EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000002367 (Gene tree)
Gene ID: 100219493
Gene Symbol: C1D
Alias: LRP1|Rrp47|SUN-CoR|SUNCOR
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 12656 bases
Position: chr3:3477351-3490006
Accession: 100219493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000002433	Sas10_Utp3	PF04000.15	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002457	C1D-201	860	XM_002199832	ENSTGUP00000002433	144 (aa)	XP_002199868	H0YVW1

Gene Model

Click here to download ENSTGUG00000002367's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000002367's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000002367	C1D	94	80.000	ENSG00000197223	C1D	93	81.203	Homo_sapiens
ENSTGUG00000002367	C1D	94	59.420	ENSAPOG00000005466	c1d	93	59.420	Acanthochromis_polyacanthus
ENSTGUG00000002367	C1D	92	80.451	ENSAMEG00000004859	C1D	90	80.451	Ailuropoda_melanoleuca
ENSTGUG00000002367	C1D	93	61.194	ENSACIG00000012684	c1d	87	61.194	Amphilophus_citrinellus
ENSTGUG00000002367	C1D	94	60.000	ENSAOCG00000020354	c1d	90	60.000	Amphiprion_ocellaris
ENSTGUG00000002367	C1D	92	61.654	ENSAPEG00000001403	c1d	85	61.654	Amphiprion_percula
ENSTGUG00000002367	C1D	93	64.964	ENSATEG00000012922	c1d	88	64.964	Anabas_testudineus
ENSTGUG00000002367	C1D	99	88.112	ENSAPLG00000009320	C1D	99	88.112	Anas_platyrhynchos
ENSTGUG00000002367	C1D	84	87.603	ENSACAG00000001337	C1D	99	87.603	Anolis_carolinensis
ENSTGUG00000002367	C1D	92	78.947	ENSANAG00000005773	-	93	78.947	Aotus_nancymaae
ENSTGUG00000002367	C1D	92	81.955	ENSANAG00000035972	-	93	81.955	Aotus_nancymaae
ENSTGUG00000002367	C1D	81	66.667	ENSACLG00000026206	c1d	80	65.833	Astatotilapia_calliptera
ENSTGUG00000002367	C1D	92	62.590	ENSAMXG00000043212	c1d	95	62.590	Astyanax_mexicanus
ENSTGUG00000002367	C1D	92	80.451	ENSBTAG00000049002	C1D	93	80.451	Bos_taurus
ENSTGUG00000002367	C1D	76	76.147	ENSCJAG00000044668	-	85	76.147	Callithrix_jacchus
ENSTGUG00000002367	C1D	94	80.741	ENSCJAG00000006589	C1D	88	80.741	Callithrix_jacchus
ENSTGUG00000002367	C1D	92	81.203	ENSCAFG00000030099	C1D	93	81.203	Canis_familiaris
ENSTGUG00000002367	C1D	92	81.203	ENSCAFG00020026997	C1D	93	81.203	Canis_lupus_dingo
ENSTGUG00000002367	C1D	92	79.699	ENSCHIG00000025729	C1D	93	79.699	Capra_hircus
ENSTGUG00000002367	C1D	92	80.451	ENSTSYG00000035739	-	93	80.451	Carlito_syrichta
ENSTGUG00000002367	C1D	100	67.361	ENSTSYG00000026573	-	85	67.361	Carlito_syrichta
ENSTGUG00000002367	C1D	77	71.171	ENSCAPG00000011523	-	93	71.171	Cavia_aperea
ENSTGUG00000002367	C1D	97	78.571	ENSCPOG00000037986	-	96	78.571	Cavia_porcellus
ENSTGUG00000002367	C1D	77	72.072	ENSCPOG00000020112	-	93	72.072	Cavia_porcellus
ENSTGUG00000002367	C1D	92	81.203	ENSCCAG00000030405	-	93	81.203	Cebus_capucinus
ENSTGUG00000002367	C1D	92	81.203	ENSCATG00000045336	C1D	93	81.203	Cercocebus_atys
ENSTGUG00000002367	C1D	92	78.195	ENSCATG00000043348	-	93	78.195	Cercocebus_atys
ENSTGUG00000002367	C1D	92	81.203	ENSCLAG00000011883	C1D	93	81.203	Chinchilla_lanigera
ENSTGUG00000002367	C1D	92	81.955	ENSCSAG00000014811	C1D	93	81.955	Chlorocebus_sabaeus
ENSTGUG00000002367	C1D	94	79.259	ENSCHOG00000006719	C1D	74	79.259	Choloepus_hoffmanni
ENSTGUG00000002367	C1D	100	81.944	ENSCPBG00000014451	C1D	97	81.944	Chrysemys_picta_bellii
ENSTGUG00000002367	C1D	81	45.690	ENSCING00000020906	-	64	44.262	Ciona_intestinalis
ENSTGUG00000002367	C1D	87	49.600	ENSCSAVG00000000150	-	69	49.600	Ciona_savignyi
ENSTGUG00000002367	C1D	98	78.723	ENSCANG00000035564	C1D	98	78.723	Colobus_angolensis_palliatus
ENSTGUG00000002367	C1D	81	73.276	ENSCANG00000036599	-	94	73.276	Colobus_angolensis_palliatus
ENSTGUG00000002367	C1D	94	77.206	ENSCGRG00001023376	C1d	95	77.206	Cricetulus_griseus_chok1gshd
ENSTGUG00000002367	C1D	94	77.206	ENSCGRG00000010245	C1d	95	77.206	Cricetulus_griseus_crigri
ENSTGUG00000002367	C1D	92	61.364	ENSCSEG00000000587	c1d	91	61.832	Cynoglossus_semilaevis
ENSTGUG00000002367	C1D	92	65.152	ENSCVAG00000004603	c1d	87	65.152	Cyprinodon_variegatus
ENSTGUG00000002367	C1D	84	69.421	ENSDARG00000021112	c1d	86	66.929	Danio_rerio
ENSTGUG00000002367	C1D	92	72.180	ENSDNOG00000046068	-	93	72.180	Dasypus_novemcinctus
ENSTGUG00000002367	C1D	92	81.203	ENSDORG00000003300	C1d	93	81.203	Dipodomys_ordii
ENSTGUG00000002367	C1D	65	81.915	ENSETEG00000014857	C1D	97	81.915	Echinops_telfairi
ENSTGUG00000002367	C1D	86	57.258	ENSEBUG00000006874	c1d	78	57.258	Eptatretus_burgeri
ENSTGUG00000002367	C1D	92	80.451	ENSEASG00005007307	C1D	85	80.451	Equus_asinus_asinus
ENSTGUG00000002367	C1D	93	79.851	ENSECAG00000002187	C1D	94	79.851	Equus_caballus
ENSTGUG00000002367	C1D	85	69.106	ENSELUG00000014823	c1d	84	69.106	Esox_lucius
ENSTGUG00000002367	C1D	92	80.451	ENSFCAG00000028933	C1D	93	80.451	Felis_catus
ENSTGUG00000002367	C1D	100	95.833	ENSFALG00000013640	C1D	87	95.833	Ficedula_albicollis
ENSTGUG00000002367	C1D	92	62.687	ENSFDAG00000014175	-	92	62.687	Fukomys_damarensis
ENSTGUG00000002367	C1D	92	79.699	ENSFDAG00000010462	-	93	79.699	Fukomys_damarensis
ENSTGUG00000002367	C1D	94	64.706	ENSFHEG00000010545	c1d	94	64.706	Fundulus_heteroclitus
ENSTGUG00000002367	C1D	81	64.103	ENSGMOG00000013911	-	93	64.103	Gadus_morhua
ENSTGUG00000002367	C1D	97	87.050	ENSGALG00000008765	C1D	96	87.050	Gallus_gallus
ENSTGUG00000002367	C1D	83	68.067	ENSGAFG00000012578	c1d	76	68.067	Gambusia_affinis
ENSTGUG00000002367	C1D	85	65.041	ENSGACG00000011981	c1d	96	65.041	Gasterosteus_aculeatus
ENSTGUG00000002367	C1D	90	85.271	ENSGAGG00000013383	C1D	97	80.556	Gopherus_agassizii
ENSTGUG00000002367	C1D	83	80.672	ENSGGOG00000025808	-	68	80.672	Gorilla_gorilla
ENSTGUG00000002367	C1D	91	80.916	ENSGGOG00000022296	-	91	80.916	Gorilla_gorilla
ENSTGUG00000002367	C1D	92	81.203	ENSGGOG00000025982	-	73	81.203	Gorilla_gorilla
ENSTGUG00000002367	C1D	81	68.103	ENSHBUG00000018531	c1d	71	67.227	Haplochromis_burtoni
ENSTGUG00000002367	C1D	82	87.288	ENSHGLG00000012332	-	94	80.741	Heterocephalus_glaber_female
ENSTGUG00000002367	C1D	98	67.376	ENSHGLG00000021219	-	98	67.376	Heterocephalus_glaber_female
ENSTGUG00000002367	C1D	98	68.085	ENSHGLG00100019951	-	98	68.085	Heterocephalus_glaber_male
ENSTGUG00000002367	C1D	94	80.741	ENSHGLG00100000221	-	94	80.741	Heterocephalus_glaber_male
ENSTGUG00000002367	C1D	82	67.797	ENSHCOG00000014589	c1d	80	67.797	Hippocampus_comes
ENSTGUG00000002367	C1D	82	67.797	ENSHCOG00000014568	C1D	80	67.797	Hippocampus_comes
ENSTGUG00000002367	C1D	84	63.636	ENSIPUG00000018661	c1d	84	63.636	Ictalurus_punctatus
ENSTGUG00000002367	C1D	98	78.014	ENSSTOG00000012346	C1D	98	78.014	Ictidomys_tridecemlineatus
ENSTGUG00000002367	C1D	81	78.632	ENSJJAG00000009540	-	85	78.632	Jaculus_jaculus
ENSTGUG00000002367	C1D	81	66.379	ENSJJAG00000016086	-	82	66.379	Jaculus_jaculus
ENSTGUG00000002367	C1D	81	71.901	ENSJJAG00000023186	-	92	71.901	Jaculus_jaculus
ENSTGUG00000002367	C1D	81	76.068	ENSJJAG00000005044	-	85	76.068	Jaculus_jaculus
ENSTGUG00000002367	C1D	94	62.774	ENSKMAG00000015077	c1d	87	63.433	Kryptolebias_marmoratus
ENSTGUG00000002367	C1D	94	63.971	ENSLBEG00000008351	c1d	87	63.971	Labrus_bergylta
ENSTGUG00000002367	C1D	100	74.306	ENSLACG00000007516	C1D	95	74.306	Latimeria_chalumnae
ENSTGUG00000002367	C1D	99	69.930	ENSLOCG00000016024	c1d	95	69.930	Lepisosteus_oculatus
ENSTGUG00000002367	C1D	92	81.203	ENSLAFG00000002083	C1D	93	81.203	Loxodonta_africana
ENSTGUG00000002367	C1D	92	79.699	ENSMFAG00000028681	-	93	79.699	Macaca_fascicularis
ENSTGUG00000002367	C1D	92	81.203	ENSMFAG00000034261	C1D	93	81.203	Macaca_fascicularis
ENSTGUG00000002367	C1D	92	77.444	ENSMFAG00000034034	-	93	77.444	Macaca_fascicularis
ENSTGUG00000002367	C1D	92	78.947	ENSMMUG00000017209	-	93	78.947	Macaca_mulatta
ENSTGUG00000002367	C1D	92	76.692	ENSMMUG00000043184	-	93	76.692	Macaca_mulatta
ENSTGUG00000002367	C1D	92	81.203	ENSMMUG00000041557	C1D	94	81.203	Macaca_mulatta
ENSTGUG00000002367	C1D	92	81.203	ENSMNEG00000040612	C1D	93	81.203	Macaca_nemestrina
ENSTGUG00000002367	C1D	92	77.444	ENSMNEG00000020626	-	93	77.444	Macaca_nemestrina
ENSTGUG00000002367	C1D	92	81.203	ENSMLEG00000027619	C1D	93	81.203	Mandrillus_leucophaeus
ENSTGUG00000002367	C1D	92	78.195	ENSMLEG00000028412	-	93	78.195	Mandrillus_leucophaeus
ENSTGUG00000002367	C1D	85	66.667	ENSMAMG00000022156	c1d	84	64.122	Mastacembelus_armatus
ENSTGUG00000002367	C1D	81	68.103	ENSMZEG00005027343	c1d	82	67.227	Maylandia_zebra
ENSTGUG00000002367	C1D	98	84.397	ENSMGAG00000004517	C1D	97	84.397	Meleagris_gallopavo
ENSTGUG00000002367	C1D	94	77.206	ENSMAUG00000008974	C1d	95	77.206	Mesocricetus_auratus
ENSTGUG00000002367	C1D	92	79.699	ENSMICG00000032141	C1D	93	79.699	Microcebus_murinus
ENSTGUG00000002367	C1D	94	77.206	ENSMOCG00000010860	C1d	95	77.206	Microtus_ochrogaster
ENSTGUG00000002367	C1D	98	61.702	ENSMMOG00000007332	c1d	90	61.702	Mola_mola
ENSTGUG00000002367	C1D	100	79.167	ENSMODG00000003561	C1D	100	79.167	Monodelphis_domestica
ENSTGUG00000002367	C1D	85	65.574	ENSMALG00000020864	c1d	94	64.228	Monopterus_albus
ENSTGUG00000002367	C1D	94	78.676	MGP_CAROLIEiJ_G0016110	C1d	94	84.685	Mus_caroli
ENSTGUG00000002367	C1D	94	78.676	ENSMUSG00000000581	C1d	94	84.685	Mus_musculus
ENSTGUG00000002367	C1D	94	79.412	MGP_PahariEiJ_G0016781	C1d	94	85.586	Mus_pahari
ENSTGUG00000002367	C1D	94	78.676	MGP_SPRETEiJ_G0016952	C1d	94	84.685	Mus_spretus
ENSTGUG00000002367	C1D	92	80.451	ENSMPUG00000006224	C1D	93	80.451	Mustela_putorius_furo
ENSTGUG00000002367	C1D	100	75.000	ENSMLUG00000024947	-	100	75.000	Myotis_lucifugus
ENSTGUG00000002367	C1D	100	77.778	ENSMLUG00000029990	-	100	77.778	Myotis_lucifugus
ENSTGUG00000002367	C1D	100	77.083	ENSMLUG00000010791	-	100	77.083	Myotis_lucifugus
ENSTGUG00000002367	C1D	92	76.692	ENSNGAG00000011872	-	94	76.692	Nannospalax_galili
ENSTGUG00000002367	C1D	87	72.800	ENSNGAG00000012482	-	98	72.800	Nannospalax_galili
ENSTGUG00000002367	C1D	92	72.932	ENSNGAG00000016675	-	93	72.932	Nannospalax_galili
ENSTGUG00000002367	C1D	81	68.966	ENSNBRG00000010704	c1d	82	68.067	Neolamprologus_brichardi
ENSTGUG00000002367	C1D	92	80.451	ENSNLEG00000032919	-	73	80.451	Nomascus_leucogenys
ENSTGUG00000002367	C1D	92	81.955	ENSOPRG00000009586	C1D	93	81.955	Ochotona_princeps
ENSTGUG00000002367	C1D	94	80.000	ENSODEG00000011242	-	94	80.000	Octodon_degus
ENSTGUG00000002367	C1D	93	80.597	ENSODEG00000018885	-	95	80.597	Octodon_degus
ENSTGUG00000002367	C1D	98	68.794	ENSODEG00000018525	-	98	68.794	Octodon_degus
ENSTGUG00000002367	C1D	81	68.966	ENSONIG00000001233	c1d	86	64.394	Oreochromis_niloticus
ENSTGUG00000002367	C1D	77	85.586	ENSOANG00000008385	C1D	100	85.586	Ornithorhynchus_anatinus
ENSTGUG00000002367	C1D	94	79.412	ENSOCUG00000025587	-	95	79.412	Oryctolagus_cuniculus
ENSTGUG00000002367	C1D	94	79.412	ENSOCUG00000009771	-	95	79.412	Oryctolagus_cuniculus
ENSTGUG00000002367	C1D	83	68.908	ENSORLG00000021968	c1d	76	68.908	Oryzias_latipes
ENSTGUG00000002367	C1D	83	68.908	ENSORLG00020000507	c1d	77	68.908	Oryzias_latipes_hni
ENSTGUG00000002367	C1D	91	64.885	ENSORLG00015004594	c1d	83	64.885	Oryzias_latipes_hsok
ENSTGUG00000002367	C1D	93	64.179	ENSOMEG00000004672	c1d	86	64.179	Oryzias_melastigma
ENSTGUG00000002367	C1D	92	78.195	ENSOGAG00000027934	-	93	78.195	Otolemur_garnettii
ENSTGUG00000002367	C1D	92	79.699	ENSOARG00000019931	C1D	92	79.699	Ovis_aries
ENSTGUG00000002367	C1D	94	74.265	ENSPPAG00000040091	-	77	74.265	Pan_paniscus
ENSTGUG00000002367	C1D	92	81.203	ENSPPAG00000037847	-	93	81.203	Pan_paniscus
ENSTGUG00000002367	C1D	92	80.451	ENSPPRG00000017045	-	93	80.451	Panthera_pardus
ENSTGUG00000002367	C1D	60	66.667	ENSPPRG00000022830	-	75	66.667	Panthera_pardus
ENSTGUG00000002367	C1D	92	80.451	ENSPTIG00000009414	C1D	93	80.451	Panthera_tigris_altaica
ENSTGUG00000002367	C1D	92	81.203	ENSPTRG00000023558	C1D	93	81.203	Pan_troglodytes
ENSTGUG00000002367	C1D	92	77.444	ENSPANG00000000501	-	93	77.444	Papio_anubis
ENSTGUG00000002367	C1D	94	80.000	ENSPANG00000002886	C1D	74	80.000	Papio_anubis
ENSTGUG00000002367	C1D	100	62.500	ENSPKIG00000004877	c1d	97	62.500	Paramormyrops_kingsleyae
ENSTGUG00000002367	C1D	99	83.916	ENSPSIG00000010015	C1D	99	83.916	Pelodiscus_sinensis
ENSTGUG00000002367	C1D	88	67.460	ENSPMGG00000009326	c1d	89	63.830	Periophthalmus_magnuspinnatus
ENSTGUG00000002367	C1D	99	73.427	ENSPCIG00000006831	-	97	73.427	Phascolarctos_cinereus
ENSTGUG00000002367	C1D	100	78.472	ENSPCIG00000018629	-	100	78.472	Phascolarctos_cinereus
ENSTGUG00000002367	C1D	83	69.748	ENSPFOG00000003686	c1d	77	69.748	Poecilia_formosa
ENSTGUG00000002367	C1D	83	69.748	ENSPLAG00000000228	c1d	84	69.748	Poecilia_latipinna
ENSTGUG00000002367	C1D	83	69.748	ENSPMEG00000023213	c1d	77	69.748	Poecilia_mexicana
ENSTGUG00000002367	C1D	83	70.588	ENSPREG00000000742	c1d	84	70.588	Poecilia_reticulata
ENSTGUG00000002367	C1D	92	81.203	ENSPPYG00000012354	C1D	72	81.203	Pongo_abelii
ENSTGUG00000002367	C1D	92	76.692	ENSPPYG00000002294	-	93	76.692	Pongo_abelii
ENSTGUG00000002367	C1D	92	69.173	ENSPCAG00000010088	C1D	73	69.173	Procavia_capensis
ENSTGUG00000002367	C1D	92	79.699	ENSPCOG00000016112	C1D	93	79.699	Propithecus_coquereli
ENSTGUG00000002367	C1D	92	81.203	ENSPVAG00000012692	C1D	73	81.203	Pteropus_vampyrus
ENSTGUG00000002367	C1D	84	67.480	ENSPNYG00000008789	c1d	83	66.667	Pundamilia_nyererei
ENSTGUG00000002367	C1D	98	63.121	ENSPNAG00000004219	c1d	97	63.121	Pygocentrus_nattereri
ENSTGUG00000002367	C1D	94	79.412	ENSRNOG00000005982	C1d	95	79.412	Rattus_norvegicus
ENSTGUG00000002367	C1D	82	83.051	ENSRBIG00000026211	-	84	83.051	Rhinopithecus_bieti
ENSTGUG00000002367	C1D	92	77.444	ENSRROG00000005944	-	93	77.444	Rhinopithecus_roxellana
ENSTGUG00000002367	C1D	92	81.203	ENSRROG00000029013	C1D	93	81.203	Rhinopithecus_roxellana
ENSTGUG00000002367	C1D	92	81.203	ENSSBOG00000025275	C1D	93	81.203	Saimiri_boliviensis_boliviensis
ENSTGUG00000002367	C1D	100	77.083	ENSSHAG00000008352	C1D	68	77.083	Sarcophilus_harrisii
ENSTGUG00000002367	C1D	90	65.385	ENSSFOG00015010861	c1d	92	65.385	Scleropages_formosus
ENSTGUG00000002367	C1D	94	62.222	ENSSMAG00000019230	c1d	86	62.222	Scophthalmus_maximus
ENSTGUG00000002367	C1D	94	64.444	ENSSDUG00000020213	c1d	86	64.444	Seriola_dumerili
ENSTGUG00000002367	C1D	94	64.444	ENSSLDG00000017371	c1d	86	64.444	Seriola_lalandi_dorsalis
ENSTGUG00000002367	C1D	90	82.946	ENSSPUG00000006525	C1D	99	79.167	Sphenodon_punctatus
ENSTGUG00000002367	C1D	83	69.748	ENSSPAG00000008574	c1d	86	65.185	Stegastes_partitus
ENSTGUG00000002367	C1D	78	68.750	ENSSSCG00000035701	-	93	68.750	Sus_scrofa
ENSTGUG00000002367	C1D	92	79.699	ENSSSCG00000039331	-	93	79.699	Sus_scrofa
ENSTGUG00000002367	C1D	94	62.222	ENSTRUG00000012245	c1d	81	62.222	Takifugu_rubripes
ENSTGUG00000002367	C1D	94	62.222	ENSTNIG00000009827	c1d	91	62.222	Tetraodon_nigroviridis
ENSTGUG00000002367	C1D	92	79.699	ENSTBEG00000009797	C1D	93	79.699	Tupaia_belangeri
ENSTGUG00000002367	C1D	94	78.519	ENSTTRG00000013982	C1D	76	78.519	Tursiops_truncatus
ENSTGUG00000002367	C1D	83	72.358	ENSUAMG00000025246	C1D	91	72.358	Ursus_americanus
ENSTGUG00000002367	C1D	65	64.948	ENSUMAG00000006451	-	85	65.421	Ursus_maritimus
ENSTGUG00000002367	C1D	92	80.451	ENSUMAG00000021118	-	93	80.451	Ursus_maritimus
ENSTGUG00000002367	C1D	92	81.203	ENSVPAG00000012080	C1D	74	81.203	Vicugna_pacos
ENSTGUG00000002367	C1D	92	81.203	ENSVVUG00000027629	C1D	82	81.203	Vulpes_vulpes
ENSTGUG00000002367	C1D	100	71.528	ENSXETG00000025934	c1d	99	71.528	Xenopus_tropicalis
ENSTGUG00000002367	C1D	83	68.908	ENSXCOG00000013813	c1d	84	65.649	Xiphophorus_couchianus
ENSTGUG00000002367	C1D	83	68.067	ENSXMAG00000022273	c1d	77	68.067	Xiphophorus_maculatus