EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000002408 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 24783 bases
Position: chr4:9800685-9825467
Accession: 100223859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000002494	ResIII	PF04851.15	6.9e-12	1	1
ENSTGUP00000002494	DEAD	PF00270.29	7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002518	SMARCA5-201	3027	XM_012573307	ENSTGUP00000002494	1008 (aa)	XP_012428761	H0YW21

Gene Model

Click here to download ENSTGUG00000002408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000002408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000002408	SMARCA5	54	44.444	ENSTGUG00000007157	HELLS	70	44.444
ENSTGUG00000002408	SMARCA5	97	87.971	ENSTGUG00000003899	-	99	87.971
ENSTGUG00000002408	SMARCA5	53	40.555	ENSTGUG00000015488	-	67	40.555
ENSTGUG00000002408	SMARCA5	56	40.941	ENSTGUG00000013392	-	64	41.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000002408	SMARCA5	99	95.929	ENSG00000153147	SMARCA5	96	95.929	Homo_sapiens
ENSTGUG00000002408	SMARCA5	100	96.230	ENSAMEG00000009585	SMARCA5	96	96.230	Ailuropoda_melanoleuca
ENSTGUG00000002408	SMARCA5	95	97.433	ENSAPLG00000009206	SMARCA5	100	97.433	Anas_platyrhynchos
ENSTGUG00000002408	SMARCA5	98	96.875	ENSACAG00000003038	SMARCA5	97	95.734	Anolis_carolinensis
ENSTGUG00000002408	SMARCA5	99	96.393	ENSANAG00000019345	SMARCA5	100	96.393	Aotus_nancymaae
ENSTGUG00000002408	SMARCA5	100	95.933	ENSBTAG00000003399	SMARCA5	96	95.933	Bos_taurus
ENSTGUG00000002408	SMARCA5	99	96.127	ENSCJAG00000002735	SMARCA5	96	96.127	Callithrix_jacchus
ENSTGUG00000002408	SMARCA5	100	96.329	ENSCAFG00000007525	SMARCA5	96	96.329	Canis_familiaris
ENSTGUG00000002408	SMARCA5	98	96.356	ENSCAFG00020025641	SMARCA5	95	96.356	Canis_lupus_dingo
ENSTGUG00000002408	SMARCA5	100	94.345	ENSCHIG00000016375	-	97	94.345	Capra_hircus
ENSTGUG00000002408	SMARCA5	100	96.032	ENSCHIG00000013730	-	96	96.032	Capra_hircus
ENSTGUG00000002408	SMARCA5	99	96.982	ENSTSYG00000009954	SMARCA5	99	96.982	Carlito_syrichta
ENSTGUG00000002408	SMARCA5	96	96.698	ENSCAPG00000013747	SMARCA5	95	96.698	Cavia_aperea
ENSTGUG00000002408	SMARCA5	100	95.833	ENSCPOG00000002259	SMARCA5	96	95.833	Cavia_porcellus
ENSTGUG00000002408	SMARCA5	99	96.493	ENSCCAG00000027215	SMARCA5	100	96.493	Cebus_capucinus
ENSTGUG00000002408	SMARCA5	99	95.929	ENSCATG00000044917	SMARCA5	96	95.929	Cercocebus_atys
ENSTGUG00000002408	SMARCA5	99	96.579	ENSCLAG00000006153	SMARCA5	100	96.579	Chinchilla_lanigera
ENSTGUG00000002408	SMARCA5	96	97.113	ENSCSAG00000003448	SMARCA5	100	97.113	Chlorocebus_sabaeus
ENSTGUG00000002408	SMARCA5	91	96.132	ENSCHOG00000011724	SMARCA5	87	96.132	Choloepus_hoffmanni
ENSTGUG00000002408	SMARCA5	99	97.027	ENSCPBG00000027535	SMARCA5	97	97.027	Chrysemys_picta_bellii
ENSTGUG00000002408	SMARCA5	99	95.829	ENSCANG00000041629	SMARCA5	96	95.829	Colobus_angolensis_palliatus
ENSTGUG00000002408	SMARCA5	99	96.127	ENSCGRG00001012719	Smarca5	95	96.127	Cricetulus_griseus_chok1gshd
ENSTGUG00000002408	SMARCA5	99	96.781	ENSCGRG00000001417	Smarca5	99	96.781	Cricetulus_griseus_crigri
ENSTGUG00000002408	SMARCA5	99	93.545	ENSDNOG00000009158	SMARCA5	96	93.545	Dasypus_novemcinctus
ENSTGUG00000002408	SMARCA5	94	89.252	ENSDORG00000003466	Smarca5	97	89.252	Dipodomys_ordii
ENSTGUG00000002408	SMARCA5	99	83.217	ENSEBUG00000014773	SMARCA5	99	83.217	Eptatretus_burgeri
ENSTGUG00000002408	SMARCA5	99	96.421	ENSEASG00005001866	SMARCA5	98	97.579	Equus_asinus_asinus
ENSTGUG00000002408	SMARCA5	99	96.421	ENSECAG00000002676	SMARCA5	96	96.421	Equus_caballus
ENSTGUG00000002408	SMARCA5	99	92.455	ENSEEUG00000013176	SMARCA5	100	92.455	Erinaceus_europaeus
ENSTGUG00000002408	SMARCA5	96	89.691	ENSELUG00000014653	SMARCA5	99	89.691	Esox_lucius
ENSTGUG00000002408	SMARCA5	100	96.230	ENSFCAG00000004544	SMARCA5	96	96.230	Felis_catus
ENSTGUG00000002408	SMARCA5	96	99.897	ENSFALG00000004987	SMARCA5	100	99.897	Ficedula_albicollis
ENSTGUG00000002408	SMARCA5	99	96.781	ENSFDAG00000021016	SMARCA5	100	96.781	Fukomys_damarensis
ENSTGUG00000002408	SMARCA5	99	87.264	ENSGMOG00000007519	SMARCA5	97	87.264	Gadus_morhua
ENSTGUG00000002408	SMARCA5	99	97.716	ENSGALG00000009913	SMARCA5	97	97.716	Gallus_gallus
ENSTGUG00000002408	SMARCA5	97	90.379	ENSGACG00000017238	SMARCA5	95	90.379	Gasterosteus_aculeatus
ENSTGUG00000002408	SMARCA5	99	97.405	ENSGAGG00000019882	SMARCA5	96	97.405	Gopherus_agassizii
ENSTGUG00000002408	SMARCA5	99	96.680	ENSGGOG00000012595	SMARCA5	99	96.680	Gorilla_gorilla
ENSTGUG00000002408	SMARCA5	99	86.680	ENSHGLG00000000317	-	96	86.680	Heterocephalus_glaber_female
ENSTGUG00000002408	SMARCA5	100	95.933	ENSHGLG00000000816	-	96	95.933	Heterocephalus_glaber_female
ENSTGUG00000002408	SMARCA5	99	96.680	ENSHGLG00100018421	-	100	96.680	Heterocephalus_glaber_male
ENSTGUG00000002408	SMARCA5	100	96.329	ENSSTOG00000010683	SMARCA5	96	96.329	Ictidomys_tridecemlineatus
ENSTGUG00000002408	SMARCA5	99	95.916	ENSJJAG00000014965	Smarca5	96	95.833	Jaculus_jaculus
ENSTGUG00000002408	SMARCA5	98	96.041	ENSLACG00000007091	SMARCA5	97	96.041	Latimeria_chalumnae
ENSTGUG00000002408	SMARCA5	98	92.222	ENSLOCG00000008966	SMARCA5	96	92.222	Lepisosteus_oculatus
ENSTGUG00000002408	SMARCA5	99	96.226	ENSLAFG00000007795	SMARCA5	96	96.226	Loxodonta_africana
ENSTGUG00000002408	SMARCA5	99	95.929	ENSMFAG00000043649	SMARCA5	96	95.929	Macaca_fascicularis
ENSTGUG00000002408	SMARCA5	99	95.929	ENSMMUG00000000829	SMARCA5	97	97.155	Macaca_mulatta
ENSTGUG00000002408	SMARCA5	99	95.929	ENSMNEG00000031916	SMARCA5	96	95.929	Macaca_nemestrina
ENSTGUG00000002408	SMARCA5	99	95.929	ENSMLEG00000042393	SMARCA5	96	95.929	Mandrillus_leucophaeus
ENSTGUG00000002408	SMARCA5	99	97.898	ENSMGAG00000003517	SMARCA5	99	97.898	Meleagris_gallopavo
ENSTGUG00000002408	SMARCA5	99	96.781	ENSMAUG00000015902	Smarca5	98	96.781	Mesocricetus_auratus
ENSTGUG00000002408	SMARCA5	100	96.032	ENSMICG00000003971	SMARCA5	99	95.400	Microcebus_murinus
ENSTGUG00000002408	SMARCA5	99	96.028	ENSMOCG00000016986	-	96	96.028	Microtus_ochrogaster
ENSTGUG00000002408	SMARCA5	100	96.429	ENSMODG00000000391	SMARCA5	96	96.429	Monodelphis_domestica
ENSTGUG00000002408	SMARCA5	99	96.300	ENSMUSG00000031715	Smarca5	96	96.032	Mus_musculus
ENSTGUG00000002408	SMARCA5	99	96.500	MGP_PahariEiJ_G0022862	Smarca5	96	96.230	Mus_pahari
ENSTGUG00000002408	SMARCA5	100	96.329	ENSMLUG00000000468	SMARCA5	96	96.329	Myotis_lucifugus
ENSTGUG00000002408	SMARCA5	99	96.226	ENSNGAG00000000441	Smarca5	96	96.226	Nannospalax_galili
ENSTGUG00000002408	SMARCA5	99	95.929	ENSNLEG00000005383	SMARCA5	96	95.929	Nomascus_leucogenys
ENSTGUG00000002408	SMARCA5	96	89.783	ENSMEUG00000001267	SMARCA5	100	89.783	Notamacropus_eugenii
ENSTGUG00000002408	SMARCA5	89	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSTGUG00000002408	SMARCA5	96	97.629	ENSOANG00000013921	SMARCA5	100	97.629	Ornithorhynchus_anatinus
ENSTGUG00000002408	SMARCA5	96	97.320	ENSOCUG00000013042	SMARCA5	100	97.320	Oryctolagus_cuniculus
ENSTGUG00000002408	SMARCA5	100	96.131	ENSOGAG00000009702	SMARCA5	96	96.131	Otolemur_garnettii
ENSTGUG00000002408	SMARCA5	99	95.829	ENSOARG00000010589	SMARCA5	95	95.829	Ovis_aries
ENSTGUG00000002408	SMARCA5	99	96.781	ENSPPAG00000028523	SMARCA5	99	96.781	Pan_paniscus
ENSTGUG00000002408	SMARCA5	99	91.291	ENSPPRG00000004925	SMARCA5	96	91.667	Panthera_pardus
ENSTGUG00000002408	SMARCA5	100	96.230	ENSPTIG00000020959	SMARCA5	97	96.230	Panthera_tigris_altaica
ENSTGUG00000002408	SMARCA5	99	96.680	ENSPTRG00000016472	SMARCA5	99	96.680	Pan_troglodytes
ENSTGUG00000002408	SMARCA5	99	95.929	ENSPANG00000001175	SMARCA5	96	95.929	Papio_anubis
ENSTGUG00000002408	SMARCA5	97	91.393	ENSPKIG00000015885	SMARCA5	100	91.546	Paramormyrops_kingsleyae
ENSTGUG00000002408	SMARCA5	97	90.835	ENSPKIG00000015699	SMARCA5	98	89.953	Paramormyrops_kingsleyae
ENSTGUG00000002408	SMARCA5	99	95.687	ENSPSIG00000004177	SMARCA5	100	95.687	Pelodiscus_sinensis
ENSTGUG00000002408	SMARCA5	96	90.844	ENSPMGG00000012316	SMARCA5	100	90.844	Periophthalmus_magnuspinnatus
ENSTGUG00000002408	SMARCA5	99	95.631	ENSPEMG00000008060	Smarca5	99	95.631	Peromyscus_maniculatus_bairdii
ENSTGUG00000002408	SMARCA5	63	86.427	ENSPMAG00000008026	SMARCA5	99	86.427	Petromyzon_marinus
ENSTGUG00000002408	SMARCA5	97	70.445	ENSPMAG00000006011	SMARCA5	80	85.737	Petromyzon_marinus
ENSTGUG00000002408	SMARCA5	99	96.425	ENSPCIG00000003926	SMARCA5	96	96.425	Phascolarctos_cinereus
ENSTGUG00000002408	SMARCA5	99	96.028	ENSPPYG00000015091	SMARCA5	96	96.028	Pongo_abelii
ENSTGUG00000002408	SMARCA5	86	88.590	ENSPCAG00000014230	SMARCA5	87	88.088	Procavia_capensis
ENSTGUG00000002408	SMARCA5	100	93.155	ENSPCOG00000026744	SMARCA5	99	93.461	Propithecus_coquereli
ENSTGUG00000002408	SMARCA5	99	96.697	ENSPVAG00000006482	SMARCA5	96	96.226	Pteropus_vampyrus
ENSTGUG00000002408	SMARCA5	99	90.462	ENSPNAG00000027824	SMARCA5	97	91.441	Pygocentrus_nattereri
ENSTGUG00000002408	SMARCA5	99	96.687	ENSRNOG00000018149	Smarca5	100	96.687	Rattus_norvegicus
ENSTGUG00000002408	SMARCA5	99	95.734	ENSRBIG00000044644	SMARCA5	96	95.734	Rhinopithecus_bieti
ENSTGUG00000002408	SMARCA5	99	96.583	ENSRROG00000029591	SMARCA5	99	96.583	Rhinopithecus_roxellana
ENSTGUG00000002408	SMARCA5	99	96.226	ENSSBOG00000036257	SMARCA5	96	96.226	Saimiri_boliviensis_boliviensis
ENSTGUG00000002408	SMARCA5	98	97.379	ENSSHAG00000008464	SMARCA5	99	97.379	Sarcophilus_harrisii
ENSTGUG00000002408	SMARCA5	97	91.906	ENSSFOG00015013252	SMARCA5	95	91.906	Scleropages_formosus
ENSTGUG00000002408	SMARCA5	100	94.841	ENSSPUG00000007604	SMARCA5	100	95.683	Sphenodon_punctatus
ENSTGUG00000002408	SMARCA5	100	96.329	ENSSSCG00000009047	SMARCA5	96	96.329	Sus_scrofa
ENSTGUG00000002408	SMARCA5	97	96.834	ENSUAMG00000023495	SMARCA5	94	96.450	Ursus_americanus
ENSTGUG00000002408	SMARCA5	99	96.700	ENSUMAG00000015324	SMARCA5	97	96.700	Ursus_maritimus
ENSTGUG00000002408	SMARCA5	100	96.230	ENSVPAG00000008982	SMARCA5	96	96.230	Vicugna_pacos
ENSTGUG00000002408	SMARCA5	100	96.230	ENSVVUG00000017473	SMARCA5	96	96.230	Vulpes_vulpes
ENSTGUG00000002408	SMARCA5	94	92.902	ENSXETG00000017566	smarca5	96	92.902	Xenopus_tropicalis