EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000002286 (Gene tree)
Gene ID: 100222892
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 15142 bases
Position: chr1A:6023167-6038308
Accession: 100222892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000002362	PRP4	PF08799.11	1.3e-13	1	1
ENSTGUP00000002362	Prp18	PF02840.15	1.3e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002383	-	1578	XM_002192837	ENSTGUP00000002362	342 (aa)	XP_002192873	H0YVP1

Gene Model

Click here to download ENSTGUG00000002286's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000002286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000002286	-	100	92.398	ENSG00000165630	PRPF18	100	92.398	Homo_sapiens
ENSTGUG00000002286	-	100	84.211	ENSAPOG00000024177	prpf18	100	84.211	Acanthochromis_polyacanthus
ENSTGUG00000002286	-	100	91.813	ENSAMEG00000013591	-	100	91.813	Ailuropoda_melanoleuca
ENSTGUG00000002286	-	100	83.918	ENSACIG00000001186	prpf18	100	83.918	Amphilophus_citrinellus
ENSTGUG00000002286	-	98	83.881	ENSAOCG00000006572	prpf18	94	82.164	Amphiprion_ocellaris
ENSTGUG00000002286	-	100	84.211	ENSAPEG00000004564	prpf18	100	84.211	Amphiprion_percula
ENSTGUG00000002286	-	100	82.749	ENSATEG00000000303	prpf18	100	82.749	Anabas_testudineus
ENSTGUG00000002286	-	99	97.059	ENSAPLG00000003387	-	99	97.059	Anas_platyrhynchos
ENSTGUG00000002286	-	100	92.442	ENSACAG00000000818	-	100	92.442	Anolis_carolinensis
ENSTGUG00000002286	-	100	92.398	ENSANAG00000037445	-	100	92.398	Aotus_nancymaae
ENSTGUG00000002286	-	100	83.333	ENSACLG00000026296	prpf18	100	83.333	Astatotilapia_calliptera
ENSTGUG00000002286	-	100	83.714	ENSAMXG00000012848	prpf18	100	83.714	Astyanax_mexicanus
ENSTGUG00000002286	-	100	91.520	ENSBTAG00000017244	PRPF18	100	91.520	Bos_taurus
ENSTGUG00000002286	-	97	38.218	WBGene00009320	F32B6.3	96	38.081	Caenorhabditis_elegans
ENSTGUG00000002286	-	100	92.398	ENSCJAG00000009432	-	100	92.398	Callithrix_jacchus
ENSTGUG00000002286	-	100	91.813	ENSCAFG00000004735	-	100	91.813	Canis_familiaris
ENSTGUG00000002286	-	100	91.813	ENSCAFG00020007712	-	100	91.813	Canis_lupus_dingo
ENSTGUG00000002286	-	100	91.520	ENSCHIG00000000499	-	100	91.520	Capra_hircus
ENSTGUG00000002286	-	100	91.520	ENSTSYG00000003517	-	100	91.520	Carlito_syrichta
ENSTGUG00000002286	-	100	92.398	ENSCPOG00000021069	-	100	92.398	Cavia_porcellus
ENSTGUG00000002286	-	100	92.398	ENSCCAG00000036822	-	100	92.398	Cebus_capucinus
ENSTGUG00000002286	-	100	81.579	ENSCATG00000016633	-	100	81.579	Cercocebus_atys
ENSTGUG00000002286	-	100	91.813	ENSCLAG00000011770	-	100	91.813	Chinchilla_lanigera
ENSTGUG00000002286	-	100	90.028	ENSCSAG00000013109	-	100	90.028	Chlorocebus_sabaeus
ENSTGUG00000002286	-	100	90.449	ENSCPBG00000003100	-	100	91.011	Chrysemys_picta_bellii
ENSTGUG00000002286	-	99	56.433	ENSCING00000020481	-	97	54.913	Ciona_intestinalis
ENSTGUG00000002286	-	99	54.942	ENSCSAVG00000010546	-	99	55.132	Ciona_savignyi
ENSTGUG00000002286	-	100	92.105	ENSCANG00000034900	-	100	92.105	Colobus_angolensis_palliatus
ENSTGUG00000002286	-	100	92.398	ENSCGRG00001023665	Prpf18	100	92.398	Cricetulus_griseus_chok1gshd
ENSTGUG00000002286	-	100	92.398	ENSCGRG00000014690	Prpf18	100	92.398	Cricetulus_griseus_crigri
ENSTGUG00000002286	-	100	81.579	ENSCSEG00000005536	prpf18	99	81.579	Cynoglossus_semilaevis
ENSTGUG00000002286	-	100	82.749	ENSCVAG00000012401	prpf18	100	82.749	Cyprinodon_variegatus
ENSTGUG00000002286	-	100	84.503	ENSDARG00000058306	prpf18	100	84.503	Danio_rerio
ENSTGUG00000002286	-	100	92.105	ENSDNOG00000035607	-	100	92.105	Dasypus_novemcinctus
ENSTGUG00000002286	-	100	91.520	ENSDORG00000000858	Prpf18	100	91.520	Dipodomys_ordii
ENSTGUG00000002286	-	99	51.327	FBgn0027784	Prp18	98	51.327	Drosophila_melanogaster
ENSTGUG00000002286	-	100	82.164	ENSETEG00000015060	-	100	82.164	Echinops_telfairi
ENSTGUG00000002286	-	100	67.435	ENSEBUG00000016502	prpf18	99	66.859	Eptatretus_burgeri
ENSTGUG00000002286	-	100	92.105	ENSEASG00005019373	-	100	92.105	Equus_asinus_asinus
ENSTGUG00000002286	-	100	92.105	ENSECAG00000006997	PRPF18	100	92.105	Equus_caballus
ENSTGUG00000002286	-	92	57.595	ENSEEUG00000001171	-	100	57.595	Erinaceus_europaeus
ENSTGUG00000002286	-	100	81.050	ENSELUG00000022190	prpf18	100	81.050	Esox_lucius
ENSTGUG00000002286	-	100	91.813	ENSFCAG00000004436	-	100	91.813	Felis_catus
ENSTGUG00000002286	-	92	97.231	ENSFALG00000001912	-	97	97.231	Ficedula_albicollis
ENSTGUG00000002286	-	99	60.870	ENSFDAG00000010713	-	97	60.870	Fukomys_damarensis
ENSTGUG00000002286	-	93	94.671	ENSFDAG00000014026	-	99	94.671	Fukomys_damarensis
ENSTGUG00000002286	-	80	87.912	ENSFHEG00000020125	prpf18	98	88.015	Fundulus_heteroclitus
ENSTGUG00000002286	-	99	79.179	ENSGMOG00000012210	prpf18	99	79.179	Gadus_morhua
ENSTGUG00000002286	-	100	98.246	ENSGALG00000043593	-	100	98.246	Gallus_gallus
ENSTGUG00000002286	-	100	82.164	ENSGAFG00000006034	prpf18	100	82.164	Gambusia_affinis
ENSTGUG00000002286	-	100	79.532	ENSGACG00000012232	prpf18	100	79.532	Gasterosteus_aculeatus
ENSTGUG00000002286	-	100	94.152	ENSGAGG00000016878	-	100	94.152	Gopherus_agassizii
ENSTGUG00000002286	-	92	91.772	ENSGGOG00000025188	-	96	91.772	Gorilla_gorilla
ENSTGUG00000002286	-	100	83.333	ENSHBUG00000010264	prpf18	100	83.333	Haplochromis_burtoni
ENSTGUG00000002286	-	100	91.813	ENSHGLG00000018534	PRPF18	100	91.813	Heterocephalus_glaber_female
ENSTGUG00000002286	-	93	94.357	ENSHGLG00100012161	-	98	94.357	Heterocephalus_glaber_male
ENSTGUG00000002286	-	100	83.041	ENSHCOG00000015987	prpf18	100	83.041	Hippocampus_comes
ENSTGUG00000002286	-	100	81.870	ENSIPUG00000007432	prpf18	100	83.286	Ictalurus_punctatus
ENSTGUG00000002286	-	100	91.813	ENSSTOG00000008735	-	100	91.813	Ictidomys_tridecemlineatus
ENSTGUG00000002286	-	100	92.398	ENSJJAG00000024041	-	100	92.398	Jaculus_jaculus
ENSTGUG00000002286	-	100	66.571	ENSJJAG00000015191	-	100	66.764	Jaculus_jaculus
ENSTGUG00000002286	-	100	82.749	ENSKMAG00000012124	prpf18	100	82.749	Kryptolebias_marmoratus
ENSTGUG00000002286	-	96	82.875	ENSLBEG00000028466	prpf18	98	81.682	Labrus_bergylta
ENSTGUG00000002286	-	100	87.719	ENSLACG00000009885	prpf18	100	87.719	Latimeria_chalumnae
ENSTGUG00000002286	-	100	89.181	ENSLOCG00000016736	prpf18	100	89.181	Lepisosteus_oculatus
ENSTGUG00000002286	-	100	92.398	ENSLAFG00000007753	-	100	92.398	Loxodonta_africana
ENSTGUG00000002286	-	100	92.398	ENSMFAG00000000540	-	100	92.398	Macaca_fascicularis
ENSTGUG00000002286	-	100	92.398	ENSMMUG00000015071	PRPF18	100	92.398	Macaca_mulatta
ENSTGUG00000002286	-	100	92.398	ENSMNEG00000024679	-	100	92.398	Macaca_nemestrina
ENSTGUG00000002286	-	100	77.193	ENSMLEG00000031715	-	100	77.193	Mandrillus_leucophaeus
ENSTGUG00000002286	-	100	83.041	ENSMAMG00000006610	prpf18	100	83.041	Mastacembelus_armatus
ENSTGUG00000002286	-	100	83.333	ENSMZEG00005019392	prpf18	100	83.333	Maylandia_zebra
ENSTGUG00000002286	-	100	98.246	ENSMGAG00000005023	-	100	98.246	Meleagris_gallopavo
ENSTGUG00000002286	-	100	92.105	ENSMICG00000006572	-	100	92.105	Microcebus_murinus
ENSTGUG00000002286	-	100	92.398	ENSMOCG00000021468	Prpf18	100	92.398	Microtus_ochrogaster
ENSTGUG00000002286	-	100	83.333	ENSMMOG00000013012	prpf18	100	83.333	Mola_mola
ENSTGUG00000002286	-	96	87.574	ENSMODG00000016902	-	92	87.574	Monodelphis_domestica
ENSTGUG00000002286	-	100	81.579	ENSMODG00000024043	-	100	81.579	Monodelphis_domestica
ENSTGUG00000002286	-	100	76.093	ENSMALG00000005486	prpf18	100	76.676	Monopterus_albus
ENSTGUG00000002286	-	100	91.813	MGP_CAROLIEiJ_G0023143	Prpf18	100	97.260	Mus_caroli
ENSTGUG00000002286	-	100	91.520	ENSMUSG00000039449	Prpf18	100	97.260	Mus_musculus
ENSTGUG00000002286	-	100	92.105	MGP_PahariEiJ_G0019203	Prpf18	100	97.260	Mus_pahari
ENSTGUG00000002286	-	100	91.228	MGP_SPRETEiJ_G0024061	Prpf18	100	97.260	Mus_spretus
ENSTGUG00000002286	-	100	91.520	ENSMPUG00000000938	-	100	91.520	Mustela_putorius_furo
ENSTGUG00000002286	-	100	91.520	ENSMLUG00000009200	-	100	91.520	Myotis_lucifugus
ENSTGUG00000002286	-	100	91.813	ENSNGAG00000012500	-	100	91.813	Nannospalax_galili
ENSTGUG00000002286	-	67	88.261	ENSNGAG00000023550	-	82	88.261	Nannospalax_galili
ENSTGUG00000002286	-	100	83.333	ENSNBRG00000001778	prpf18	100	83.333	Neolamprologus_brichardi
ENSTGUG00000002286	-	100	92.398	ENSNLEG00000012186	-	100	92.398	Nomascus_leucogenys
ENSTGUG00000002286	-	100	64.035	ENSMEUG00000005032	-	100	64.035	Notamacropus_eugenii
ENSTGUG00000002286	-	77	73.208	ENSOPRG00000002153	-	100	73.208	Ochotona_princeps
ENSTGUG00000002286	-	100	92.105	ENSODEG00000003770	-	100	92.105	Octodon_degus
ENSTGUG00000002286	-	98	82.687	ENSONIG00000014854	prpf18	96	82.687	Oreochromis_niloticus
ENSTGUG00000002286	-	100	91.813	ENSOANG00000015404	-	100	91.813	Ornithorhynchus_anatinus
ENSTGUG00000002286	-	100	92.105	ENSOCUG00000027756	-	93	94.671	Oryctolagus_cuniculus
ENSTGUG00000002286	-	100	81.143	ENSORLG00000010293	prpf18	100	81.143	Oryzias_latipes
ENSTGUG00000002286	-	100	82.749	ENSORLG00020001530	prpf18	100	82.749	Oryzias_latipes_hni
ENSTGUG00000002286	-	100	82.456	ENSORLG00015013705	prpf18	100	82.456	Oryzias_latipes_hsok
ENSTGUG00000002286	-	100	84.503	ENSOMEG00000009167	prpf18	100	84.503	Oryzias_melastigma
ENSTGUG00000002286	-	100	91.520	ENSOGAG00000007294	-	100	91.520	Otolemur_garnettii
ENSTGUG00000002286	-	100	89.174	ENSOARG00000006243	-	100	89.174	Ovis_aries
ENSTGUG00000002286	-	100	92.398	ENSPPAG00000041959	-	100	92.398	Pan_paniscus
ENSTGUG00000002286	-	100	91.813	ENSPPRG00000000107	-	100	91.813	Panthera_pardus
ENSTGUG00000002286	-	100	92.105	ENSPTIG00000021094	-	100	92.105	Panthera_tigris_altaica
ENSTGUG00000002286	-	100	92.398	ENSPTRG00000002306	PRPF18	100	92.398	Pan_troglodytes
ENSTGUG00000002286	-	100	92.105	ENSPANG00000023346	-	100	92.105	Papio_anubis
ENSTGUG00000002286	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.051	Paramormyrops_kingsleyae
ENSTGUG00000002286	-	100	94.737	ENSPSIG00000016064	-	100	94.737	Pelodiscus_sinensis
ENSTGUG00000002286	-	100	78.655	ENSPMGG00000016486	prpf18	100	78.655	Periophthalmus_magnuspinnatus
ENSTGUG00000002286	-	100	92.105	ENSPEMG00000013704	Prpf18	100	92.105	Peromyscus_maniculatus_bairdii
ENSTGUG00000002286	-	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSTGUG00000002286	-	92	92.722	ENSPCIG00000012963	-	99	92.722	Phascolarctos_cinereus
ENSTGUG00000002286	-	100	80.571	ENSPFOG00000017611	prpf18	100	80.571	Poecilia_formosa
ENSTGUG00000002286	-	100	82.164	ENSPLAG00000000369	prpf18	100	82.164	Poecilia_latipinna
ENSTGUG00000002286	-	100	82.164	ENSPMEG00000005183	prpf18	100	82.164	Poecilia_mexicana
ENSTGUG00000002286	-	100	82.456	ENSPREG00000015232	prpf18	100	82.456	Poecilia_reticulata
ENSTGUG00000002286	-	100	92.105	ENSPPYG00000002101	PRPF18	100	92.105	Pongo_abelii
ENSTGUG00000002286	-	100	74.269	ENSPCAG00000010833	-	100	74.269	Procavia_capensis
ENSTGUG00000002286	-	100	85.380	ENSPCOG00000013057	-	100	85.380	Propithecus_coquereli
ENSTGUG00000002286	-	100	56.140	ENSPVAG00000002947	-	100	56.140	Pteropus_vampyrus
ENSTGUG00000002286	-	100	83.041	ENSPNYG00000003554	prpf18	100	83.041	Pundamilia_nyererei
ENSTGUG00000002286	-	100	84.615	ENSPNAG00000023151	prpf18	100	84.615	Pygocentrus_nattereri
ENSTGUG00000002286	-	100	91.813	ENSRNOG00000018396	Prpf18	100	91.813	Rattus_norvegicus
ENSTGUG00000002286	-	100	91.813	ENSRBIG00000028028	-	100	91.813	Rhinopithecus_bieti
ENSTGUG00000002286	-	100	92.105	ENSRROG00000040695	-	100	92.105	Rhinopithecus_roxellana
ENSTGUG00000002286	-	100	92.398	ENSSBOG00000034482	-	100	92.398	Saimiri_boliviensis_boliviensis
ENSTGUG00000002286	-	100	92.982	ENSSHAG00000016463	-	100	92.982	Sarcophilus_harrisii
ENSTGUG00000002286	-	100	76.023	ENSSHAG00000009669	-	100	76.023	Sarcophilus_harrisii
ENSTGUG00000002286	-	77	44.528	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSTGUG00000002286	-	98	83.478	ENSSFOG00015022118	prpf18	100	77.810	Scleropages_formosus
ENSTGUG00000002286	-	100	80.994	ENSSMAG00000005308	prpf18	100	80.994	Scophthalmus_maximus
ENSTGUG00000002286	-	100	83.041	ENSSDUG00000015428	prpf18	100	83.041	Seriola_dumerili
ENSTGUG00000002286	-	100	83.041	ENSSLDG00000023989	prpf18	100	83.041	Seriola_lalandi_dorsalis
ENSTGUG00000002286	-	100	63.158	ENSSARG00000005307	-	100	63.158	Sorex_araneus
ENSTGUG00000002286	-	100	93.567	ENSSPUG00000002619	-	100	93.567	Sphenodon_punctatus
ENSTGUG00000002286	-	100	83.041	ENSSPAG00000019502	prpf18	100	83.041	Stegastes_partitus
ENSTGUG00000002286	-	100	91.813	ENSSSCG00000026354	-	100	91.813	Sus_scrofa
ENSTGUG00000002286	-	100	83.333	ENSTRUG00000011278	prpf18	100	83.333	Takifugu_rubripes
ENSTGUG00000002286	-	100	84.503	ENSTNIG00000000911	prpf18	100	84.503	Tetraodon_nigroviridis
ENSTGUG00000002286	-	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSTGUG00000002286	-	100	92.690	ENSTTRG00000011117	PRPF18	100	92.690	Tursiops_truncatus
ENSTGUG00000002286	-	91	94.212	ENSUAMG00000001815	-	93	94.212	Ursus_americanus
ENSTGUG00000002286	-	100	87.135	ENSUMAG00000012329	-	100	87.135	Ursus_maritimus
ENSTGUG00000002286	-	100	86.257	ENSVPAG00000011486	-	100	86.257	Vicugna_pacos
ENSTGUG00000002286	-	100	91.813	ENSVVUG00000005453	-	100	91.813	Vulpes_vulpes
ENSTGUG00000002286	-	100	80.870	ENSXETG00000024057	prpf18	100	80.870	Xenopus_tropicalis
ENSTGUG00000002286	-	100	81.105	ENSXCOG00000020414	prpf18	100	81.105	Xiphophorus_couchianus
ENSTGUG00000002286	-	100	81.871	ENSXMAG00000004713	prpf18	91	81.871	Xiphophorus_maculatus