EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000002013 (Gene tree)
Gene ID: 100220084
Gene Symbol: RBM17
Alias: MGC14439|SPF45
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 11004 bases
Position: chr1A:2817900-2828903
Accession: 16944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000002081	RRM_1	PF00076.22	5.4e-05	1	1
ENSTGUP00000002081	G-patch	PF01585.23	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002101	RBM17-201	1218	-	ENSTGUP00000002081	405 (aa)	-	H0YUW1

Gene Model

Click here to download ENSTGUG00000002013's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000002013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000002013	RBM17	100	94.074	ENSG00000134453	RBM17	100	94.340	Homo_sapiens
ENSTGUG00000002013	RBM17	99	82.266	ENSAPOG00000007101	rbm17	99	82.266	Acanthochromis_polyacanthus
ENSTGUG00000002013	RBM17	100	93.827	ENSAMEG00000002107	RBM17	100	93.827	Ailuropoda_melanoleuca
ENSTGUG00000002013	RBM17	100	78.832	ENSACIG00000006251	rbm17	100	78.832	Amphilophus_citrinellus
ENSTGUG00000002013	RBM17	100	82.195	ENSAOCG00000014892	rbm17	100	82.195	Amphiprion_ocellaris
ENSTGUG00000002013	RBM17	100	82.195	ENSAPEG00000022779	rbm17	100	82.195	Amphiprion_percula
ENSTGUG00000002013	RBM17	100	79.245	ENSATEG00000004406	rbm17	100	79.245	Anabas_testudineus
ENSTGUG00000002013	RBM17	100	97.531	ENSAPLG00000004190	RBM17	100	97.531	Anas_platyrhynchos
ENSTGUG00000002013	RBM17	89	92.162	ENSACAG00000005418	RBM17	99	92.162	Anolis_carolinensis
ENSTGUG00000002013	RBM17	100	94.074	ENSANAG00000030127	RBM17	100	94.074	Aotus_nancymaae
ENSTGUG00000002013	RBM17	100	80.049	ENSANAG00000019330	-	92	93.805	Aotus_nancymaae
ENSTGUG00000002013	RBM17	100	78.676	ENSACLG00000003928	rbm17	100	78.676	Astatotilapia_calliptera
ENSTGUG00000002013	RBM17	100	78.118	ENSAMXG00000005853	rbm17	100	80.706	Astyanax_mexicanus
ENSTGUG00000002013	RBM17	100	92.593	ENSBTAG00000011094	-	100	92.593	Bos_taurus
ENSTGUG00000002013	RBM17	100	94.074	ENSBTAG00000021951	RBM17	100	94.074	Bos_taurus
ENSTGUG00000002013	RBM17	74	33.003	WBGene00010233	F58B3.7	91	31.458	Caenorhabditis_elegans
ENSTGUG00000002013	RBM17	100	94.074	ENSCJAG00000020573	RBM17	100	94.074	Callithrix_jacchus
ENSTGUG00000002013	RBM17	100	93.827	ENSCAFG00000005206	RBM17	100	93.827	Canis_familiaris
ENSTGUG00000002013	RBM17	100	89.630	ENSCAFG00020005420	RBM17	100	89.630	Canis_lupus_dingo
ENSTGUG00000002013	RBM17	100	91.358	ENSCHIG00000019921	-	100	91.358	Capra_hircus
ENSTGUG00000002013	RBM17	100	94.074	ENSCHIG00000023204	-	100	94.074	Capra_hircus
ENSTGUG00000002013	RBM17	100	93.827	ENSTSYG00000001165	RBM17	95	99.115	Carlito_syrichta
ENSTGUG00000002013	RBM17	96	73.146	ENSCAPG00000006275	RBM17	100	78.142	Cavia_aperea
ENSTGUG00000002013	RBM17	100	89.976	ENSCPOG00000005679	RBM17	100	89.976	Cavia_porcellus
ENSTGUG00000002013	RBM17	100	94.074	ENSCCAG00000018655	RBM17	100	94.074	Cebus_capucinus
ENSTGUG00000002013	RBM17	100	94.074	ENSCATG00000041566	RBM17	100	94.074	Cercocebus_atys
ENSTGUG00000002013	RBM17	100	94.074	ENSCLAG00000012195	RBM17	99	94.074	Chinchilla_lanigera
ENSTGUG00000002013	RBM17	100	94.074	ENSCSAG00000013564	RBM17	100	94.074	Chlorocebus_sabaeus
ENSTGUG00000002013	RBM17	92	75.134	ENSCHOG00000005131	RBM17	100	75.134	Choloepus_hoffmanni
ENSTGUG00000002013	RBM17	100	95.556	ENSCPBG00000019836	RBM17	100	95.556	Chrysemys_picta_bellii
ENSTGUG00000002013	RBM17	100	46.973	ENSCSAVG00000008782	-	100	45.388	Ciona_savignyi
ENSTGUG00000002013	RBM17	98	82.323	ENSCANG00000023715	-	100	82.323	Colobus_angolensis_palliatus
ENSTGUG00000002013	RBM17	100	93.827	ENSCANG00000030987	RBM17	100	93.827	Colobus_angolensis_palliatus
ENSTGUG00000002013	RBM17	100	94.815	ENSCGRG00001013842	Rbm17	100	94.815	Cricetulus_griseus_chok1gshd
ENSTGUG00000002013	RBM17	100	72.593	ENSCGRG00001009256	-	100	70.617	Cricetulus_griseus_chok1gshd
ENSTGUG00000002013	RBM17	100	94.815	ENSCGRG00000006907	Rbm17	100	94.815	Cricetulus_griseus_crigri
ENSTGUG00000002013	RBM17	100	78.780	ENSCSEG00000018164	rbm17	100	78.780	Cynoglossus_semilaevis
ENSTGUG00000002013	RBM17	100	73.529	ENSCVAG00000002476	rbm17	100	74.879	Cyprinodon_variegatus
ENSTGUG00000002013	RBM17	100	77.412	ENSDARG00000031346	rbm17	100	77.412	Danio_rerio
ENSTGUG00000002013	RBM17	100	94.568	ENSDNOG00000035920	RBM17	100	94.568	Dasypus_novemcinctus
ENSTGUG00000002013	RBM17	99	35.526	FBgn0086683	Spf45	99	35.714	Drosophila_melanogaster
ENSTGUG00000002013	RBM17	100	71.852	ENSETEG00000006642	RBM17	100	71.852	Echinops_telfairi
ENSTGUG00000002013	RBM17	64	70.732	ENSEBUG00000010253	rbm17	86	70.732	Eptatretus_burgeri
ENSTGUG00000002013	RBM17	100	89.655	ENSEASG00005019205	-	100	89.655	Equus_asinus_asinus
ENSTGUG00000002013	RBM17	92	90.107	ENSEASG00005009236	-	100	90.107	Equus_asinus_asinus
ENSTGUG00000002013	RBM17	100	78.025	ENSECAG00000008939	RBM17	100	80.247	Equus_caballus
ENSTGUG00000002013	RBM17	100	83.210	ENSECAG00000001379	-	100	83.210	Equus_caballus
ENSTGUG00000002013	RBM17	86	77.011	ENSEEUG00000013077	RBM17	100	77.011	Erinaceus_europaeus
ENSTGUG00000002013	RBM17	100	77.083	ENSELUG00000006440	rbm17	100	77.083	Esox_lucius
ENSTGUG00000002013	RBM17	100	93.827	ENSFCAG00000031988	RBM17	100	93.827	Felis_catus
ENSTGUG00000002013	RBM17	100	98.765	ENSFALG00000001790	RBM17	100	98.765	Ficedula_albicollis
ENSTGUG00000002013	RBM17	100	94.074	ENSFDAG00000007470	RBM17	100	94.074	Fukomys_damarensis
ENSTGUG00000002013	RBM17	100	77.830	ENSFHEG00000001266	rbm17	100	76.923	Fundulus_heteroclitus
ENSTGUG00000002013	RBM17	99	75.297	ENSGMOG00000008438	rbm17	100	75.297	Gadus_morhua
ENSTGUG00000002013	RBM17	100	97.284	ENSGALG00000006332	RBM17	100	97.284	Gallus_gallus
ENSTGUG00000002013	RBM17	100	79.268	ENSGAFG00000019879	rbm17	100	79.268	Gambusia_affinis
ENSTGUG00000002013	RBM17	99	80.929	ENSGACG00000019174	rbm17	99	80.929	Gasterosteus_aculeatus
ENSTGUG00000002013	RBM17	100	95.556	ENSGAGG00000019906	RBM17	100	95.556	Gopherus_agassizii
ENSTGUG00000002013	RBM17	100	83.171	ENSHBUG00000016624	rbm17	100	83.171	Haplochromis_burtoni
ENSTGUG00000002013	RBM17	100	94.074	ENSHGLG00000011580	RBM17	100	94.074	Heterocephalus_glaber_female
ENSTGUG00000002013	RBM17	100	72.840	ENSHGLG00100010556	-	100	71.111	Heterocephalus_glaber_male
ENSTGUG00000002013	RBM17	100	94.074	ENSHGLG00100010460	RBM17	100	94.074	Heterocephalus_glaber_male
ENSTGUG00000002013	RBM17	99	77.327	ENSHCOG00000010865	rbm17	100	76.850	Hippocampus_comes
ENSTGUG00000002013	RBM17	100	78.689	ENSIPUG00000007699	Rbm17	100	78.689	Ictalurus_punctatus
ENSTGUG00000002013	RBM17	100	94.568	ENSSTOG00000013591	RBM17	100	94.568	Ictidomys_tridecemlineatus
ENSTGUG00000002013	RBM17	100	70.370	ENSJJAG00000000993	-	100	67.076	Jaculus_jaculus
ENSTGUG00000002013	RBM17	100	94.815	ENSJJAG00000022886	Rbm17	100	94.815	Jaculus_jaculus
ENSTGUG00000002013	RBM17	100	78.302	ENSKMAG00000021400	rbm17	100	79.009	Kryptolebias_marmoratus
ENSTGUG00000002013	RBM17	100	80.732	ENSLBEG00000000881	rbm17	100	78.302	Labrus_bergylta
ENSTGUG00000002013	RBM17	99	70.353	ENSLACG00000017297	RBM17	99	70.353	Latimeria_chalumnae
ENSTGUG00000002013	RBM17	100	87.745	ENSLOCG00000015659	rbm17	100	87.745	Lepisosteus_oculatus
ENSTGUG00000002013	RBM17	100	94.349	ENSLAFG00000011629	RBM17	100	94.349	Loxodonta_africana
ENSTGUG00000002013	RBM17	100	94.074	ENSMFAG00000035521	RBM17	100	94.074	Macaca_fascicularis
ENSTGUG00000002013	RBM17	100	94.074	ENSMMUG00000015152	RBM17	100	94.074	Macaca_mulatta
ENSTGUG00000002013	RBM17	100	94.074	ENSMNEG00000017264	RBM17	100	94.074	Macaca_nemestrina
ENSTGUG00000002013	RBM17	100	94.074	ENSMLEG00000029340	RBM17	100	94.074	Mandrillus_leucophaeus
ENSTGUG00000002013	RBM17	100	78.538	ENSMAMG00000000387	rbm17	100	78.538	Mastacembelus_armatus
ENSTGUG00000002013	RBM17	100	81.043	ENSMZEG00005015179	rbm17	100	81.043	Maylandia_zebra
ENSTGUG00000002013	RBM17	100	96.569	ENSMGAG00000003981	RBM17	100	96.569	Meleagris_gallopavo
ENSTGUG00000002013	RBM17	100	94.815	ENSMAUG00000019247	Rbm17	100	94.815	Mesocricetus_auratus
ENSTGUG00000002013	RBM17	100	86.553	ENSMICG00000041489	-	100	86.553	Microcebus_murinus
ENSTGUG00000002013	RBM17	100	93.827	ENSMICG00000003976	-	100	93.827	Microcebus_murinus
ENSTGUG00000002013	RBM17	100	94.815	ENSMOCG00000011847	Rbm17	100	94.815	Microtus_ochrogaster
ENSTGUG00000002013	RBM17	93	77.867	ENSMOCG00000014517	-	99	77.867	Microtus_ochrogaster
ENSTGUG00000002013	RBM17	100	74.940	ENSMMOG00000010264	rbm17	100	73.735	Mola_mola
ENSTGUG00000002013	RBM17	100	94.815	ENSMODG00000016648	RBM17	100	94.815	Monodelphis_domestica
ENSTGUG00000002013	RBM17	100	78.588	ENSMALG00000010597	rbm17	100	78.588	Monopterus_albus
ENSTGUG00000002013	RBM17	100	94.321	MGP_CAROLIEiJ_G0023173	Rbm17	100	94.321	Mus_caroli
ENSTGUG00000002013	RBM17	100	94.321	ENSMUSG00000037197	Rbm17	100	94.321	Mus_musculus
ENSTGUG00000002013	RBM17	100	94.321	MGP_PahariEiJ_G0019233	Rbm17	100	94.321	Mus_pahari
ENSTGUG00000002013	RBM17	100	94.321	MGP_SPRETEiJ_G0024091	Rbm17	100	94.321	Mus_spretus
ENSTGUG00000002013	RBM17	86	92.286	ENSMPUG00000016359	RBM17	97	92.286	Mustela_putorius_furo
ENSTGUG00000002013	RBM17	100	93.103	ENSMLUG00000002302	-	100	93.103	Myotis_lucifugus
ENSTGUG00000002013	RBM17	100	89.383	ENSMLUG00000025709	-	100	87.901	Myotis_lucifugus
ENSTGUG00000002013	RBM17	100	65.926	ENSNGAG00000000663	-	100	65.432	Nannospalax_galili
ENSTGUG00000002013	RBM17	100	94.815	ENSNGAG00000000741	Rbm17	100	94.815	Nannospalax_galili
ENSTGUG00000002013	RBM17	100	77.206	ENSNBRG00000018148	rbm17	100	77.206	Neolamprologus_brichardi
ENSTGUG00000002013	RBM17	100	94.074	ENSNLEG00000033350	RBM17	100	94.074	Nomascus_leucogenys
ENSTGUG00000002013	RBM17	100	88.642	ENSMEUG00000011347	RBM17	100	88.642	Notamacropus_eugenii
ENSTGUG00000002013	RBM17	100	80.494	ENSOPRG00000002993	RBM17	100	80.494	Ochotona_princeps
ENSTGUG00000002013	RBM17	97	72.519	ENSODEG00000007286	-	99	72.519	Octodon_degus
ENSTGUG00000002013	RBM17	100	93.596	ENSODEG00000004393	RBM17	100	93.596	Octodon_degus
ENSTGUG00000002013	RBM17	100	83.171	ENSONIG00000011838	rbm17	100	83.171	Oreochromis_niloticus
ENSTGUG00000002013	RBM17	100	94.568	ENSOANG00000015455	RBM17	100	94.568	Ornithorhynchus_anatinus
ENSTGUG00000002013	RBM17	100	79.529	ENSORLG00000028798	rbm17	100	79.529	Oryzias_latipes
ENSTGUG00000002013	RBM17	100	79.529	ENSORLG00020004593	rbm17	98	79.529	Oryzias_latipes_hni
ENSTGUG00000002013	RBM17	100	81.995	ENSORLG00015000033	rbm17	100	81.995	Oryzias_latipes_hsok
ENSTGUG00000002013	RBM17	100	79.529	ENSOMEG00000012060	rbm17	100	84.663	Oryzias_melastigma
ENSTGUG00000002013	RBM17	100	94.074	ENSOGAG00000015687	RBM17	100	94.074	Otolemur_garnettii
ENSTGUG00000002013	RBM17	100	94.074	ENSOARG00000012975	RBM17	100	94.074	Ovis_aries
ENSTGUG00000002013	RBM17	100	94.074	ENSPPAG00000032347	RBM17	100	94.074	Pan_paniscus
ENSTGUG00000002013	RBM17	100	93.827	ENSPPRG00000010706	RBM17	100	93.827	Panthera_pardus
ENSTGUG00000002013	RBM17	100	93.827	ENSPTIG00000007596	RBM17	100	93.827	Panthera_tigris_altaica
ENSTGUG00000002013	RBM17	100	94.074	ENSPTRG00000002265	RBM17	100	94.074	Pan_troglodytes
ENSTGUG00000002013	RBM17	100	94.074	ENSPANG00000023425	RBM17	100	94.074	Papio_anubis
ENSTGUG00000002013	RBM17	100	76.761	ENSPKIG00000005048	-	100	76.761	Paramormyrops_kingsleyae
ENSTGUG00000002013	RBM17	100	80.471	ENSPKIG00000025526	rbm17	100	79.812	Paramormyrops_kingsleyae
ENSTGUG00000002013	RBM17	100	94.118	ENSPSIG00000012332	RBM17	100	94.118	Pelodiscus_sinensis
ENSTGUG00000002013	RBM17	100	75.300	ENSPMGG00000007980	rbm17	100	75.300	Periophthalmus_magnuspinnatus
ENSTGUG00000002013	RBM17	100	94.815	ENSPEMG00000014320	Rbm17	100	94.815	Peromyscus_maniculatus_bairdii
ENSTGUG00000002013	RBM17	100	94.349	ENSPCIG00000019260	-	100	94.349	Phascolarctos_cinereus
ENSTGUG00000002013	RBM17	100	78.302	ENSPFOG00000013271	rbm17	100	78.302	Poecilia_formosa
ENSTGUG00000002013	RBM17	100	78.538	ENSPLAG00000004455	rbm17	100	78.538	Poecilia_latipinna
ENSTGUG00000002013	RBM17	100	80.488	ENSPMEG00000014864	rbm17	100	80.488	Poecilia_mexicana
ENSTGUG00000002013	RBM17	100	77.594	ENSPREG00000015589	rbm17	100	77.594	Poecilia_reticulata
ENSTGUG00000002013	RBM17	81	66.667	ENSPPYG00000019042	-	100	66.361	Pongo_abelii
ENSTGUG00000002013	RBM17	99	68.983	ENSPPYG00000019881	-	100	68.734	Pongo_abelii
ENSTGUG00000002013	RBM17	100	94.074	ENSPPYG00000002067	RBM17	100	94.074	Pongo_abelii
ENSTGUG00000002013	RBM17	100	86.420	ENSPCAG00000016879	RBM17	100	86.420	Procavia_capensis
ENSTGUG00000002013	RBM17	100	93.580	ENSPCOG00000027881	RBM17	100	93.580	Propithecus_coquereli
ENSTGUG00000002013	RBM17	100	83.704	ENSPVAG00000015499	RBM17	100	82.222	Pteropus_vampyrus
ENSTGUG00000002013	RBM17	100	76.049	ENSPNYG00000015274	rbm17	100	76.296	Pundamilia_nyererei
ENSTGUG00000002013	RBM17	100	80.235	ENSPNAG00000030046	rbm17	100	80.235	Pygocentrus_nattereri
ENSTGUG00000002013	RBM17	100	94.815	ENSRNOG00000018767	Rbm17	100	94.815	Rattus_norvegicus
ENSTGUG00000002013	RBM17	100	94.074	ENSRBIG00000043727	RBM17	100	94.074	Rhinopithecus_bieti
ENSTGUG00000002013	RBM17	100	94.074	ENSRROG00000044142	RBM17	100	94.074	Rhinopithecus_roxellana
ENSTGUG00000002013	RBM17	100	83.704	ENSSBOG00000023653	-	100	83.704	Saimiri_boliviensis_boliviensis
ENSTGUG00000002013	RBM17	100	93.827	ENSSBOG00000031661	-	100	93.827	Saimiri_boliviensis_boliviensis
ENSTGUG00000002013	RBM17	100	95.074	ENSSHAG00000012480	-	100	95.074	Sarcophilus_harrisii
ENSTGUG00000002013	RBM17	100	81.707	ENSSFOG00015009892	rbm17	100	81.707	Scleropages_formosus
ENSTGUG00000002013	RBM17	100	77.641	ENSSMAG00000012368	rbm17	100	77.136	Scophthalmus_maximus
ENSTGUG00000002013	RBM17	100	81.446	ENSSDUG00000015015	rbm17	100	81.731	Seriola_dumerili
ENSTGUG00000002013	RBM17	100	81.446	ENSSLDG00000014486	rbm17	100	81.731	Seriola_lalandi_dorsalis
ENSTGUG00000002013	RBM17	59	75.000	ENSSARG00000001792	-	100	75.000	Sorex_araneus
ENSTGUG00000002013	RBM17	99	94.554	ENSSPUG00000001036	RBM17	99	94.554	Sphenodon_punctatus
ENSTGUG00000002013	RBM17	100	82.927	ENSSPAG00000002338	rbm17	100	82.927	Stegastes_partitus
ENSTGUG00000002013	RBM17	100	93.827	ENSSSCG00000011134	RBM17	100	93.827	Sus_scrofa
ENSTGUG00000002013	RBM17	100	81.220	ENSTRUG00000010698	rbm17	100	81.220	Takifugu_rubripes
ENSTGUG00000002013	RBM17	100	81.707	ENSTNIG00000006892	rbm17	100	81.707	Tetraodon_nigroviridis
ENSTGUG00000002013	RBM17	100	73.333	ENSTBEG00000014686	RBM17	100	73.333	Tupaia_belangeri
ENSTGUG00000002013	RBM17	90	93.407	ENSTTRG00000001344	RBM17	100	93.407	Tursiops_truncatus
ENSTGUG00000002013	RBM17	100	89.630	ENSUAMG00000009499	RBM17	100	89.630	Ursus_americanus
ENSTGUG00000002013	RBM17	100	93.580	ENSUMAG00000012237	RBM17	100	93.580	Ursus_maritimus
ENSTGUG00000002013	RBM17	100	80.494	ENSVPAG00000005497	RBM17	100	80.494	Vicugna_pacos
ENSTGUG00000002013	RBM17	100	89.630	ENSVVUG00000006780	RBM17	100	89.630	Vulpes_vulpes
ENSTGUG00000002013	RBM17	99	86.600	ENSXETG00000018123	rbm17	100	86.600	Xenopus_tropicalis
ENSTGUG00000002013	RBM17	100	80.000	ENSXMAG00000008674	rbm17	100	80.000	Xiphophorus_maculatus