EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000002300 (Gene tree)
Gene ID: -
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 6208 bases
Position: chr27:1922983-1929190
Accession: 17040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000002373	Btz	PF09405.10	6.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002395	CASC3-201	1569	-	ENSTGUP00000002373	523 (aa)	-	H0YVQ2

Gene Model

Click here to download ENSTGUG00000002300's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03013	RNA transport	KEGG
tgu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000002300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000002300	CASC3	99	73.333	ENSG00000108349	CASC3	74	73.624	Homo_sapiens
ENSTGUG00000002300	CASC3	76	67.708	ENSAPOG00000008467	casc3	73	44.103	Acanthochromis_polyacanthus
ENSTGUG00000002300	CASC3	99	75.189	ENSAMEG00000007764	CASC3	74	75.189	Ailuropoda_melanoleuca
ENSTGUG00000002300	CASC3	99	47.793	ENSACIG00000000720	casc3	78	46.341	Amphilophus_citrinellus
ENSTGUG00000002300	CASC3	76	68.085	ENSATEG00000017196	casc3	50	68.085	Anabas_testudineus
ENSTGUG00000002300	CASC3	100	73.783	ENSACAG00000002674	CASC3	73	74.157	Anolis_carolinensis
ENSTGUG00000002300	CASC3	53	91.429	ENSANAG00000031954	-	60	91.429	Aotus_nancymaae
ENSTGUG00000002300	CASC3	99	69.202	ENSANAG00000034820	-	77	70.152	Aotus_nancymaae
ENSTGUG00000002300	CASC3	99	74.905	ENSBTAG00000006250	CASC3	75	74.905	Bos_taurus
ENSTGUG00000002300	CASC3	99	72.624	ENSCJAG00000016032	CASC3	75	72.624	Callithrix_jacchus
ENSTGUG00000002300	CASC3	99	74.095	ENSCAFG00000016141	CASC3	74	74.905	Canis_familiaris
ENSTGUG00000002300	CASC3	99	74.095	ENSCAFG00020018882	CASC3	74	74.905	Canis_lupus_dingo
ENSTGUG00000002300	CASC3	99	74.905	ENSCHIG00000006338	CASC3	75	74.905	Capra_hircus
ENSTGUG00000002300	CASC3	99	73.473	ENSTSYG00000002975	CASC3	74	74.335	Carlito_syrichta
ENSTGUG00000002300	CASC3	99	72.571	ENSCAPG00000010514	CASC3	85	72.865	Cavia_aperea
ENSTGUG00000002300	CASC3	99	72.571	ENSCPOG00000015139	CASC3	75	72.296	Cavia_porcellus
ENSTGUG00000002300	CASC3	99	73.055	ENSCCAG00000033620	CASC3	75	73.245	Cebus_capucinus
ENSTGUG00000002300	CASC3	99	73.143	ENSCATG00000033593	CASC3	74	73.435	Cercocebus_atys
ENSTGUG00000002300	CASC3	99	72.571	ENSCLAG00000013730	CASC3	74	72.624	Chinchilla_lanigera
ENSTGUG00000002300	CASC3	99	73.333	ENSCSAG00000002777	CASC3	74	73.435	Chlorocebus_sabaeus
ENSTGUG00000002300	CASC3	99	81.766	ENSCPBG00000004750	CASC3	80	81.453	Chrysemys_picta_bellii
ENSTGUG00000002300	CASC3	99	73.333	ENSCANG00000008814	CASC3	75	73.435	Colobus_angolensis_palliatus
ENSTGUG00000002300	CASC3	99	72.486	ENSCGRG00001014706	Casc3	75	72.676	Cricetulus_griseus_chok1gshd
ENSTGUG00000002300	CASC3	99	72.486	ENSCGRG00000001952	Casc3	80	72.676	Cricetulus_griseus_crigri
ENSTGUG00000002300	CASC3	79	65.957	ENSCSEG00000010047	casc3	50	68.085	Cynoglossus_semilaevis
ENSTGUG00000002300	CASC3	58	54.777	ENSCVAG00000014935	casc3	74	46.783	Cyprinodon_variegatus
ENSTGUG00000002300	CASC3	99	73.485	ENSDNOG00000017249	CASC3	71	73.485	Dasypus_novemcinctus
ENSTGUG00000002300	CASC3	99	68.190	ENSETEG00000013720	CASC3	74	68.821	Echinops_telfairi
ENSTGUG00000002300	CASC3	99	35.135	ENSEBUG00000010654	casc3	76	36.426	Eptatretus_burgeri
ENSTGUG00000002300	CASC3	99	74.621	ENSEASG00005002909	CASC3	74	74.621	Equus_asinus_asinus
ENSTGUG00000002300	CASC3	99	74.811	ENSECAG00000019947	CASC3	65	74.811	Equus_caballus
ENSTGUG00000002300	CASC3	63	66.962	ENSEEUG00000014253	CASC3	65	66.962	Erinaceus_europaeus
ENSTGUG00000002300	CASC3	99	47.878	ENSELUG00000015093	casc3	75	46.350	Esox_lucius
ENSTGUG00000002300	CASC3	99	74.763	ENSFCAG00000014998	CASC3	74	74.763	Felis_catus
ENSTGUG00000002300	CASC3	99	93.058	ENSFALG00000000412	CASC3	82	92.683	Ficedula_albicollis
ENSTGUG00000002300	CASC3	99	71.619	ENSFDAG00000020696	CASC3	80	71.537	Fukomys_damarensis
ENSTGUG00000002300	CASC3	99	88.269	ENSGALG00000031813	CASC3	79	87.931	Gallus_gallus
ENSTGUG00000002300	CASC3	80	65.766	ENSGAFG00000017148	casc3	51	56.291	Gambusia_affinis
ENSTGUG00000002300	CASC3	100	80.529	ENSGAGG00000008432	CASC3	80	80.529	Gopherus_agassizii
ENSTGUG00000002300	CASC3	99	73.333	ENSGGOG00000005067	CASC3	75	73.624	Gorilla_gorilla
ENSTGUG00000002300	CASC3	80	68.627	ENSHBUG00000013155	casc3	74	43.824	Haplochromis_burtoni
ENSTGUG00000002300	CASC3	99	72.137	ENSHGLG00000012117	CASC3	74	72.137	Heterocephalus_glaber_female
ENSTGUG00000002300	CASC3	99	72.137	ENSHGLG00100002268	CASC3	83	72.137	Heterocephalus_glaber_male
ENSTGUG00000002300	CASC3	99	42.487	ENSHCOG00000002664	casc3	73	41.105	Hippocampus_comes
ENSTGUG00000002300	CASC3	99	49.645	ENSIPUG00000002679	casc3	73	49.113	Ictalurus_punctatus
ENSTGUG00000002300	CASC3	99	73.435	ENSSTOG00000006374	CASC3	74	73.435	Ictidomys_tridecemlineatus
ENSTGUG00000002300	CASC3	99	72.243	ENSJJAG00000023525	Casc3	75	72.538	Jaculus_jaculus
ENSTGUG00000002300	CASC3	65	65.385	ENSKMAG00000019507	casc3	77	45.572	Kryptolebias_marmoratus
ENSTGUG00000002300	CASC3	98	63.931	ENSLACG00000013200	CASC3	72	62.214	Latimeria_chalumnae
ENSTGUG00000002300	CASC3	99	73.524	ENSLAFG00000000606	CASC3	74	74.335	Loxodonta_africana
ENSTGUG00000002300	CASC3	99	73.143	ENSMFAG00000041496	CASC3	74	73.435	Macaca_fascicularis
ENSTGUG00000002300	CASC3	99	73.333	ENSMMUG00000045187	CASC3	74	73.435	Macaca_mulatta
ENSTGUG00000002300	CASC3	99	73.333	ENSMLEG00000029049	CASC3	82	73.435	Mandrillus_leucophaeus
ENSTGUG00000002300	CASC3	77	67.327	ENSMAMG00000005235	casc3	57	56.129	Mastacembelus_armatus
ENSTGUG00000002300	CASC3	98	88.178	ENSMGAG00000013247	CASC3	84	88.168	Meleagris_gallopavo
ENSTGUG00000002300	CASC3	96	72.079	ENSMAUG00000006023	Casc3	80	72.079	Mesocricetus_auratus
ENSTGUG00000002300	CASC3	99	73.384	ENSMICG00000003321	CASC3	74	73.384	Microcebus_murinus
ENSTGUG00000002300	CASC3	99	72.486	ENSMOCG00000013644	Casc3	74	71.537	Microtus_ochrogaster
ENSTGUG00000002300	CASC3	59	52.050	ENSMMOG00000014339	casc3	74	42.637	Mola_mola
ENSTGUG00000002300	CASC3	99	71.238	ENSMODG00000013044	CASC3	69	71.238	Monodelphis_domestica
ENSTGUG00000002300	CASC3	99	72.190	MGP_CAROLIEiJ_G0017099	Casc3	74	72.190	Mus_caroli
ENSTGUG00000002300	CASC3	99	71.619	ENSMUSG00000078676	Casc3	74	71.619	Mus_musculus
ENSTGUG00000002300	CASC3	99	72.000	MGP_SPRETEiJ_G0017943	Casc3	74	72.000	Mus_spretus
ENSTGUG00000002300	CASC3	99	74.621	ENSMPUG00000014903	CASC3	74	74.621	Mustela_putorius_furo
ENSTGUG00000002300	CASC3	99	73.485	ENSMLUG00000010520	CASC3	75	73.485	Myotis_lucifugus
ENSTGUG00000002300	CASC3	99	71.810	ENSNGAG00000023121	Casc3	77	71.810	Nannospalax_galili
ENSTGUG00000002300	CASC3	99	72.571	ENSNLEG00000001598	CASC3	75	72.296	Nomascus_leucogenys
ENSTGUG00000002300	CASC3	99	72.000	ENSODEG00000017858	CASC3	74	72.000	Octodon_degus
ENSTGUG00000002300	CASC3	61	52.012	ENSONIG00000009337	casc3	75	46.816	Oreochromis_niloticus
ENSTGUG00000002300	CASC3	91	45.473	ENSOANG00000003499	-	82	45.473	Ornithorhynchus_anatinus
ENSTGUG00000002300	CASC3	99	74.432	ENSOCUG00000002954	CASC3	74	74.432	Oryctolagus_cuniculus
ENSTGUG00000002300	CASC3	59	50.162	ENSORLG00000023125	casc3	59	54.167	Oryzias_latipes
ENSTGUG00000002300	CASC3	99	72.467	ENSOGAG00000034486	CASC3	73	73.194	Otolemur_garnettii
ENSTGUG00000002300	CASC3	99	75.095	ENSOARG00000013239	CASC3	74	75.095	Ovis_aries
ENSTGUG00000002300	CASC3	99	73.333	ENSPPAG00000035069	CASC3	75	73.624	Pan_paniscus
ENSTGUG00000002300	CASC3	99	74.763	ENSPPRG00000023670	CASC3	74	74.763	Panthera_pardus
ENSTGUG00000002300	CASC3	99	74.573	ENSPTIG00000010891	CASC3	74	74.573	Panthera_tigris_altaica
ENSTGUG00000002300	CASC3	99	73.143	ENSPANG00000021708	CASC3	75	73.435	Papio_anubis
ENSTGUG00000002300	CASC3	99	49.057	ENSPKIG00000023186	casc3	74	47.811	Paramormyrops_kingsleyae
ENSTGUG00000002300	CASC3	99	73.624	ENSPEMG00000009774	Casc3	75	73.624	Peromyscus_maniculatus_bairdii
ENSTGUG00000002300	CASC3	99	74.618	ENSPCIG00000025678	CASC3	75	75.665	Phascolarctos_cinereus
ENSTGUG00000002300	CASC3	98	47.541	ENSPFOG00000017632	casc3	95	41.034	Poecilia_formosa
ENSTGUG00000002300	CASC3	81	65.766	ENSPLAG00000005268	casc3	75	44.352	Poecilia_latipinna
ENSTGUG00000002300	CASC3	86	43.413	ENSPMEG00000010299	casc3	68	45.131	Poecilia_mexicana
ENSTGUG00000002300	CASC3	61	52.147	ENSPREG00000011856	casc3	77	46.481	Poecilia_reticulata
ENSTGUG00000002300	CASC3	99	72.571	ENSPPYG00000008467	CASC3	74	74.004	Pongo_abelii
ENSTGUG00000002300	CASC3	99	72.190	ENSPCOG00000008183	CASC3	74	72.865	Propithecus_coquereli
ENSTGUG00000002300	CASC3	99	73.282	ENSPVAG00000008556	CASC3	74	74.525	Pteropus_vampyrus
ENSTGUG00000002300	CASC3	99	48.376	ENSPNAG00000015928	casc3	75	47.700	Pygocentrus_nattereri
ENSTGUG00000002300	CASC3	99	67.748	ENSRNOG00000009716	Casc3	72	67.366	Rattus_norvegicus
ENSTGUG00000002300	CASC3	99	73.524	ENSRBIG00000033289	CASC3	75	73.624	Rhinopithecus_bieti
ENSTGUG00000002300	CASC3	99	73.524	ENSRROG00000022337	CASC3	75	73.624	Rhinopithecus_roxellana
ENSTGUG00000002300	CASC3	99	72.624	ENSSBOG00000031406	CASC3	83	73.194	Saimiri_boliviensis_boliviensis
ENSTGUG00000002300	CASC3	99	74.618	ENSSHAG00000013338	CASC3	84	75.856	Sarcophilus_harrisii
ENSTGUG00000002300	CASC3	99	47.492	ENSSFOG00015002645	casc3	75	49.153	Scleropages_formosus
ENSTGUG00000002300	CASC3	90	65.263	ENSSMAG00000016096	casc3	50	64.286	Scophthalmus_maximus
ENSTGUG00000002300	CASC3	61	48.649	ENSSDUG00000016893	casc3	55	55.970	Seriola_dumerili
ENSTGUG00000002300	CASC3	76	73.750	ENSSLDG00000020308	casc3	63	73.750	Seriola_lalandi_dorsalis
ENSTGUG00000002300	CASC3	99	64.000	ENSSARG00000010378	CASC3	86	63.947	Sorex_araneus
ENSTGUG00000002300	CASC3	99	73.905	ENSSSCG00000017477	CASC3	82	74.715	Sus_scrofa
ENSTGUG00000002300	CASC3	58	52.215	ENSTRUG00000000673	casc3	52	64.356	Takifugu_rubripes
ENSTGUG00000002300	CASC3	99	46.533	ENSTNIG00000003208	casc3	75	46.382	Tetraodon_nigroviridis
ENSTGUG00000002300	CASC3	99	62.667	ENSTTRG00000016896	CASC3	86	63.498	Tursiops_truncatus
ENSTGUG00000002300	CASC3	99	74.621	ENSUAMG00000015116	CASC3	74	74.621	Ursus_americanus
ENSTGUG00000002300	CASC3	99	74.432	ENSUMAG00000017697	CASC3	84	74.432	Ursus_maritimus
ENSTGUG00000002300	CASC3	82	88.034	ENSVPAG00000000799	CASC3	61	88.034	Vicugna_pacos
ENSTGUG00000002300	CASC3	99	74.095	ENSVVUG00000000997	CASC3	74	74.905	Vulpes_vulpes
ENSTGUG00000002300	CASC3	99	59.810	ENSXETG00000024395	casc3	75	59.429	Xenopus_tropicalis
ENSTGUG00000002300	CASC3	81	65.766	ENSXMAG00000013937	casc3	68	48.765	Xiphophorus_maculatus