EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000002331 (Gene tree)
Gene ID: 100222920
Gene Symbol: RIOK1
Alias: AD034|FLJ30006|RRP10|bA288G3.1
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 15766 bases
Position: chr2:44901816-44917581
Accession: 100222920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000002412	RIO1	PF01163.22	6.8e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002435	RIOK1-201	1707	XM_002199774	ENSTGUP00000002412	568 (aa)	XP_002199810	H0YVU0

Gene Model

Click here to download ENSTGUG00000002331's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000002331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000002331	RIOK1	100	77.178	ENSG00000124784	RIOK1	100	76.789	Homo_sapiens
ENSTGUG00000002331	RIOK1	57	66.254	ENSAPOG00000015632	riok1	99	67.183	Acanthochromis_polyacanthus
ENSTGUG00000002331	RIOK1	100	78.459	ENSAMEG00000017367	RIOK1	100	78.032	Ailuropoda_melanoleuca
ENSTGUG00000002331	RIOK1	88	71.800	ENSACIG00000003735	riok1	87	72.709	Amphilophus_citrinellus
ENSTGUG00000002331	RIOK1	99	66.132	ENSAOCG00000011818	riok1	100	65.836	Amphiprion_ocellaris
ENSTGUG00000002331	RIOK1	99	66.310	ENSAPEG00000001345	riok1	100	65.905	Amphiprion_percula
ENSTGUG00000002331	RIOK1	81	72.727	ENSATEG00000006594	riok1	99	72.727	Anabas_testudineus
ENSTGUG00000002331	RIOK1	84	92.632	ENSAPLG00000004196	RIOK1	100	91.368	Anas_platyrhynchos
ENSTGUG00000002331	RIOK1	100	78.169	ENSACAG00000000695	RIOK1	100	77.817	Anolis_carolinensis
ENSTGUG00000002331	RIOK1	100	68.476	ENSANAG00000023777	RIOK1	100	67.365	Aotus_nancymaae
ENSTGUG00000002331	RIOK1	99	68.198	ENSACLG00000015799	riok1	100	67.838	Astatotilapia_calliptera
ENSTGUG00000002331	RIOK1	99	69.444	ENSAMXG00000015286	riok1	84	76.626	Astyanax_mexicanus
ENSTGUG00000002331	RIOK1	100	76.708	ENSBTAG00000013821	RIOK1	100	76.307	Bos_taurus
ENSTGUG00000002331	RIOK1	78	48.009	WBGene00019698	riok-1	77	51.345	Caenorhabditis_elegans
ENSTGUG00000002331	RIOK1	100	78.109	ENSCJAG00000042960	RIOK1	100	76.789	Callithrix_jacchus
ENSTGUG00000002331	RIOK1	100	79.159	ENSCAFG00000009563	RIOK1	100	79.123	Canis_familiaris
ENSTGUG00000002331	RIOK1	97	75.949	ENSCAFG00020013233	RIOK1	99	75.906	Canis_lupus_dingo
ENSTGUG00000002331	RIOK1	100	76.182	ENSCHIG00000001534	RIOK1	100	75.393	Capra_hircus
ENSTGUG00000002331	RIOK1	66	79.420	ENSTSYG00000011368	RIOK1	100	81.346	Carlito_syrichta
ENSTGUG00000002331	RIOK1	79	80.710	ENSCAPG00000008489	RIOK1	100	81.075	Cavia_aperea
ENSTGUG00000002331	RIOK1	98	75.404	ENSCPOG00000009882	RIOK1	100	76.007	Cavia_porcellus
ENSTGUG00000002331	RIOK1	100	77.487	ENSCCAG00000024061	RIOK1	100	76.789	Cebus_capucinus
ENSTGUG00000002331	RIOK1	100	76.789	ENSCATG00000001548	RIOK1	100	76.614	Cercocebus_atys
ENSTGUG00000002331	RIOK1	100	77.233	ENSCLAG00000003522	RIOK1	100	76.562	Chinchilla_lanigera
ENSTGUG00000002331	RIOK1	94	74.674	ENSCSAG00000007396	RIOK1	90	79.065	Chlorocebus_sabaeus
ENSTGUG00000002331	RIOK1	85	67.391	ENSCHOG00000001873	RIOK1	85	68.339	Choloepus_hoffmanni
ENSTGUG00000002331	RIOK1	94	80.000	ENSCPBG00000008685	RIOK1	91	80.187	Chrysemys_picta_bellii
ENSTGUG00000002331	RIOK1	100	76.614	ENSCANG00000032919	RIOK1	100	76.265	Colobus_angolensis_palliatus
ENSTGUG00000002331	RIOK1	99	73.239	ENSCGRG00001018868	Riok1	87	77.756	Cricetulus_griseus_chok1gshd
ENSTGUG00000002331	RIOK1	99	73.239	ENSCGRG00000008015	Riok1	87	77.756	Cricetulus_griseus_crigri
ENSTGUG00000002331	RIOK1	88	50.898	ENSCSEG00000015014	riok1	86	51.911	Cynoglossus_semilaevis
ENSTGUG00000002331	RIOK1	57	64.615	ENSCVAG00000011291	riok1	99	64.615	Cyprinodon_variegatus
ENSTGUG00000002331	RIOK1	99	69.027	ENSDARG00000016399	riok1	87	73.441	Danio_rerio
ENSTGUG00000002331	RIOK1	100	76.339	ENSDNOG00000015813	RIOK1	100	77.296	Dasypus_novemcinctus
ENSTGUG00000002331	RIOK1	100	75.910	ENSDORG00000008530	Riok1	100	77.193	Dipodomys_ordii
ENSTGUG00000002331	RIOK1	81	54.449	FBgn0036187	RIOK1	82	51.919	Drosophila_melanogaster
ENSTGUG00000002331	RIOK1	100	76.357	ENSETEG00000020273	RIOK1	100	76.098	Echinops_telfairi
ENSTGUG00000002331	RIOK1	99	62.324	ENSEBUG00000013672	riok1	99	62.435	Eptatretus_burgeri
ENSTGUG00000002331	RIOK1	94	75.888	ENSEASG00005012032	RIOK1	86	81.059	Equus_asinus_asinus
ENSTGUG00000002331	RIOK1	100	76.532	ENSECAG00000009007	RIOK1	100	77.273	Equus_caballus
ENSTGUG00000002331	RIOK1	77	68.100	ENSEEUG00000007123	RIOK1	100	68.100	Erinaceus_europaeus
ENSTGUG00000002331	RIOK1	99	66.021	ENSELUG00000017029	riok1	100	67.077	Esox_lucius
ENSTGUG00000002331	RIOK1	100	75.952	ENSFCAG00000027290	RIOK1	100	76.923	Felis_catus
ENSTGUG00000002331	RIOK1	100	97.359	ENSFALG00000013244	RIOK1	100	97.359	Ficedula_albicollis
ENSTGUG00000002331	RIOK1	100	76.357	ENSFDAG00000019139	RIOK1	100	74.870	Fukomys_damarensis
ENSTGUG00000002331	RIOK1	68	78.238	ENSFHEG00000021419	riok1	85	78.238	Fundulus_heteroclitus
ENSTGUG00000002331	RIOK1	73	72.155	ENSGMOG00000018668	riok1	94	73.020	Gadus_morhua
ENSTGUG00000002331	RIOK1	57	89.264	ENSGALG00000012795	RIOK1	100	90.661	Gallus_gallus
ENSTGUG00000002331	RIOK1	85	61.618	ENSGAFG00000004091	riok1	79	61.925	Gambusia_affinis
ENSTGUG00000002331	RIOK1	97	63.784	ENSGACG00000002496	riok1	94	72.008	Gasterosteus_aculeatus
ENSTGUG00000002331	RIOK1	82	81.935	ENSGAGG00000002262	RIOK1	98	82.151	Gopherus_agassizii
ENSTGUG00000002331	RIOK1	89	77.887	ENSGGOG00000011037	RIOK1	100	77.941	Gorilla_gorilla
ENSTGUG00000002331	RIOK1	100	75.880	ENSHGLG00000008699	RIOK1	100	75.000	Heterocephalus_glaber_female
ENSTGUG00000002331	RIOK1	100	76.056	ENSHGLG00100008188	RIOK1	100	75.175	Heterocephalus_glaber_male
ENSTGUG00000002331	RIOK1	88	69.478	ENSHCOG00000013275	riok1	90	70.061	Hippocampus_comes
ENSTGUG00000002331	RIOK1	99	70.629	ENSIPUG00000003290	riok1	86	76.923	Ictalurus_punctatus
ENSTGUG00000002331	RIOK1	100	77.856	ENSSTOG00000009289	RIOK1	100	77.856	Ictidomys_tridecemlineatus
ENSTGUG00000002331	RIOK1	100	76.224	ENSJJAG00000015152	Riok1	100	76.000	Jaculus_jaculus
ENSTGUG00000002331	RIOK1	68	76.607	ENSKMAG00000019378	riok1	99	76.607	Kryptolebias_marmoratus
ENSTGUG00000002331	RIOK1	88	71.944	ENSLBEG00000016650	riok1	86	72.561	Labrus_bergylta
ENSTGUG00000002331	RIOK1	100	66.025	ENSLACG00000000300	RIOK1	100	65.210	Latimeria_chalumnae
ENSTGUG00000002331	RIOK1	100	70.979	ENSLOCG00000011728	riok1	100	70.455	Lepisosteus_oculatus
ENSTGUG00000002331	RIOK1	100	77.758	ENSLAFG00000005504	RIOK1	100	77.058	Loxodonta_africana
ENSTGUG00000002331	RIOK1	100	76.265	ENSMFAG00000029990	RIOK1	100	76.091	Macaca_fascicularis
ENSTGUG00000002331	RIOK1	100	76.091	ENSMMUG00000015577	RIOK1	100	75.916	Macaca_mulatta
ENSTGUG00000002331	RIOK1	100	72.949	ENSMNEG00000034396	RIOK1	99	77.825	Macaca_nemestrina
ENSTGUG00000002331	RIOK1	100	76.789	ENSMLEG00000026327	RIOK1	100	76.614	Mandrillus_leucophaeus
ENSTGUG00000002331	RIOK1	98	67.257	ENSMAMG00000019557	riok1	88	73.116	Mastacembelus_armatus
ENSTGUG00000002331	RIOK1	99	68.198	ENSMZEG00005019482	riok1	100	67.838	Maylandia_zebra
ENSTGUG00000002331	RIOK1	100	86.491	ENSMGAG00000003816	RIOK1	100	86.140	Meleagris_gallopavo
ENSTGUG00000002331	RIOK1	99	74.513	ENSMAUG00000012751	Riok1	87	78.905	Mesocricetus_auratus
ENSTGUG00000002331	RIOK1	100	78.109	ENSMICG00000044301	RIOK1	84	77.123	Microcebus_murinus
ENSTGUG00000002331	RIOK1	99	73.097	ENSMOCG00000017032	Riok1	87	77.485	Microtus_ochrogaster
ENSTGUG00000002331	RIOK1	84	62.941	ENSMMOG00000020598	riok1	87	63.333	Mola_mola
ENSTGUG00000002331	RIOK1	100	76.491	ENSMODG00000009964	RIOK1	100	75.789	Monodelphis_domestica
ENSTGUG00000002331	RIOK1	88	63.800	ENSMALG00000019982	riok1	89	66.176	Monopterus_albus
ENSTGUG00000002331	RIOK1	99	73.050	MGP_CAROLIEiJ_G0018439	Riok1	87	77.890	Mus_caroli
ENSTGUG00000002331	RIOK1	99	71.479	ENSMUSG00000021428	Riok1	99	69.268	Mus_musculus
ENSTGUG00000002331	RIOK1	99	73.050	MGP_PahariEiJ_G0019507	Riok1	87	77.688	Mus_pahari
ENSTGUG00000002331	RIOK1	99	72.872	MGP_SPRETEiJ_G0019319	Riok1	87	77.355	Mus_spretus
ENSTGUG00000002331	RIOK1	100	77.193	ENSMPUG00000000570	RIOK1	100	75.556	Mustela_putorius_furo
ENSTGUG00000002331	RIOK1	100	77.058	ENSMLUG00000015312	RIOK1	100	76.883	Myotis_lucifugus
ENSTGUG00000002331	RIOK1	100	76.708	ENSNGAG00000021734	Riok1	100	75.395	Nannospalax_galili
ENSTGUG00000002331	RIOK1	74	76.651	ENSNBRG00000017489	riok1	79	78.019	Neolamprologus_brichardi
ENSTGUG00000002331	RIOK1	100	70.228	ENSNLEG00000011621	RIOK1	100	69.792	Nomascus_leucogenys
ENSTGUG00000002331	RIOK1	84	52.211	ENSMEUG00000006679	-	84	53.361	Notamacropus_eugenii
ENSTGUG00000002331	RIOK1	65	80.054	ENSOPRG00000009524	RIOK1	100	80.054	Ochotona_princeps
ENSTGUG00000002331	RIOK1	71	67.910	ENSODEG00000005663	RIOK1	100	65.375	Octodon_degus
ENSTGUG00000002331	RIOK1	98	67.908	ENSONIG00000014010	riok1	86	74.593	Oreochromis_niloticus
ENSTGUG00000002331	RIOK1	82	83.621	ENSOANG00000012553	RIOK1	100	83.621	Ornithorhynchus_anatinus
ENSTGUG00000002331	RIOK1	100	76.532	ENSOCUG00000011824	RIOK1	100	74.439	Oryctolagus_cuniculus
ENSTGUG00000002331	RIOK1	98	66.667	ENSORLG00000008221	riok1	88	71.951	Oryzias_latipes
ENSTGUG00000002331	RIOK1	98	64.748	ENSORLG00020013838	riok1	61	70.637	Oryzias_latipes_hni
ENSTGUG00000002331	RIOK1	98	66.667	ENSORLG00015009817	riok1	98	66.250	Oryzias_latipes_hsok
ENSTGUG00000002331	RIOK1	98	66.966	ENSOMEG00000002758	riok1	80	72.188	Oryzias_melastigma
ENSTGUG00000002331	RIOK1	100	70.877	ENSOGAG00000010192	RIOK1	100	69.863	Otolemur_garnettii
ENSTGUG00000002331	RIOK1	100	76.708	ENSOARG00000017747	RIOK1	100	75.916	Ovis_aries
ENSTGUG00000002331	RIOK1	100	68.631	ENSPPAG00000016349	RIOK1	100	77.676	Pan_paniscus
ENSTGUG00000002331	RIOK1	100	75.214	ENSPPRG00000001932	RIOK1	100	76.910	Panthera_pardus
ENSTGUG00000002331	RIOK1	100	75.556	ENSPTIG00000018545	RIOK1	100	77.257	Panthera_tigris_altaica
ENSTGUG00000002331	RIOK1	100	77.003	ENSPTRG00000017700	RIOK1	100	76.614	Pan_troglodytes
ENSTGUG00000002331	RIOK1	100	76.789	ENSPANG00000016522	RIOK1	100	76.614	Papio_anubis
ENSTGUG00000002331	RIOK1	99	69.805	ENSPKIG00000006442	riok1	88	75.051	Paramormyrops_kingsleyae
ENSTGUG00000002331	RIOK1	100	81.261	ENSPSIG00000006488	RIOK1	99	81.294	Pelodiscus_sinensis
ENSTGUG00000002331	RIOK1	73	69.734	ENSPMGG00000017807	riok1	96	68.333	Periophthalmus_magnuspinnatus
ENSTGUG00000002331	RIOK1	99	74.245	ENSPEMG00000017844	Riok1	87	79.108	Peromyscus_maniculatus_bairdii
ENSTGUG00000002331	RIOK1	71	69.682	ENSPMAG00000006351	riok1	80	77.612	Petromyzon_marinus
ENSTGUG00000002331	RIOK1	94	75.610	ENSPCIG00000012653	RIOK1	94	75.235	Phascolarctos_cinereus
ENSTGUG00000002331	RIOK1	99	64.121	ENSPFOG00000011532	riok1	89	70.816	Poecilia_formosa
ENSTGUG00000002331	RIOK1	99	64.021	ENSPLAG00000001341	riok1	89	70.816	Poecilia_latipinna
ENSTGUG00000002331	RIOK1	99	64.121	ENSPMEG00000007710	riok1	91	70.348	Poecilia_mexicana
ENSTGUG00000002331	RIOK1	99	63.845	ENSPREG00000009237	riok1	89	69.388	Poecilia_reticulata
ENSTGUG00000002331	RIOK1	100	78.284	ENSPPYG00000016207	RIOK1	100	77.856	Pongo_abelii
ENSTGUG00000002331	RIOK1	100	66.784	ENSPCAG00000007892	RIOK1	100	66.608	Procavia_capensis
ENSTGUG00000002331	RIOK1	100	76.440	ENSPVAG00000014091	RIOK1	100	76.708	Pteropus_vampyrus
ENSTGUG00000002331	RIOK1	57	71.472	ENSPNYG00000004465	riok1	100	71.166	Pundamilia_nyererei
ENSTGUG00000002331	RIOK1	100	69.459	ENSPNAG00000015435	riok1	100	70.506	Pygocentrus_nattereri
ENSTGUG00000002331	RIOK1	99	73.936	ENSRNOG00000014049	Riok1	100	79.149	Rattus_norvegicus
ENSTGUG00000002331	RIOK1	100	76.614	ENSRBIG00000036685	RIOK1	100	76.091	Rhinopithecus_bieti
ENSTGUG00000002331	RIOK1	100	76.789	ENSRROG00000036611	RIOK1	100	76.265	Rhinopithecus_roxellana
ENSTGUG00000002331	RIOK1	61	40.642	YOR119C	RIO1	98	36.489	Saccharomyces_cerevisiae
ENSTGUG00000002331	RIOK1	100	78.087	ENSSBOG00000012588	RIOK1	100	78.559	Saimiri_boliviensis_boliviensis
ENSTGUG00000002331	RIOK1	85	79.381	ENSSHAG00000003091	RIOK1	93	77.254	Sarcophilus_harrisii
ENSTGUG00000002331	RIOK1	86	75.610	ENSSFOG00015001035	riok1	88	75.862	Scleropages_formosus
ENSTGUG00000002331	RIOK1	57	65.951	ENSSDUG00000007291	riok1	100	65.951	Seriola_dumerili
ENSTGUG00000002331	RIOK1	98	66.966	ENSSLDG00000017657	riok1	88	72.098	Seriola_lalandi_dorsalis
ENSTGUG00000002331	RIOK1	86	72.597	ENSSPUG00000007624	RIOK1	83	72.449	Sphenodon_punctatus
ENSTGUG00000002331	RIOK1	99	67.914	ENSSPAG00000022710	riok1	100	67.558	Stegastes_partitus
ENSTGUG00000002331	RIOK1	100	75.263	ENSSSCG00000001024	RIOK1	100	75.439	Sus_scrofa
ENSTGUG00000002331	RIOK1	52	63.300	ENSTRUG00000001575	-	100	63.636	Takifugu_rubripes
ENSTGUG00000002331	RIOK1	76	62.500	ENSTRUG00000002854	riok1	95	65.039	Takifugu_rubripes
ENSTGUG00000002331	RIOK1	99	61.062	ENSTNIG00000003078	riok1	86	64.848	Tetraodon_nigroviridis
ENSTGUG00000002331	RIOK1	100	74.650	ENSTBEG00000016730	RIOK1	100	74.386	Tupaia_belangeri
ENSTGUG00000002331	RIOK1	74	86.889	ENSTTRG00000017335	RIOK1	81	86.889	Tursiops_truncatus
ENSTGUG00000002331	RIOK1	94	76.548	ENSUAMG00000003721	RIOK1	96	76.548	Ursus_americanus
ENSTGUG00000002331	RIOK1	100	77.680	ENSUMAG00000018461	RIOK1	100	77.680	Ursus_maritimus
ENSTGUG00000002331	RIOK1	60	85.356	ENSVPAG00000010813	-	63	85.000	Vicugna_pacos
ENSTGUG00000002331	RIOK1	100	78.809	ENSVVUG00000005018	RIOK1	100	78.772	Vulpes_vulpes
ENSTGUG00000002331	RIOK1	88	75.100	ENSXETG00000020436	riok1	86	75.975	Xenopus_tropicalis
ENSTGUG00000002331	RIOK1	84	66.105	ENSXCOG00000000245	riok1	100	67.227	Xiphophorus_couchianus
ENSTGUG00000002331	RIOK1	73	72.356	ENSXMAG00000014572	riok1	79	73.415	Xiphophorus_maculatus