EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000002480 (Gene tree)
Gene ID: 100229654
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 42888 bases
Position: chrZ:47295168-47338055
Accession: 100229654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000002593	rRNA_proc-arch	PF13234.6	1.5e-87	1	1
ENSTGUP00000002593	DEAD	PF00270.29	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000002621	MTREX-201	3277	XM_002186723	ENSTGUP00000002593	1035 (aa)	XP_002186759	H0YWC0

Gene Model

Click here to download ENSTGUG00000002480's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000002480's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000002480	MTREX	100	89.933	ENSG00000039123	MTREX	100	89.933	Homo_sapiens
ENSTGUG00000002480	MTREX	100	82.613	ENSAPOG00000007814	mtrex	100	82.613	Acanthochromis_polyacanthus
ENSTGUG00000002480	MTREX	100	89.847	ENSAMEG00000013856	MTREX	100	89.847	Ailuropoda_melanoleuca
ENSTGUG00000002480	MTREX	100	81.521	ENSACIG00000015117	mtrex	100	81.521	Amphilophus_citrinellus
ENSTGUG00000002480	MTREX	100	82.630	ENSAOCG00000011884	mtrex	100	82.630	Amphiprion_ocellaris
ENSTGUG00000002480	MTREX	100	82.534	ENSAPEG00000019384	mtrex	100	82.534	Amphiprion_percula
ENSTGUG00000002480	MTREX	100	82.788	ENSATEG00000015117	mtrex	100	82.788	Anabas_testudineus
ENSTGUG00000002480	MTREX	94	93.750	ENSAPLG00000009694	MTREX	98	93.750	Anas_platyrhynchos
ENSTGUG00000002480	MTREX	100	90.279	ENSACAG00000015200	MTREX	96	90.279	Anolis_carolinensis
ENSTGUG00000002480	MTREX	100	89.443	ENSANAG00000023095	MTREX	100	89.741	Aotus_nancymaae
ENSTGUG00000002480	MTREX	100	82.037	ENSACLG00000001921	mtrex	100	82.133	Astatotilapia_calliptera
ENSTGUG00000002480	MTREX	95	82.929	ENSAMXG00000018751	mtrex	99	82.929	Astyanax_mexicanus
ENSTGUG00000002480	MTREX	100	89.423	ENSBTAG00000010518	MTREX	100	89.625	Bos_taurus
ENSTGUG00000002480	MTREX	91	53.935	WBGene00012342	mtr-4	92	53.935	Caenorhabditis_elegans
ENSTGUG00000002480	MTREX	100	88.836	ENSCJAG00000001773	MTREX	100	89.037	Callithrix_jacchus
ENSTGUG00000002480	MTREX	100	90.125	ENSCAFG00000006818	MTREX	100	90.125	Canis_familiaris
ENSTGUG00000002480	MTREX	100	90.125	ENSCAFG00020024352	MTREX	100	90.125	Canis_lupus_dingo
ENSTGUG00000002480	MTREX	100	89.251	ENSCHIG00000024413	MTREX	100	89.453	Capra_hircus
ENSTGUG00000002480	MTREX	93	91.562	ENSTSYG00000007389	MTREX	100	91.562	Carlito_syrichta
ENSTGUG00000002480	MTREX	96	68.012	ENSCAPG00000008696	MTREX	99	68.012	Cavia_aperea
ENSTGUG00000002480	MTREX	100	89.347	ENSCPOG00000009797	MTREX	100	89.539	Cavia_porcellus
ENSTGUG00000002480	MTREX	100	89.443	ENSCCAG00000014177	MTREX	100	89.741	Cebus_capucinus
ENSTGUG00000002480	MTREX	100	89.837	ENSCATG00000042153	MTREX	100	89.837	Cercocebus_atys
ENSTGUG00000002480	MTREX	100	89.741	ENSCLAG00000006622	MTREX	100	89.741	Chinchilla_lanigera
ENSTGUG00000002480	MTREX	100	85.564	ENSCSAG00000016445	MTREX	100	85.564	Chlorocebus_sabaeus
ENSTGUG00000002480	MTREX	69	100.000	ENSCHOG00000010936	-	70	100.000	Choloepus_hoffmanni
ENSTGUG00000002480	MTREX	100	91.522	ENSCPBG00000026551	MTREX	94	92.189	Chrysemys_picta_bellii
ENSTGUG00000002480	MTREX	99	66.411	ENSCING00000003239	-	99	66.411	Ciona_intestinalis
ENSTGUG00000002480	MTREX	99	65.451	ENSCSAVG00000009304	-	100	69.892	Ciona_savignyi
ENSTGUG00000002480	MTREX	100	89.837	ENSCANG00000035770	MTREX	100	89.837	Colobus_angolensis_palliatus
ENSTGUG00000002480	MTREX	100	90.202	ENSCGRG00001024680	Mtrex	100	90.412	Cricetulus_griseus_chok1gshd
ENSTGUG00000002480	MTREX	100	90.202	ENSCGRG00000000307	Mtrex	100	90.412	Cricetulus_griseus_crigri
ENSTGUG00000002480	MTREX	100	81.058	ENSCSEG00000018621	mtrex	98	81.058	Cynoglossus_semilaevis
ENSTGUG00000002480	MTREX	100	82.342	ENSCVAG00000004556	mtrex	100	82.342	Cyprinodon_variegatus
ENSTGUG00000002480	MTREX	100	84.519	ENSDARG00000013457	mtrex	100	84.519	Danio_rerio
ENSTGUG00000002480	MTREX	100	89.112	ENSDNOG00000015375	MTREX	100	89.112	Dasypus_novemcinctus
ENSTGUG00000002480	MTREX	100	89.635	ENSDORG00000006782	Mtrex	100	89.837	Dipodomys_ordii
ENSTGUG00000002480	MTREX	98	63.285	FBgn0001986	Mtr4	96	64.055	Drosophila_melanogaster
ENSTGUG00000002480	MTREX	90	73.204	ENSETEG00000000727	MTREX	90	73.379	Echinops_telfairi
ENSTGUG00000002480	MTREX	99	74.783	ENSEBUG00000012869	mtrex	99	74.783	Eptatretus_burgeri
ENSTGUG00000002480	MTREX	100	90.221	ENSEASG00005013270	MTREX	100	90.221	Equus_asinus_asinus
ENSTGUG00000002480	MTREX	100	90.316	ENSECAG00000023723	MTREX	100	95.370	Equus_caballus
ENSTGUG00000002480	MTREX	98	81.287	ENSEEUG00000000527	MTREX	100	81.500	Erinaceus_europaeus
ENSTGUG00000002480	MTREX	98	83.691	ENSELUG00000004898	mtrex	100	88.025	Esox_lucius
ENSTGUG00000002480	MTREX	100	89.837	ENSFCAG00000010575	MTREX	100	89.837	Felis_catus
ENSTGUG00000002480	MTREX	100	98.068	ENSFALG00000010850	MTREX	100	98.068	Ficedula_albicollis
ENSTGUG00000002480	MTREX	100	89.241	ENSFDAG00000011199	MTREX	100	89.241	Fukomys_damarensis
ENSTGUG00000002480	MTREX	100	82.212	ENSFHEG00000023014	mtrex	100	80.962	Fundulus_heteroclitus
ENSTGUG00000002480	MTREX	100	79.539	ENSGMOG00000014702	mtrex	100	79.635	Gadus_morhua
ENSTGUG00000002480	MTREX	100	93.237	ENSGALG00000014709	MTREX	86	93.237	Gallus_gallus
ENSTGUG00000002480	MTREX	100	82.212	ENSGAFG00000012425	mtrex	100	82.325	Gambusia_affinis
ENSTGUG00000002480	MTREX	100	78.044	ENSGACG00000016260	mtrex	96	83.696	Gasterosteus_aculeatus
ENSTGUG00000002480	MTREX	100	91.610	ENSGAGG00000020036	MTREX	100	91.610	Gopherus_agassizii
ENSTGUG00000002480	MTREX	100	89.933	ENSGGOG00000001867	MTREX	100	89.933	Gorilla_gorilla
ENSTGUG00000002480	MTREX	100	82.037	ENSHBUG00000006229	mtrex	100	82.133	Haplochromis_burtoni
ENSTGUG00000002480	MTREX	100	89.712	ENSHGLG00000019445	SKIV2L2	100	89.712	Heterocephalus_glaber_female
ENSTGUG00000002480	MTREX	100	89.712	ENSHGLG00100011833	SKIV2L2	100	89.712	Heterocephalus_glaber_male
ENSTGUG00000002480	MTREX	91	82.994	ENSHCOG00000019995	mtrex	100	82.994	Hippocampus_comes
ENSTGUG00000002480	MTREX	100	83.589	ENSIPUG00000024348	skiv2l2	100	83.638	Ictalurus_punctatus
ENSTGUG00000002480	MTREX	100	89.635	ENSSTOG00000010802	MTREX	100	89.837	Ictidomys_tridecemlineatus
ENSTGUG00000002480	MTREX	100	84.266	ENSJJAG00000020975	Mtrex	100	84.266	Jaculus_jaculus
ENSTGUG00000002480	MTREX	100	81.731	ENSKMAG00000012642	mtrex	100	81.731	Kryptolebias_marmoratus
ENSTGUG00000002480	MTREX	100	81.748	ENSLBEG00000019367	mtrex	99	84.150	Labrus_bergylta
ENSTGUG00000002480	MTREX	100	87.283	ENSLACG00000009075	MTREX	100	87.283	Latimeria_chalumnae
ENSTGUG00000002480	MTREX	100	85.453	ENSLOCG00000010186	mtrex	100	85.453	Lepisosteus_oculatus
ENSTGUG00000002480	MTREX	99	87.236	ENSLAFG00000010497	MTREX	100	87.236	Loxodonta_africana
ENSTGUG00000002480	MTREX	100	89.837	ENSMFAG00000031610	MTREX	100	89.837	Macaca_fascicularis
ENSTGUG00000002480	MTREX	100	88.985	ENSMMUG00000010379	MTREX	100	89.187	Macaca_mulatta
ENSTGUG00000002480	MTREX	100	89.837	ENSMNEG00000032746	MTREX	100	89.837	Macaca_nemestrina
ENSTGUG00000002480	MTREX	100	89.837	ENSMLEG00000041051	MTREX	100	89.837	Mandrillus_leucophaeus
ENSTGUG00000002480	MTREX	100	81.442	ENSMAMG00000016753	mtrex	97	85.324	Mastacembelus_armatus
ENSTGUG00000002480	MTREX	100	82.037	ENSMZEG00005000414	mtrex	100	82.133	Maylandia_zebra
ENSTGUG00000002480	MTREX	95	68.592	ENSMGAG00000003980	MTREX	99	68.592	Meleagris_gallopavo
ENSTGUG00000002480	MTREX	100	90.010	ENSMAUG00000010727	Mtrex	100	90.202	Mesocricetus_auratus
ENSTGUG00000002480	MTREX	100	89.933	ENSMICG00000012779	MTREX	100	89.933	Microcebus_murinus
ENSTGUG00000002480	MTREX	100	89.827	ENSMOCG00000019886	Mtrex	100	90.125	Microtus_ochrogaster
ENSTGUG00000002480	MTREX	100	80.596	ENSMMOG00000002476	mtrex	100	80.596	Mola_mola
ENSTGUG00000002480	MTREX	100	89.286	ENSMODG00000019494	MTREX	100	89.575	Monodelphis_domestica
ENSTGUG00000002480	MTREX	100	72.973	ENSMALG00000002917	mtrex	99	80.655	Monopterus_albus
ENSTGUG00000002480	MTREX	100	89.712	MGP_CAROLIEiJ_G0018896	Mtrex	100	89.914	Mus_caroli
ENSTGUG00000002480	MTREX	100	89.808	ENSMUSG00000016018	Mtrex	100	90.010	Mus_musculus
ENSTGUG00000002480	MTREX	100	89.519	MGP_PahariEiJ_G0015967	Mtrex	100	89.721	Mus_pahari
ENSTGUG00000002480	MTREX	100	89.808	MGP_SPRETEiJ_G0019775	Mtrex	100	90.010	Mus_spretus
ENSTGUG00000002480	MTREX	100	89.933	ENSMPUG00000007619	MTREX	100	89.933	Mustela_putorius_furo
ENSTGUG00000002480	MTREX	100	89.262	ENSMLUG00000001152	MTREX	100	89.368	Myotis_lucifugus
ENSTGUG00000002480	MTREX	100	89.837	ENSNGAG00000011938	Mtrex	100	90.038	Nannospalax_galili
ENSTGUG00000002480	MTREX	100	82.037	ENSNBRG00000011293	mtrex	100	82.133	Neolamprologus_brichardi
ENSTGUG00000002480	MTREX	100	85.742	ENSNLEG00000001494	MTREX	100	85.742	Nomascus_leucogenys
ENSTGUG00000002480	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSTGUG00000002480	MTREX	100	76.420	ENSOPRG00000008009	MTREX	100	76.420	Ochotona_princeps
ENSTGUG00000002480	MTREX	100	88.580	ENSODEG00000017234	MTREX	100	88.782	Octodon_degus
ENSTGUG00000002480	MTREX	100	81.722	ENSONIG00000007587	mtrex	100	81.818	Oreochromis_niloticus
ENSTGUG00000002480	MTREX	100	90.298	ENSOCUG00000004463	MTREX	100	90.298	Oryctolagus_cuniculus
ENSTGUG00000002480	MTREX	100	81.556	ENSORLG00000005443	mtrex	100	81.556	Oryzias_latipes
ENSTGUG00000002480	MTREX	100	81.460	ENSORLG00020006329	mtrex	100	81.460	Oryzias_latipes_hni
ENSTGUG00000002480	MTREX	100	81.460	ENSORLG00015012924	mtrex	100	81.460	Oryzias_latipes_hsok
ENSTGUG00000002480	MTREX	100	80.939	ENSOMEG00000008825	mtrex	100	80.939	Oryzias_melastigma
ENSTGUG00000002480	MTREX	100	89.251	ENSOGAG00000002886	MTREX	100	89.645	Otolemur_garnettii
ENSTGUG00000002480	MTREX	100	88.995	ENSOARG00000007764	MTREX	100	89.197	Ovis_aries
ENSTGUG00000002480	MTREX	100	89.837	ENSPPAG00000039291	MTREX	100	89.837	Pan_paniscus
ENSTGUG00000002480	MTREX	100	89.837	ENSPPRG00000019701	MTREX	100	89.837	Panthera_pardus
ENSTGUG00000002480	MTREX	100	88.303	ENSPTIG00000009313	MTREX	100	88.303	Panthera_tigris_altaica
ENSTGUG00000002480	MTREX	100	89.837	ENSPTRG00000016878	MTREX	100	89.837	Pan_troglodytes
ENSTGUG00000002480	MTREX	100	89.741	ENSPANG00000009697	MTREX	100	89.741	Papio_anubis
ENSTGUG00000002480	MTREX	100	85.192	ENSPKIG00000020833	mtrex	100	85.192	Paramormyrops_kingsleyae
ENSTGUG00000002480	MTREX	100	91.602	ENSPSIG00000012150	MTREX	100	92.204	Pelodiscus_sinensis
ENSTGUG00000002480	MTREX	100	79.750	ENSPMGG00000002582	mtrex	100	79.750	Periophthalmus_magnuspinnatus
ENSTGUG00000002480	MTREX	95	65.388	ENSPMAG00000009668	mtrex	100	65.388	Petromyzon_marinus
ENSTGUG00000002480	MTREX	91	93.453	ENSPCIG00000024730	MTREX	100	93.453	Phascolarctos_cinereus
ENSTGUG00000002480	MTREX	76	85.152	ENSPFOG00000003141	mtrex	100	85.279	Poecilia_formosa
ENSTGUG00000002480	MTREX	100	82.308	ENSPLAG00000021311	mtrex	100	82.404	Poecilia_latipinna
ENSTGUG00000002480	MTREX	92	85.714	ENSPMEG00000010597	mtrex	99	86.029	Poecilia_mexicana
ENSTGUG00000002480	MTREX	100	82.212	ENSPREG00000003089	mtrex	100	82.308	Poecilia_reticulata
ENSTGUG00000002480	MTREX	98	89.766	ENSPPYG00000015469	MTREX	98	89.766	Pongo_abelii
ENSTGUG00000002480	MTREX	94	79.070	ENSPCAG00000013120	MTREX	94	79.070	Procavia_capensis
ENSTGUG00000002480	MTREX	99	84.089	ENSPCOG00000018092	MTREX	100	84.332	Propithecus_coquereli
ENSTGUG00000002480	MTREX	100	89.837	ENSPVAG00000002445	MTREX	100	89.837	Pteropus_vampyrus
ENSTGUG00000002480	MTREX	100	81.940	ENSPNYG00000006164	mtrex	100	82.037	Pundamilia_nyererei
ENSTGUG00000002480	MTREX	100	84.918	ENSPNAG00000008794	mtrex	100	85.014	Pygocentrus_nattereri
ENSTGUG00000002480	MTREX	99	89.612	ENSRNOG00000010125	Mtrex	97	89.612	Rattus_norvegicus
ENSTGUG00000002480	MTREX	100	88.207	ENSRBIG00000034930	MTREX	100	88.207	Rhinopithecus_bieti
ENSTGUG00000002480	MTREX	100	89.933	ENSRROG00000039895	MTREX	100	89.933	Rhinopithecus_roxellana
ENSTGUG00000002480	MTREX	90	55.929	YJL050W	MTR4	99	51.811	Saccharomyces_cerevisiae
ENSTGUG00000002480	MTREX	100	89.539	ENSSBOG00000026693	MTREX	100	89.837	Saimiri_boliviensis_boliviensis
ENSTGUG00000002480	MTREX	96	91.274	ENSSHAG00000004600	MTREX	100	91.274	Sarcophilus_harrisii
ENSTGUG00000002480	MTREX	100	85.783	ENSSFOG00015014355	skiv2l2	100	85.783	Scleropages_formosus
ENSTGUG00000002480	MTREX	100	82.342	ENSSMAG00000007572	mtrex	100	82.342	Scophthalmus_maximus
ENSTGUG00000002480	MTREX	100	82.421	ENSSDUG00000023789	mtrex	100	82.421	Seriola_dumerili
ENSTGUG00000002480	MTREX	100	82.229	ENSSLDG00000006301	mtrex	100	82.229	Seriola_lalandi_dorsalis
ENSTGUG00000002480	MTREX	100	88.100	ENSSARG00000008387	MTREX	100	88.399	Sorex_araneus
ENSTGUG00000002480	MTREX	100	79.074	ENSSPUG00000007071	MTREX	100	79.364	Sphenodon_punctatus
ENSTGUG00000002480	MTREX	100	80.847	ENSSPAG00000011319	mtrex	100	81.328	Stegastes_partitus
ENSTGUG00000002480	MTREX	100	89.741	ENSSSCG00000016911	MTREX	100	89.741	Sus_scrofa
ENSTGUG00000002480	MTREX	100	81.496	ENSTRUG00000014571	mtrex	100	81.496	Takifugu_rubripes
ENSTGUG00000002480	MTREX	100	74.856	ENSTBEG00000007769	MTREX	100	75.072	Tupaia_belangeri
ENSTGUG00000002480	MTREX	100	89.423	ENSTTRG00000008678	MTREX	100	89.625	Tursiops_truncatus
ENSTGUG00000002480	MTREX	100	89.443	ENSUAMG00000023061	MTREX	100	89.645	Ursus_americanus
ENSTGUG00000002480	MTREX	100	89.007	ENSUMAG00000009373	MTREX	99	95.057	Ursus_maritimus
ENSTGUG00000002480	MTREX	100	79.962	ENSVPAG00000011174	MTREX	100	79.962	Vicugna_pacos
ENSTGUG00000002480	MTREX	100	90.221	ENSVVUG00000021337	MTREX	100	90.221	Vulpes_vulpes
ENSTGUG00000002480	MTREX	100	87.645	ENSXETG00000032798	MTREX	100	87.645	Xenopus_tropicalis
ENSTGUG00000002480	MTREX	100	82.115	ENSXMAG00000004799	mtrex	100	82.115	Xiphophorus_maculatus