EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000001931 (Gene tree)
Gene ID: -
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 12960 bases
Position: chr27:383542-396501
Accession: 18676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000001990	ResIII	PF04851.15	7e-07	1	1
ENSTGUP00000001990	DEAD	PF00270.29	5.4e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002008	DDX42-201	2802	-	ENSTGUP00000001990	933 (aa)	-	H0YUM1

Gene Model

Click here to download ENSTGUG00000001931's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000001931's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000001931	DDX42	58	38.869	ENSTGUG00000010391	DDX17	86	39.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000001931	DDX42	100	83.177	ENSG00000198231	DDX42	99	90.793	Homo_sapiens
ENSTGUG00000001931	DDX42	87	77.119	ENSAPOG00000017675	ddx42	99	73.192	Acanthochromis_polyacanthus
ENSTGUG00000001931	DDX42	100	83.718	ENSAMEG00000003200	DDX42	100	83.718	Ailuropoda_melanoleuca
ENSTGUG00000001931	DDX42	84	72.040	ENSACIG00000007376	ddx42	99	73.426	Amphilophus_citrinellus
ENSTGUG00000001931	DDX42	87	77.455	ENSAOCG00000003520	ddx42	99	71.489	Amphiprion_ocellaris
ENSTGUG00000001931	DDX42	100	70.052	ENSAPEG00000000984	ddx42	99	71.595	Amphiprion_percula
ENSTGUG00000001931	DDX42	99	70.794	ENSATEG00000022920	ddx42	99	72.169	Anabas_testudineus
ENSTGUG00000001931	DDX42	100	92.242	ENSAPLG00000010544	DDX42	100	92.455	Anas_platyrhynchos
ENSTGUG00000001931	DDX42	100	84.322	ENSACAG00000003994	DDX42	99	84.105	Anolis_carolinensis
ENSTGUG00000001931	DDX42	100	83.560	ENSANAG00000035693	DDX42	99	90.043	Aotus_nancymaae
ENSTGUG00000001931	DDX42	90	76.505	ENSACLG00000025113	ddx42	99	73.433	Astatotilapia_calliptera
ENSTGUG00000001931	DDX42	78	81.096	ENSAMXG00000011435	ddx42	99	69.731	Astyanax_mexicanus
ENSTGUG00000001931	DDX42	100	82.733	ENSBTAG00000021058	DDX42	98	89.700	Bos_taurus
ENSTGUG00000001931	DDX42	64	52.830	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSTGUG00000001931	DDX42	100	83.560	ENSCJAG00000019649	DDX42	99	93.014	Callithrix_jacchus
ENSTGUG00000001931	DDX42	100	83.403	ENSCAFG00000012818	DDX42	100	83.403	Canis_familiaris
ENSTGUG00000001931	DDX42	100	83.508	ENSCAFG00020026631	DDX42	100	83.508	Canis_lupus_dingo
ENSTGUG00000001931	DDX42	100	82.770	ENSCHIG00000014431	DDX42	100	83.351	Capra_hircus
ENSTGUG00000001931	DDX42	100	83.841	ENSTSYG00000001380	DDX42	100	84.050	Carlito_syrichta
ENSTGUG00000001931	DDX42	72	70.579	ENSCAPG00000013621	DDX42	93	70.579	Cavia_aperea
ENSTGUG00000001931	DDX42	100	83.562	ENSCPOG00000005633	DDX42	100	83.562	Cavia_porcellus
ENSTGUG00000001931	DDX42	100	78.325	ENSCCAG00000020612	DDX42	96	91.159	Cebus_capucinus
ENSTGUG00000001931	DDX42	100	83.613	ENSCATG00000030490	DDX42	100	83.613	Cercocebus_atys
ENSTGUG00000001931	DDX42	100	83.246	ENSCLAG00000003497	DDX42	100	83.246	Chinchilla_lanigera
ENSTGUG00000001931	DDX42	100	79.418	ENSCSAG00000003914	DDX42	100	79.522	Chlorocebus_sabaeus
ENSTGUG00000001931	DDX42	78	94.643	ENSCHOG00000006241	DDX42	78	94.643	Choloepus_hoffmanni
ENSTGUG00000001931	DDX42	100	84.880	ENSCPBG00000026682	DDX42	100	85.506	Chrysemys_picta_bellii
ENSTGUG00000001931	DDX42	100	83.613	ENSCANG00000034663	DDX42	99	90.831	Colobus_angolensis_palliatus
ENSTGUG00000001931	DDX42	100	83.736	ENSCGRG00001009775	Ddx42	100	83.736	Cricetulus_griseus_chok1gshd
ENSTGUG00000001931	DDX42	100	83.736	ENSCGRG00000011718	Ddx42	100	83.736	Cricetulus_griseus_crigri
ENSTGUG00000001931	DDX42	99	70.043	ENSCSEG00000021574	ddx42	99	70.106	Cynoglossus_semilaevis
ENSTGUG00000001931	DDX42	100	70.288	ENSCVAG00000011404	ddx42	99	71.702	Cyprinodon_variegatus
ENSTGUG00000001931	DDX42	100	68.835	ENSDARG00000037928	ddx42	99	70.137	Danio_rerio
ENSTGUG00000001931	DDX42	100	79.916	ENSDNOG00000007961	DDX42	100	80.021	Dasypus_novemcinctus
ENSTGUG00000001931	DDX42	100	76.803	ENSDORG00000004199	Ddx42	100	76.489	Dipodomys_ordii
ENSTGUG00000001931	DDX42	66	61.538	FBgn0036104	CG6418	87	57.880	Drosophila_melanogaster
ENSTGUG00000001931	DDX42	84	70.253	ENSEBUG00000001155	ddx42	93	70.000	Eptatretus_burgeri
ENSTGUG00000001931	DDX42	100	83.841	ENSEASG00005013089	DDX42	99	91.404	Equus_asinus_asinus
ENSTGUG00000001931	DDX42	100	84.050	ENSECAG00000022684	DDX42	100	83.945	Equus_caballus
ENSTGUG00000001931	DDX42	58	97.297	ENSEEUG00000009144	DDX42	73	97.297	Erinaceus_europaeus
ENSTGUG00000001931	DDX42	100	70.551	ENSELUG00000020593	ddx42	100	71.081	Esox_lucius
ENSTGUG00000001931	DDX42	100	83.987	ENSFCAG00000003499	DDX42	100	83.718	Felis_catus
ENSTGUG00000001931	DDX42	98	86.015	ENSFALG00000004675	DDX42	91	86.015	Ficedula_albicollis
ENSTGUG00000001931	DDX42	100	83.072	ENSFDAG00000020516	DDX42	100	83.281	Fukomys_damarensis
ENSTGUG00000001931	DDX42	99	69.607	ENSFHEG00000023290	ddx42	99	71.156	Fundulus_heteroclitus
ENSTGUG00000001931	DDX42	76	77.042	ENSGMOG00000004595	ddx42	87	76.620	Gadus_morhua
ENSTGUG00000001931	DDX42	100	90.890	ENSGALG00000000581	DDX42	100	90.890	Gallus_gallus
ENSTGUG00000001931	DDX42	88	76.614	ENSGAFG00000011846	ddx42	97	73.767	Gambusia_affinis
ENSTGUG00000001931	DDX42	99	67.094	ENSGACG00000009782	ddx42	99	66.774	Gasterosteus_aculeatus
ENSTGUG00000001931	DDX42	100	85.162	ENSGAGG00000024411	DDX42	99	85.266	Gopherus_agassizii
ENSTGUG00000001931	DDX42	100	83.929	ENSGGOG00000006779	DDX42	96	91.739	Gorilla_gorilla
ENSTGUG00000001931	DDX42	90	76.741	ENSHBUG00000008705	ddx42	99	73.645	Haplochromis_burtoni
ENSTGUG00000001931	DDX42	100	78.407	ENSHGLG00000010024	DDX42	100	78.407	Heterocephalus_glaber_female
ENSTGUG00000001931	DDX42	96	61.238	ENSHGLG00100007138	-	98	61.238	Heterocephalus_glaber_male
ENSTGUG00000001931	DDX42	100	82.668	ENSHGLG00100004479	-	100	82.668	Heterocephalus_glaber_male
ENSTGUG00000001931	DDX42	83	78.645	ENSHCOG00000003357	ddx42	99	69.626	Hippocampus_comes
ENSTGUG00000001931	DDX42	80	79.156	ENSIPUG00000013327	ddx42	100	70.626	Ictalurus_punctatus
ENSTGUG00000001931	DDX42	100	83.421	ENSSTOG00000008922	DDX42	100	83.421	Ictidomys_tridecemlineatus
ENSTGUG00000001931	DDX42	100	83.526	ENSJJAG00000011727	Ddx42	100	83.526	Jaculus_jaculus
ENSTGUG00000001931	DDX42	99	69.758	ENSKMAG00000009914	ddx42	99	71.852	Kryptolebias_marmoratus
ENSTGUG00000001931	DDX42	81	75.489	ENSLBEG00000004687	ddx42	99	66.211	Labrus_bergylta
ENSTGUG00000001931	DDX42	99	75.213	ENSLACG00000013476	DDX42	97	76.408	Latimeria_chalumnae
ENSTGUG00000001931	DDX42	100	72.803	ENSLOCG00000011764	ddx42	100	74.038	Lepisosteus_oculatus
ENSTGUG00000001931	DDX42	100	84.249	ENSLAFG00000003249	DDX42	100	84.050	Loxodonta_africana
ENSTGUG00000001931	DDX42	100	83.613	ENSMFAG00000031356	DDX42	100	83.613	Macaca_fascicularis
ENSTGUG00000001931	DDX42	100	83.983	ENSMMUG00000016762	DDX42	95	91.449	Macaca_mulatta
ENSTGUG00000001931	DDX42	100	83.613	ENSMNEG00000038250	DDX42	100	83.613	Macaca_nemestrina
ENSTGUG00000001931	DDX42	100	82.968	ENSMLEG00000043080	DDX42	100	83.072	Mandrillus_leucophaeus
ENSTGUG00000001931	DDX42	87	77.954	ENSMAMG00000021888	ddx42	98	72.505	Mastacembelus_armatus
ENSTGUG00000001931	DDX42	90	76.505	ENSMZEG00005023103	ddx42	99	73.433	Maylandia_zebra
ENSTGUG00000001931	DDX42	100	90.576	ENSMGAG00000001822	DDX42	100	90.576	Meleagris_gallopavo
ENSTGUG00000001931	DDX42	75	90.185	ENSMAUG00000020774	-	94	90.185	Mesocricetus_auratus
ENSTGUG00000001931	DDX42	100	83.403	ENSMICG00000009952	DDX42	100	83.298	Microcebus_murinus
ENSTGUG00000001931	DDX42	100	83.106	ENSMOCG00000015504	Ddx42	100	83.106	Microtus_ochrogaster
ENSTGUG00000001931	DDX42	87	72.805	ENSMMOG00000016963	ddx42	83	73.171	Mola_mola
ENSTGUG00000001931	DDX42	50	94.658	ENSMODG00000009917	-	98	94.658	Monodelphis_domestica
ENSTGUG00000001931	DDX42	99	70.789	ENSMALG00000007800	ddx42	99	70.896	Monopterus_albus
ENSTGUG00000001931	DDX42	100	83.421	MGP_CAROLIEiJ_G0017314	Ddx42	100	83.421	Mus_caroli
ENSTGUG00000001931	DDX42	100	83.316	ENSMUSG00000020705	Ddx42	100	83.316	Mus_musculus
ENSTGUG00000001931	DDX42	72	95.104	MGP_PahariEiJ_G0018444	-	96	94.993	Mus_pahari
ENSTGUG00000001931	DDX42	100	83.526	MGP_SPRETEiJ_G0018158	Ddx42	100	83.526	Mus_spretus
ENSTGUG00000001931	DDX42	100	83.177	ENSMPUG00000014921	DDX42	100	83.804	Mustela_putorius_furo
ENSTGUG00000001931	DDX42	100	83.560	ENSMLUG00000011645	DDX42	100	84.100	Myotis_lucifugus
ENSTGUG00000001931	DDX42	100	84.477	ENSNGAG00000021897	Ddx42	100	84.477	Nannospalax_galili
ENSTGUG00000001931	DDX42	90	75.443	ENSNBRG00000004466	ddx42	99	72.476	Neolamprologus_brichardi
ENSTGUG00000001931	DDX42	100	83.682	ENSNLEG00000004248	DDX42	98	91.594	Nomascus_leucogenys
ENSTGUG00000001931	DDX42	72	80.796	ENSMEUG00000013227	-	85	80.796	Notamacropus_eugenii
ENSTGUG00000001931	DDX42	100	83.368	ENSOPRG00000014960	DDX42	100	83.264	Ochotona_princeps
ENSTGUG00000001931	DDX42	100	79.895	ENSODEG00000007810	DDX42	100	79.895	Octodon_degus
ENSTGUG00000001931	DDX42	90	76.860	ENSONIG00000000734	ddx42	99	73.751	Oreochromis_niloticus
ENSTGUG00000001931	DDX42	58	90.741	ENSOANG00000000265	DDX42	100	90.741	Ornithorhynchus_anatinus
ENSTGUG00000001931	DDX42	97	84.775	ENSOCUG00000004304	DDX42	88	84.775	Oryctolagus_cuniculus
ENSTGUG00000001931	DDX42	100	69.710	ENSORLG00000002395	ddx42	100	70.957	Oryzias_latipes
ENSTGUG00000001931	DDX42	100	71.792	ENSORLG00020011621	ddx42	100	72.216	Oryzias_latipes_hni
ENSTGUG00000001931	DDX42	100	70.988	ENSORLG00015004487	ddx42	100	72.534	Oryzias_latipes_hsok
ENSTGUG00000001931	DDX42	83	79.641	ENSOMEG00000020093	ddx42	100	72.246	Oryzias_melastigma
ENSTGUG00000001931	DDX42	100	83.141	ENSOGAG00000006872	DDX42	100	83.264	Otolemur_garnettii
ENSTGUG00000001931	DDX42	100	83.070	ENSOARG00000013540	DDX42	100	83.560	Ovis_aries
ENSTGUG00000001931	DDX42	100	83.824	ENSPPAG00000007496	DDX42	96	91.570	Pan_paniscus
ENSTGUG00000001931	DDX42	100	84.199	ENSPPRG00000002740	DDX42	100	83.929	Panthera_pardus
ENSTGUG00000001931	DDX42	100	83.490	ENSPTIG00000009932	DDX42	100	83.490	Panthera_tigris_altaica
ENSTGUG00000001931	DDX42	100	83.824	ENSPTRG00000009523	DDX42	96	91.570	Pan_troglodytes
ENSTGUG00000001931	DDX42	100	83.508	ENSPANG00000020990	DDX42	100	83.508	Papio_anubis
ENSTGUG00000001931	DDX42	100	70.138	ENSPKIG00000002901	ddx42	100	70.181	Paramormyrops_kingsleyae
ENSTGUG00000001931	DDX42	86	93.416	ENSPSIG00000010289	DDX42	98	93.457	Pelodiscus_sinensis
ENSTGUG00000001931	DDX42	93	70.115	ENSPMGG00000009323	ddx42	100	68.191	Periophthalmus_magnuspinnatus
ENSTGUG00000001931	DDX42	100	83.438	ENSPEMG00000006755	Ddx42	100	83.438	Peromyscus_maniculatus_bairdii
ENSTGUG00000001931	DDX42	80	72.120	ENSPMAG00000005580	ddx42	100	72.775	Petromyzon_marinus
ENSTGUG00000001931	DDX42	100	83.421	ENSPCIG00000009093	DDX42	100	83.736	Phascolarctos_cinereus
ENSTGUG00000001931	DDX42	99	71.852	ENSPFOG00000014104	ddx42	99	72.534	Poecilia_formosa
ENSTGUG00000001931	DDX42	100	71.776	ENSPLAG00000010522	ddx42	99	72.534	Poecilia_latipinna
ENSTGUG00000001931	DDX42	100	70.964	ENSPMEG00000010744	ddx42	99	71.924	Poecilia_mexicana
ENSTGUG00000001931	DDX42	100	70.166	ENSPREG00000009926	ddx42	99	71.011	Poecilia_reticulata
ENSTGUG00000001931	DDX42	100	81.061	ENSPPYG00000008531	DDX42	100	81.061	Pongo_abelii
ENSTGUG00000001931	DDX42	92	78.449	ENSPCAG00000002474	DDX42	100	78.043	Procavia_capensis
ENSTGUG00000001931	DDX42	100	74.187	ENSPCOG00000001559	DDX42	98	82.966	Propithecus_coquereli
ENSTGUG00000001931	DDX42	100	81.587	ENSPVAG00000000160	DDX42	100	81.587	Pteropus_vampyrus
ENSTGUG00000001931	DDX42	75	75.107	ENSPNYG00000013954	ddx42	97	71.859	Pundamilia_nyererei
ENSTGUG00000001931	DDX42	78	80.816	ENSPNAG00000017352	ddx42	99	70.166	Pygocentrus_nattereri
ENSTGUG00000001931	DDX42	100	83.106	ENSRNOG00000009474	Ddx42	100	83.106	Rattus_norvegicus
ENSTGUG00000001931	DDX42	100	83.738	ENSRBIG00000004781	DDX42	99	90.831	Rhinopithecus_bieti
ENSTGUG00000001931	DDX42	100	83.613	ENSRROG00000029794	DDX42	100	83.613	Rhinopithecus_roxellana
ENSTGUG00000001931	DDX42	100	83.560	ENSSBOG00000029624	DDX42	96	91.304	Saimiri_boliviensis_boliviensis
ENSTGUG00000001931	DDX42	100	83.736	ENSSHAG00000012896	-	100	84.050	Sarcophilus_harrisii
ENSTGUG00000001931	DDX42	71	56.029	ENSSHAG00000007919	-	99	56.029	Sarcophilus_harrisii
ENSTGUG00000001931	DDX42	77	82.920	ENSSFOG00015014064	ddx42	81	82.095	Scleropages_formosus
ENSTGUG00000001931	DDX42	84	79.008	ENSSMAG00000009077	ddx42	99	71.026	Scophthalmus_maximus
ENSTGUG00000001931	DDX42	99	71.534	ENSSDUG00000022221	ddx42	99	71.911	Seriola_dumerili
ENSTGUG00000001931	DDX42	99	71.291	ENSSLDG00000018483	ddx42	99	71.353	Seriola_lalandi_dorsalis
ENSTGUG00000001931	DDX42	100	83.001	ENSSARG00000009847	DDX42	100	83.211	Sorex_araneus
ENSTGUG00000001931	DDX42	100	86.943	ENSSPUG00000018806	DDX42	100	86.943	Sphenodon_punctatus
ENSTGUG00000001931	DDX42	87	77.119	ENSSPAG00000013055	ddx42	99	71.504	Stegastes_partitus
ENSTGUG00000001931	DDX42	85	83.045	ENSSSCG00000017289	DDX42	97	82.864	Sus_scrofa
ENSTGUG00000001931	DDX42	99	70.043	ENSTRUG00000010711	ddx42	99	80.266	Takifugu_rubripes
ENSTGUG00000001931	DDX42	82	88.845	ENSTBEG00000010159	DDX42	100	88.845	Tupaia_belangeri
ENSTGUG00000001931	DDX42	100	82.586	ENSTTRG00000006962	DDX42	100	83.333	Tursiops_truncatus
ENSTGUG00000001931	DDX42	100	83.718	ENSUAMG00000007321	DDX42	100	83.718	Ursus_americanus
ENSTGUG00000001931	DDX42	100	83.650	ENSUMAG00000017438	DDX42	100	83.650	Ursus_maritimus
ENSTGUG00000001931	DDX42	100	73.729	ENSVPAG00000009633	DDX42	100	73.452	Vicugna_pacos
ENSTGUG00000001931	DDX42	100	83.718	ENSVVUG00000006095	DDX42	100	83.718	Vulpes_vulpes
ENSTGUG00000001931	DDX42	100	75.941	ENSXETG00000003245	ddx42	100	75.417	Xenopus_tropicalis
ENSTGUG00000001931	DDX42	84	71.338	ENSXCOG00000017560	ddx42	97	72.383	Xiphophorus_couchianus
ENSTGUG00000001931	DDX42	100	71.429	ENSXMAG00000008138	ddx42	99	72.204	Xiphophorus_maculatus