EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000003179 (Gene tree)
Gene ID: -
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 95264 bases
Position: chr20:601821-697084
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000003324	ResIII	PF04851.15	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000003357	CHD6-201	8061	-	ENSTGUP00000003324	2591 (aa)	-	H0YYE6

Gene Model

Click here to download ENSTGUG00000003179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000003179	CHD6	74	63.393	ENSTGUG00000007476	CHD9	71	64.944
ENSTGUG00000003179	CHD6	78	67.661	ENSTGUG00000011196	CHD7	72	66.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003179	CHD6	78	76.326	ENSAPOG00000013736	chd6	67	74.710	Acanthochromis_polyacanthus
ENSTGUG00000003179	CHD6	99	73.766	ENSAMEG00000009496	CHD6	97	73.424	Ailuropoda_melanoleuca
ENSTGUG00000003179	CHD6	81	73.483	ENSATEG00000005608	chd6	66	74.502	Anabas_testudineus
ENSTGUG00000003179	CHD6	100	88.330	ENSAPLG00000015592	CHD6	97	88.394	Anas_platyrhynchos
ENSTGUG00000003179	CHD6	98	74.184	ENSACAG00000006842	CHD6	96	73.124	Anolis_carolinensis
ENSTGUG00000003179	CHD6	80	73.118	ENSAMXG00000009576	chd6	74	73.272	Astyanax_mexicanus
ENSTGUG00000003179	CHD6	99	72.924	ENSBTAG00000005733	CHD6	97	72.696	Bos_taurus
ENSTGUG00000003179	CHD6	99	73.712	ENSCJAG00000017920	CHD6	99	89.541	Callithrix_jacchus
ENSTGUG00000003179	CHD6	99	73.642	ENSCAFG00000009236	CHD6	97	73.908	Canis_familiaris
ENSTGUG00000003179	CHD6	99	73.754	ENSCAFG00020012906	CHD6	95	91.892	Canis_lupus_dingo
ENSTGUG00000003179	CHD6	99	72.696	ENSCHIG00000017606	CHD6	97	72.469	Capra_hircus
ENSTGUG00000003179	CHD6	86	73.136	ENSTSYG00000014635	CHD6	99	73.136	Carlito_syrichta
ENSTGUG00000003179	CHD6	99	73.642	ENSCPOG00000015641	CHD6	96	73.528	Cavia_porcellus
ENSTGUG00000003179	CHD6	99	73.652	ENSCCAG00000036828	CHD6	99	89.358	Cebus_capucinus
ENSTGUG00000003179	CHD6	99	73.467	ENSCATG00000039248	CHD6	99	89.358	Cercocebus_atys
ENSTGUG00000003179	CHD6	99	73.946	ENSCLAG00000013743	CHD6	96	73.533	Chinchilla_lanigera
ENSTGUG00000003179	CHD6	83	81.562	ENSCHOG00000012647	CHD6	85	79.861	Choloepus_hoffmanni
ENSTGUG00000003179	CHD6	98	84.083	ENSCPBG00000019382	CHD6	97	83.803	Chrysemys_picta_bellii
ENSTGUG00000003179	CHD6	95	80.379	ENSCANG00000043435	CHD6	99	89.358	Colobus_angolensis_palliatus
ENSTGUG00000003179	CHD6	99	73.003	ENSCGRG00001002694	Chd6	97	72.662	Cricetulus_griseus_chok1gshd
ENSTGUG00000003179	CHD6	82	76.312	ENSDARG00000017244	chd6	75	77.536	Danio_rerio
ENSTGUG00000003179	CHD6	93	80.739	ENSDNOG00000004176	CHD6	90	79.989	Dasypus_novemcinctus
ENSTGUG00000003179	CHD6	99	73.348	ENSEASG00005023433	CHD6	95	93.822	Equus_asinus_asinus
ENSTGUG00000003179	CHD6	99	73.389	ENSECAG00000011761	CHD6	97	73.306	Equus_caballus
ENSTGUG00000003179	CHD6	75	79.240	ENSELUG00000012309	chd6	92	79.240	Esox_lucius
ENSTGUG00000003179	CHD6	99	73.834	ENSFCAG00000003572	CHD6	97	73.762	Felis_catus
ENSTGUG00000003179	CHD6	100	93.157	ENSFALG00000012563	CHD6	96	93.157	Ficedula_albicollis
ENSTGUG00000003179	CHD6	99	73.810	ENSFDAG00000013791	CHD6	97	73.399	Fukomys_damarensis
ENSTGUG00000003179	CHD6	77	70.237	ENSGMOG00000011715	chd6	85	71.196	Gadus_morhua
ENSTGUG00000003179	CHD6	80	70.730	ENSGACG00000000037	chd6	83	72.324	Gasterosteus_aculeatus
ENSTGUG00000003179	CHD6	81	71.798	ENSHBUG00000014701	chd6	67	72.558	Haplochromis_burtoni
ENSTGUG00000003179	CHD6	99	73.285	ENSHGLG00000004548	CHD6	97	73.217	Heterocephalus_glaber_female
ENSTGUG00000003179	CHD6	99	73.285	ENSHGLG00100006401	CHD6	97	73.217	Heterocephalus_glaber_male
ENSTGUG00000003179	CHD6	79	77.612	ENSIPUG00000003692	chd6	73	78.051	Ictalurus_punctatus
ENSTGUG00000003179	CHD6	99	73.245	ENSSTOG00000013382	CHD6	97	72.941	Ictidomys_tridecemlineatus
ENSTGUG00000003179	CHD6	88	75.451	ENSLACG00000010881	CHD6	86	76.335	Latimeria_chalumnae
ENSTGUG00000003179	CHD6	73	82.130	ENSLOCG00000007386	chd6	81	80.147	Lepisosteus_oculatus
ENSTGUG00000003179	CHD6	99	73.976	ENSLAFG00000012144	CHD6	97	73.752	Loxodonta_africana
ENSTGUG00000003179	CHD6	99	73.591	ENSMFAG00000032830	CHD6	99	89.358	Macaca_fascicularis
ENSTGUG00000003179	CHD6	99	73.517	ENSMMUG00000020458	CHD6	99	89.358	Macaca_mulatta
ENSTGUG00000003179	CHD6	99	73.429	ENSMNEG00000040847	CHD6	99	89.358	Macaca_nemestrina
ENSTGUG00000003179	CHD6	100	73.666	ENSMLEG00000031965	CHD6	99	89.358	Mandrillus_leucophaeus
ENSTGUG00000003179	CHD6	81	72.294	ENSMAMG00000013111	chd6	66	74.165	Mastacembelus_armatus
ENSTGUG00000003179	CHD6	100	88.251	ENSMGAG00000001121	CHD6	97	88.175	Meleagris_gallopavo
ENSTGUG00000003179	CHD6	99	73.744	ENSMICG00000016641	CHD6	99	88.991	Microcebus_murinus
ENSTGUG00000003179	CHD6	86	82.750	ENSMODG00000000720	-	93	82.803	Monodelphis_domestica
ENSTGUG00000003179	CHD6	100	72.456	MGP_CAROLIEiJ_G0024604	Chd6	93	88.869	Mus_caroli
ENSTGUG00000003179	CHD6	100	72.428	ENSMUSG00000057133	Chd6	93	88.688	Mus_musculus
ENSTGUG00000003179	CHD6	100	72.401	MGP_PahariEiJ_G0026048	Chd6	93	89.050	Mus_pahari
ENSTGUG00000003179	CHD6	100	72.422	MGP_SPRETEiJ_G0025526	Chd6	93	88.778	Mus_spretus
ENSTGUG00000003179	CHD6	99	73.036	ENSMPUG00000017695	CHD6	97	73.054	Mustela_putorius_furo
ENSTGUG00000003179	CHD6	99	73.023	ENSMLUG00000016247	CHD6	97	72.902	Myotis_lucifugus
ENSTGUG00000003179	CHD6	81	73.930	ENSNBRG00000013839	chd6	81	72.848	Neolamprologus_brichardi
ENSTGUG00000003179	CHD6	83	75.531	ENSONIG00000000393	chd6	82	76.034	Oreochromis_niloticus
ENSTGUG00000003179	CHD6	99	68.018	ENSOANG00000014347	CHD6	96	67.967	Ornithorhynchus_anatinus
ENSTGUG00000003179	CHD6	99	72.372	ENSOCUG00000012394	CHD6	97	71.954	Oryctolagus_cuniculus
ENSTGUG00000003179	CHD6	81	74.801	ENSORLG00020021891	chd6	95	86.774	Oryzias_latipes_hni
ENSTGUG00000003179	CHD6	93	80.500	ENSOGAG00000002427	CHD6	90	79.576	Otolemur_garnettii
ENSTGUG00000003179	CHD6	99	71.022	ENSOARG00000002597	CHD6	97	70.522	Ovis_aries
ENSTGUG00000003179	CHD6	99	73.900	ENSPPRG00000014756	CHD6	97	73.828	Panthera_pardus
ENSTGUG00000003179	CHD6	99	73.862	ENSPTIG00000011094	CHD6	97	73.790	Panthera_tigris_altaica
ENSTGUG00000003179	CHD6	99	73.694	ENSPANG00000025554	CHD6	99	89.541	Papio_anubis
ENSTGUG00000003179	CHD6	79	78.908	ENSPKIG00000005578	chd6	78	80.337	Paramormyrops_kingsleyae
ENSTGUG00000003179	CHD6	84	70.062	ENSPMGG00000014877	chd6	94	70.186	Periophthalmus_magnuspinnatus
ENSTGUG00000003179	CHD6	92	82.367	ENSPCIG00000028037	CHD6	91	82.067	Phascolarctos_cinereus
ENSTGUG00000003179	CHD6	76	73.755	ENSPLAG00000003128	chd6	68	74.407	Poecilia_latipinna
ENSTGUG00000003179	CHD6	74	83.948	ENSPREG00000022653	chd6	99	87.363	Poecilia_reticulata
ENSTGUG00000003179	CHD6	69	80.011	ENSPPYG00000011016	CHD6	66	79.721	Pongo_abelii
ENSTGUG00000003179	CHD6	99	73.760	ENSPCOG00000001089	CHD6	99	89.174	Propithecus_coquereli
ENSTGUG00000003179	CHD6	81	75.632	ENSPNYG00000022516	chd6	75	78.892	Pundamilia_nyererei
ENSTGUG00000003179	CHD6	79	74.803	ENSPNAG00000012825	chd6	75	75.346	Pygocentrus_nattereri
ENSTGUG00000003179	CHD6	100	72.727	ENSRNOG00000016744	Chd6	97	72.487	Rattus_norvegicus
ENSTGUG00000003179	CHD6	99	73.538	ENSSBOG00000022089	CHD6	99	89.358	Saimiri_boliviensis_boliviensis
ENSTGUG00000003179	CHD6	93	81.855	ENSSHAG00000017072	CHD6	91	81.519	Sarcophilus_harrisii
ENSTGUG00000003179	CHD6	89	75.369	ENSSFOG00015012920	chd6	78	75.326	Scleropages_formosus
ENSTGUG00000003179	CHD6	59	98.684	ENSSARG00000002615	-	58	98.684	Sorex_araneus
ENSTGUG00000003179	CHD6	99	73.478	ENSSSCG00000007360	CHD6	97	73.584	Sus_scrofa
ENSTGUG00000003179	CHD6	75	76.950	ENSTNIG00000017487	chd6	82	76.950	Tetraodon_nigroviridis
ENSTGUG00000003179	CHD6	98	71.013	ENSTTRG00000013438	CHD6	94	87.566	Tursiops_truncatus
ENSTGUG00000003179	CHD6	99	72.448	ENSUAMG00000024036	CHD6	95	91.892	Ursus_americanus
ENSTGUG00000003179	CHD6	99	73.538	ENSUMAG00000002017	CHD6	95	91.892	Ursus_maritimus
ENSTGUG00000003179	CHD6	86	81.558	ENSVPAG00000007941	CHD6	84	80.347	Vicugna_pacos
ENSTGUG00000003179	CHD6	99	73.842	ENSVVUG00000029164	CHD6	97	73.918	Vulpes_vulpes
ENSTGUG00000003179	CHD6	86	74.438	ENSXETG00000021445	chd6	84	73.818	Xenopus_tropicalis