTGUG00000001920PRDM59684.000ENSDNOG00000002009PRDM510084.000Dasypus_novemcinctus
ENSTGUG00000001920PRDM510088.608ENSDORG00000007739Prdm59388.608Dipodomys_ordii
ENSTGUG00000001920PRDM59681.579ENSETEG00000020268PRDM58881.579Echinops_telfairi
ENSTGUG00000001920PRDM59971.739ENSEBUG00000004301prdm59571.739Eptatretus_burgeri
ENSTGUG00000001920PRDM510090.506ENSEASG00005018365PRDM59390.506Equus_asinus_asinus
ENSTGUG00000001920PRDM59982.846ENSECAG00000011516PRDM58582.846Equus_caballus
ENSTGUG00000001920PRDM510068.519ENSECAG00000024747-9278.193Equus_caballus
ENSTGUG00000001920PRDM59977.798ENSEEUG00000010306PRDM59577.798Erinaceus_europaeus
ENSTGUG00000001920PRDM59983.236ENSELUG00000005894prdm58783.236Esox_lucius
ENSTGUG00000001920PRDM510083.973ENSFCAG00000025656PRDM59583.973Felis_catus
ENSTGUG00000001920PRDM59994.138ENSFALG00000008381PRDM59094.138Ficedula_albicollis
ENSTGUG00000001920PRDM510089.557ENSFDAG00000021361PRDM59389.557Fukomys_damarensis
ENSTGUG00000001920PRDM510082.833ENSFHEG00000013040prdm59583.333Fundulus_heteroclitus
ENSTGUG00000001920PRDM59676.316ENSGMOG00000012038prdm58876.316Gadus_morhua
ENSTGUG00000001920PRDM510095.847ENSGALG00000011963PRDM59595.847Gallus_gallus
ENSTGUG00000001920PRDM59984.540ENSGAFG00000019233prdm59579.000Gambusia_affinis
ENSTGUG00000001920PRDM59990.835ENSGAGG00000020362PRDM59391.242Gopherus_agassizii
ENSTGUG00000001920PRDM510090.190ENSGGOG00000013562PRDM59390.190Gorilla_gorilla
ENSTGUG00000001920PRDM510082.000ENSHBUG00000023375prdm59581.000Haplochromis_burtoni
ENSTGUG00000001920PRDM510075.633ENSHGLG00000003010PRDM59281.329Heterocephalus_glaber_female
ENSTGUG00000001920PRDM510089.873ENSHGLG00100003696PRDM59389.873Heterocephalus_glaber_male
ENSTGUG00000001920PRDM510084.859ENSHCOG00000012131prdm59584.859Hippocampus_comes
ENSTGUG00000001920PRDM510084.526ENSIPUG00000001248prdm59584.692Ictalurus_punctatus
ENSTGUG00000001920PRDM510087.658ENSSTOG00000004741PRDM510088.000Ictidomys_tridecemlineatus
ENSTGUG00000001920PRDM510089.241ENSJJAG00000011464Prdm510089.241Jaculus_jaculus
ENSTGUG00000001920PRDM510082.833ENSKMAG00000013663prdm59582.833Kryptolebias_marmoratus
ENSTGUG00000001920PRDM510085.500ENSLBEG00000022736prdm59585.500Labrus_bergylta
ENSTGUG00000001920PRDM59691.667ENSLACG00000009187PRDM59991.667Latimeria_chalumnae
ENSTGUG00000001920PRDM510088.147ENSLOCG00000009778prdm59588.147Lepisosteus_oculatus
ENSTGUG00000001920PRDM510080.801ENSLAFG00000006532PRDM59984.494Loxodonta_africana
ENSTGUG00000001920PRDM510090.190ENSMFAG00000045845PRDM59390.190Macaca_fascicularis
ENSTGUG00000001920PRDM510090.190ENSMMUG00000003249PRDM59390.190Macaca_mulatta
ENSTGUG00000001920PRDM510090.190ENSMNEG00000019018PRDM59390.190Macaca_nemestrina
ENSTGUG00000001920PRDM510084.474ENSMLEG00000023145PRDM510084.474Mandrillus_leucophaeus
ENSTGUG00000001920PRDM510083.667ENSMAMG00000013419prdm59583.667Mastacembelus_armatus
ENSTGUG00000001920PRDM510082.000ENSMZEG00005020645prdm59581.000Maylandia_zebra
ENSTGUG00000001920PRDM510096.013ENSMGAG00000010710PRDM510096.013Meleagris_gallopavo
ENSTGUG00000001920PRDM510089.873ENSMAUG00000006768Prdm59389.873Mesocricetus_auratus
ENSTGUG00000001920PRDM510089.557ENSMICG00000001459PRDM59389.557Microcebus_murinus
ENSTGUG00000001920PRDM510089.873ENSMOCG00000016267Prdm59389.873Microtus_ochrogaster
ENSTGUG00000001920PRDM510082.833ENSMMOG00000006035prdm59582.833Mola_mola
ENSTGUG00000001920PRDM510085.857ENSMODG00000018942PRDM59585.857Monodelphis_domestica
ENSTGUG00000001920PRDM510079.167ENSMALG00000013934prdm59578.667Monopterus_albus
ENSTGUG00000001920PRDM510089.557MGP_CAROLIEiJ_G0028463Prdm59389.557Mus_caroli
ENSTGUG00000001920PRDM510089.241ENSMUSG00000029913Prdm59389.241Mus_musculus
ENSTGUG00000001920PRDM510089.557MGP_PahariEiJ_G0022203Prdm59389.557Mus_pahari
ENSTGUG00000001920PRDM510089.241MGP_SPRETEiJ_G0029467Prdm59389.241Mus_spretus
ENSTGUG00000001920PRDM510083.472ENSMPUG00000017415PRDM59583.472Mustela_putorius_furo
ENSTGUG00000001920PRDM59676.817ENSMLUG00000006097PRDM510076.817Myotis_lucifugus
ENSTGUG00000001920PRDM510089.873ENSNGAG00000018317Prdm59389.873Nannospalax_galili
ENSTGUG00000001920PRDM510073.235ENSNBRG00000004976prdm59578.738Neolamprologus_brichardi
ENSTGUG00000001920PRDM510090.190ENSNLEG00000009107PRDM59390.190Nomascus_leucogenys
ENSTGUG00000001920PRDM58382.906ENSMEUG00000006576-6682.906Notamacropus_eugenii
ENSTGUG00000001920PRDM510065.073ENSOPRG00000011066-8965.073Ochotona_princeps
ENSTGUG00000001920PRDM510089.557ENSODEG00000009133PRDM59389.557Octodon_degus
ENSTGUG00000001920PRDM510085.025ENSONIG00000003111prdm59585.500Oreochromis_niloticus
ENSTGUG00000001920PRDM59981.893ENSOANG00000015109PRDM59180.282Ornithorhynchus_anatinus
ENSTGUG00000001920PRDM57298.889ENSOANG00000006197-10098.889Ornithorhynchus_anatinus
ENSTGUG00000001920PRDM59877.342ENSOCUG00000013454PRDM510078.535Oryctolagus_cuniculus
ENSTGUG00000001920PRDM510081.500ENSORLG00000016247prdm59581.333Oryzias_latipes
ENSTGUG00000001920PRDM510081.833ENSORLG00020018051prdm59580.865Oryzias_latipes_hni
ENSTGUG00000001920PRDM510081.500ENSORLG00015013760prdm59581.333Oryzias_latipes_hsok
ENSTGUG00000001920PRDM510081.864ENSOMEG00000005143prdm59582.363Oryzias_melastigma
ENSTGUG00000001920PRDM58976.460ENSOGAG00000009996PRDM59876.075Otolemur_garnettii
ENSTGUG00000001920PRDM59983.242ENSOARG00000015473PRDM510082.495Ovis_aries
ENSTGUG00000001920PRDM510084.641ENSPPAG00000043045PRDM510084.327Pan_paniscus
ENSTGUG00000001920PRDM510083.973ENSPPRG00000001020PRDM59583.973Panthera_pardus
ENSTGUG00000001920PRDM510083.806ENSPTIG00000010807PRDM59583.806Panthera_tigris_altaica
ENSTGUG00000001920PRDM510090.190ENSPTRG00000016403PRDM59390.190Pan_troglodytes
ENSTGUG00000001920PRDM510090.190ENSPANG00000023612PRDM59390.190Papio_anubis
ENSTGUG00000001920PRDM510055.263ENSPKIG00000015492prdm59459.567Paramormyrops_kingsleyae
ENSTGUG00000001920PRDM510093.355ENSPSIG00000013505PRDM59593.688Pelodiscus_sinensis
ENSTGUG00000001920PRDM510080.500ENSPMGG00000012622prdm59579.333Periophthalmus_magnuspinnatus
ENSTGUG00000001920PRDM57774.757ENSPMAG00000005248prdm510075.728Petromyzon_marinus
ENSTGUG00000001920PRDM59875.394ENSPFOG00000018630prdm59174.599Poecilia_formosa
ENSTGUG00000001920PRDM510085.000ENSPLAG00000014148prdm59585.667Poecilia_latipinna
ENSTGUG00000001920PRDM510083.000ENSPMEG00000018002prdm59583.667Poecilia_mexicana
ENSTGUG00000001920PRDM510083.000ENSPREG00000018366prdm59583.667Poecilia_reticulata
ENSTGUG00000001920PRDM510084.641ENSPPYG00000015031PRDM59584.641Pongo_abelii
ENSTGUG00000001920PRDM510078.297ENSPCAG00000011671PRDM510078.297Procavia_capensis
ENSTGUG00000001920PRDM510089.557ENSPCOG00000022828PRDM59389.557Propithecus_coquereli
ENSTGUG00000001920PRDM510079.800ENSPVAG00000012309PRDM510079.800Pteropus_vampyrus
ENSTGUG00000001920PRDM510082.500ENSPNYG00000012194prdm59583.000Pundamilia_nyererei
ENSTGUG00000001920PRDM510081.667ENSPNAG00000026181prdm59582.167Pygocentrus_nattereri
ENSTGUG00000001920PRDM59880.136ENSPNAG00000023191-10080.136Pygocentrus_nattereri
ENSTGUG00000001920PRDM59976.481ENSRNOG00000023679Prdm59476.481Rattus_norvegicus
ENSTGUG00000001920PRDM510090.190ENSRBIG00000041307PRDM59390.190Rhinopithecus_bieti
ENSTGUG00000001920PRDM59969.063ENSRROG00000035343PRDM510076.461Rhinopithecus_roxellana
ENSTGUG00000001920PRDM510090.190ENSSBOG00000022100PRDM59390.190Saimiri_boliviensis_boliviensis
ENSTGUG00000001920PRDM59583.811ENSSHAG00000003250PRDM510084.016Sarcophilus_harrisii
ENSTGUG00000001920PRDM510080.167ENSSFOG00015020478prdm59579.236Scleropages_formosus
ENSTGUG00000001920PRDM510085.667ENSSMAG00000018844prdm59585.667Scophthalmus_maximus
ENSTGUG00000001920PRDM59984.149ENSSDUG00000020397prdm59583.000Seriola_dumerili
ENSTGUG00000001920PRDM59985.009ENSSLDG00000013353prdm59583.000Seriola_lalandi_dorsalis
ENSTGUG00000001920PRDM510090.598ENSSARG00000014129-8090.598Sorex_araneus
ENSTGUG00000001920PRDM510098.101ENSSPUG00000009941PRDM59398.101Sphenodon_punctatus
ENSTGUG00000001920PRDM510085.667ENSSPAG00000013866prdm59584.500Stegastes_partitus
ENSTGUG00000001920PRDM510084.140ENSSSCG00000009101PRDM59584.140Sus_scrofa
ENSTGUG00000001920PRDM510081.500ENSTRUG00000013850prdm59581.500Takifugu_rubripes
ENSTGUG00000001920PRDM510068.552ENSTNIG00000005901prdm59568.552Tetraodon_nigroviridis
ENSTGUG00000001920PRDM510078.356ENSTBEG00000015386PRDM58678.356Tupaia_belangeri
ENSTGUG00000001920PRDM510083.306ENSTTRG00000010996PRDM59583.306Tursiops_truncatus
ENSTGUG00000001920PRDM59989.316ENSUAMG00000009994PRDM57789.316Ursus_americanus
ENSTGUG00000001920PRDM510090.506ENSUMAG00000003733PRDM59990.506Ursus_maritimus
ENSTGUG00000001920PRDM510074.290ENSVPAG00000007435PRDM59874.290Vicugna_pacos
ENSTGUG00000001920PRDM59883.816ENSVVUG00000013192PRDM510083.816Vulpes_vulpes
ENSTGUG00000001920PRDM510085.667ENSXETG00000002101prdm59585.667Xenopus_tropicalis
ENSTGUG00000001920PRDM510083.333ENSXCOG00000008567prdm59583.333Xiphophorus_couchianus
ENSTGUG00000001920PRDM59984.344ENSXMAG00000013825prdm59583.333Xiphophorus_maculatus

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