EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000002098 (Gene tree)
Gene ID: 100225808
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 14523 bases
Position: chr4:7333166-7347688
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000002165	La	PF05383.17	8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002185	-	2475	-	ENSTGUP00000002165	825 (aa)	-	H0YV44

Gene Model

Click here to download ENSTGUG00000002098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000002098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000002098	-	88	63.032	ENSTGUG00000000704	LARP1	81	62.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000002098	-	96	66.932	ENSG00000138709	LARP1B	96	66.129	Homo_sapiens
ENSTGUG00000002098	-	94	59.620	ENSAPOG00000020101	larp1b	82	58.195	Acanthochromis_polyacanthus
ENSTGUG00000002098	-	60	62.847	ENSAMEG00000002748	LARP1B	74	70.531	Ailuropoda_melanoleuca
ENSTGUG00000002098	-	95	56.796	ENSACIG00000023890	larp1b	73	59.278	Amphilophus_citrinellus
ENSTGUG00000002098	-	87	58.322	ENSAOCG00000014268	larp1b	84	56.242	Amphiprion_ocellaris
ENSTGUG00000002098	-	92	60.356	ENSAPEG00000004126	larp1b	81	58.076	Amphiprion_percula
ENSTGUG00000002098	-	97	58.824	ENSATEG00000017849	larp1b	79	59.174	Anabas_testudineus
ENSTGUG00000002098	-	95	73.318	ENSAPLG00000010129	LARP1B	88	79.893	Anas_platyrhynchos
ENSTGUG00000002098	-	89	71.286	ENSACAG00000011338	LARP1B	73	76.404	Anolis_carolinensis
ENSTGUG00000002098	-	75	66.413	ENSANAG00000034618	LARP1B	76	64.623	Aotus_nancymaae
ENSTGUG00000002098	-	80	62.629	ENSACLG00000011948	larp1b	69	60.105	Astatotilapia_calliptera
ENSTGUG00000002098	-	91	51.241	ENSAMXG00000006805	larp1b	73	55.031	Astyanax_mexicanus
ENSTGUG00000002098	-	99	65.993	ENSBTAG00000012135	LARP1B	82	72.944	Bos_taurus
ENSTGUG00000002098	-	98	66.439	ENSCJAG00000003338	LARP1B	90	73.773	Callithrix_jacchus
ENSTGUG00000002098	-	95	72.613	ENSCAFG00000003831	LARP1B	95	72.613	Canis_familiaris
ENSTGUG00000002098	-	99	65.461	ENSCAFG00020018899	LARP1B	93	69.403	Canis_lupus_dingo
ENSTGUG00000002098	-	99	64.778	ENSCHIG00000023144	LARP1B	93	67.778	Capra_hircus
ENSTGUG00000002098	-	96	66.934	ENSCCAG00000021948	LARP1B	88	69.843	Cebus_capucinus
ENSTGUG00000002098	-	96	66.553	ENSCATG00000013541	LARP1B	89	69.390	Cercocebus_atys
ENSTGUG00000002098	-	96	67.234	ENSCSAG00000003582	LARP1B	89	70.284	Chlorocebus_sabaeus
ENSTGUG00000002098	-	97	63.105	ENSCHOG00000005354	LARP1B	91	66.158	Choloepus_hoffmanni
ENSTGUG00000002098	-	99	70.309	ENSCPBG00000017480	LARP1B	80	76.076	Chrysemys_picta_bellii
ENSTGUG00000002098	-	96	69.366	ENSCANG00000026958	LARP1B	94	69.799	Colobus_angolensis_palliatus
ENSTGUG00000002098	-	80	62.099	ENSCSEG00000013519	larp1b	65	60.055	Cynoglossus_semilaevis
ENSTGUG00000002098	-	83	60.962	ENSCVAG00000005046	larp1b	71	58.768	Cyprinodon_variegatus
ENSTGUG00000002098	-	98	56.028	ENSDARG00000061169	larp1b	77	57.379	Danio_rerio
ENSTGUG00000002098	-	54	64.848	ENSDNOG00000018765	-	96	62.222	Dasypus_novemcinctus
ENSTGUG00000002098	-	85	62.861	ENSETEG00000012497	LARP1B	80	63.150	Echinops_telfairi
ENSTGUG00000002098	-	77	54.482	ENSEBUG00000003668	larp1b	70	52.394	Eptatretus_burgeri
ENSTGUG00000002098	-	98	66.587	ENSEASG00005018106	LARP1B	93	69.776	Equus_asinus_asinus
ENSTGUG00000002098	-	98	66.175	ENSECAG00000001088	LARP1B	67	71.958	Equus_caballus
ENSTGUG00000002098	-	71	55.302	ENSELUG00000023774	larp1b	69	55.392	Esox_lucius
ENSTGUG00000002098	-	54	63.360	ENSFCAG00000014650	-	73	72.539	Felis_catus
ENSTGUG00000002098	-	100	86.249	ENSFALG00000008098	LARP1B	99	84.928	Ficedula_albicollis
ENSTGUG00000002098	-	85	60.304	ENSFHEG00000010264	larp1b	67	60.472	Fundulus_heteroclitus
ENSTGUG00000002098	-	74	69.145	ENSGMOG00000005207	larp1b	59	69.517	Gadus_morhua
ENSTGUG00000002098	-	84	61.864	ENSGAFG00000012012	larp1b	82	60.519	Gambusia_affinis
ENSTGUG00000002098	-	84	58.231	ENSGACG00000004609	larp1b	67	59.041	Gasterosteus_aculeatus
ENSTGUG00000002098	-	100	69.341	ENSGAGG00000017209	LARP1B	80	75.410	Gopherus_agassizii
ENSTGUG00000002098	-	96	66.932	ENSGGOG00000015900	LARP1B	89	69.948	Gorilla_gorilla
ENSTGUG00000002098	-	94	58.603	ENSHBUG00000009730	larp1b	78	57.506	Haplochromis_burtoni
ENSTGUG00000002098	-	79	62.033	ENSHCOG00000000918	larp1b	95	62.631	Hippocampus_comes
ENSTGUG00000002098	-	89	60.645	ENSIPUG00000012138	larp1b	70	59.974	Ictalurus_punctatus
ENSTGUG00000002098	-	79	63.704	ENSKMAG00000011589	larp1b	72	60.870	Kryptolebias_marmoratus
ENSTGUG00000002098	-	90	60.682	ENSLBEG00000005655	larp1b	68	62.034	Labrus_bergylta
ENSTGUG00000002098	-	91	72.360	ENSLACG00000015247	LARP1B	68	72.886	Latimeria_chalumnae
ENSTGUG00000002098	-	91	66.115	ENSLOCG00000010684	larp1b	77	66.113	Lepisosteus_oculatus
ENSTGUG00000002098	-	96	67.691	ENSMFAG00000002218	LARP1B	89	70.687	Macaca_fascicularis
ENSTGUG00000002098	-	96	67.691	ENSMMUG00000021347	LARP1B	89	70.687	Macaca_mulatta
ENSTGUG00000002098	-	96	64.072	ENSMNEG00000030406	LARP1B	95	62.635	Macaca_nemestrina
ENSTGUG00000002098	-	96	68.910	ENSMLEG00000009306	LARP1B	96	67.169	Mandrillus_leucophaeus
ENSTGUG00000002098	-	84	61.687	ENSMAMG00000000081	larp1b	83	57.579	Mastacembelus_armatus
ENSTGUG00000002098	-	80	62.500	ENSMZEG00005002545	larp1b	88	61.615	Maylandia_zebra
ENSTGUG00000002098	-	95	78.947	ENSMGAG00000004809	LARP1B	87	77.778	Meleagris_gallopavo
ENSTGUG00000002098	-	99	67.303	ENSMICG00000036111	LARP1B	91	72.351	Microcebus_murinus
ENSTGUG00000002098	-	54	52.720	ENSMICG00000028052	-	95	51.875	Microcebus_murinus
ENSTGUG00000002098	-	97	68.687	ENSMODG00000012300	LARP1B	79	65.769	Monodelphis_domestica
ENSTGUG00000002098	-	94	59.548	ENSMALG00000003638	larp1b	71	59.203	Monopterus_albus
ENSTGUG00000002098	-	99	65.604	ENSMPUG00000017365	LARP1B	71	70.907	Mustela_putorius_furo
ENSTGUG00000002098	-	88	71.222	ENSMLUG00000010229	LARP1B	87	70.839	Myotis_lucifugus
ENSTGUG00000002098	-	80	57.824	ENSNBRG00000023846	larp1b	71	56.691	Neolamprologus_brichardi
ENSTGUG00000002098	-	96	66.856	ENSNLEG00000013819	LARP1B	89	69.987	Nomascus_leucogenys
ENSTGUG00000002098	-	86	67.579	ENSMEUG00000010308	LARP1B	82	65.994	Notamacropus_eugenii
ENSTGUG00000002098	-	92	59.521	ENSOPRG00000005478	LARP1B	77	68.860	Ochotona_princeps
ENSTGUG00000002098	-	81	60.141	ENSONIG00000012386	larp1b	79	58.984	Oreochromis_niloticus
ENSTGUG00000002098	-	96	66.280	ENSOCUG00000013330	LARP1B	87	70.955	Oryctolagus_cuniculus
ENSTGUG00000002098	-	84	61.473	ENSORLG00000017954	larp1b	79	56.813	Oryzias_latipes
ENSTGUG00000002098	-	84	61.473	ENSORLG00020013081	larp1b	65	60.482	Oryzias_latipes_hni
ENSTGUG00000002098	-	84	61.441	ENSORLG00015009580	larp1b	78	57.020	Oryzias_latipes_hsok
ENSTGUG00000002098	-	84	61.017	ENSOMEG00000004210	larp1b	79	57.125	Oryzias_melastigma
ENSTGUG00000002098	-	95	68.831	ENSOGAG00000005771	LARP1B	85	73.587	Otolemur_garnettii
ENSTGUG00000002098	-	99	64.452	ENSOARG00000015300	LARP1B	91	69.172	Ovis_aries
ENSTGUG00000002098	-	96	66.818	ENSPPAG00000030439	LARP1B	89	69.819	Pan_paniscus
ENSTGUG00000002098	-	54	63.360	ENSPPRG00000002743	-	73	72.539	Panthera_pardus
ENSTGUG00000002098	-	54	63.360	ENSPTIG00000011225	LARP1B	73	72.539	Panthera_tigris_altaica
ENSTGUG00000002098	-	96	66.818	ENSPTRG00000016437	LARP1B	89	69.948	Pan_troglodytes
ENSTGUG00000002098	-	96	67.691	ENSPANG00000012488	LARP1B	89	70.687	Papio_anubis
ENSTGUG00000002098	-	87	54.690	ENSPKIG00000014360	larp1b	73	56.399	Paramormyrops_kingsleyae
ENSTGUG00000002098	-	94	73.008	ENSPSIG00000012885	LARP1B	85	78.514	Pelodiscus_sinensis
ENSTGUG00000002098	-	84	60.482	ENSPMGG00000007207	larp1b	85	59.161	Periophthalmus_magnuspinnatus
ENSTGUG00000002098	-	78	57.020	ENSPMAG00000002700	larp1b	80	53.325	Petromyzon_marinus
ENSTGUG00000002098	-	91	72.468	ENSPCIG00000026516	LARP1B	95	75.414	Phascolarctos_cinereus
ENSTGUG00000002098	-	86	59.546	ENSPFOG00000019519	larp1b	67	58.478	Poecilia_formosa
ENSTGUG00000002098	-	86	61.623	ENSPLAG00000007115	larp1b	66	61.623	Poecilia_latipinna
ENSTGUG00000002098	-	86	60.912	ENSPMEG00000001224	larp1b	70	60.912	Poecilia_mexicana
ENSTGUG00000002098	-	97	64.189	ENSPCAG00000007546	LARP1B	90	68.653	Procavia_capensis
ENSTGUG00000002098	-	87	63.166	ENSPCOG00000021874	LARP1B	90	69.517	Propithecus_coquereli
ENSTGUG00000002098	-	97	62.215	ENSPVAG00000005373	LARP1B	84	66.447	Pteropus_vampyrus
ENSTGUG00000002098	-	80	62.427	ENSPNYG00000017357	larp1b	88	59.887	Pundamilia_nyererei
ENSTGUG00000002098	-	95	58.549	ENSPNAG00000008823	larp1b	72	61.905	Pygocentrus_nattereri
ENSTGUG00000002098	-	53	65.145	ENSRBIG00000039982	-	73	71.618	Rhinopithecus_bieti
ENSTGUG00000002098	-	96	67.577	ENSRROG00000030771	LARP1B	89	70.687	Rhinopithecus_roxellana
ENSTGUG00000002098	-	70	65.554	ENSSHAG00000014474	LARP1B	98	62.957	Sarcophilus_harrisii
ENSTGUG00000002098	-	92	58.997	ENSSMAG00000006347	larp1b	79	59.452	Scophthalmus_maximus
ENSTGUG00000002098	-	91	60.658	ENSSDUG00000004182	larp1b	70	59.198	Seriola_dumerili
ENSTGUG00000002098	-	83	59.652	ENSSLDG00000014613	larp1b	71	58.228	Seriola_lalandi_dorsalis
ENSTGUG00000002098	-	98	62.967	ENSSPUG00000011837	LARP1B	88	64.639	Sphenodon_punctatus
ENSTGUG00000002098	-	84	62.079	ENSSPAG00000017772	larp1b	74	57.875	Stegastes_partitus
ENSTGUG00000002098	-	97	65.865	ENSSSCG00000034280	LARP1B	97	90.110	Sus_scrofa
ENSTGUG00000002098	-	84	61.669	ENSTRUG00000005612	larp1b	69	60.979	Takifugu_rubripes
ENSTGUG00000002098	-	80	63.418	ENSTNIG00000012398	larp1b	73	63.268	Tetraodon_nigroviridis
ENSTGUG00000002098	-	82	60.961	ENSTBEG00000004177	LARP1B	67	65.845	Tupaia_belangeri
ENSTGUG00000002098	-	93	65.261	ENSTTRG00000012984	LARP1B	85	64.413	Tursiops_truncatus
ENSTGUG00000002098	-	99	66.224	ENSUMAG00000007373	LARP1B	86	70.943	Ursus_maritimus
ENSTGUG00000002098	-	89	63.014	ENSVPAG00000007223	LARP1B	79	71.512	Vicugna_pacos
ENSTGUG00000002098	-	99	65.824	ENSVVUG00000011307	LARP1B	91	71.467	Vulpes_vulpes
ENSTGUG00000002098	-	90	62.516	ENSXETG00000022512	larp1b	73	62.988	Xenopus_tropicalis
ENSTGUG00000002098	-	80	59.254	ENSXCOG00000004435	larp1b	73	58.466	Xiphophorus_couchianus
ENSTGUG00000002098	-	84	62.166	ENSXMAG00000008150	larp1b	70	58.322	Xiphophorus_maculatus