EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000003236 (Gene tree)
Gene ID: 100230163
Gene Symbol: RAB5A
Alias: RAB5
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 9812 bases
Position: chr2:55908398-55918209
Accession: 100230163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000003339	MMR_HSR1	PF01926.23	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000003373	RAB5A-201	1284	-	ENSTGUP00000003339	215 (aa)	XP_002196933	H0YYG1

Gene Model

Click here to download ENSTGUG00000003236's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu04144	Endocytosis	KEGG
tgu04145	Phagosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000003236	RAB5A	89	38.614	ENSTGUG00000006657	RAB14	94	38.614
ENSTGUG00000003236	RAB5A	90	37.949	ENSTGUG00000009359	RAB35	96	37.949
ENSTGUG00000003236	RAB5A	81	37.500	ENSTGUG00000001105	-	88	37.500
ENSTGUG00000003236	RAB5A	83	31.667	ENSTGUG00000000988	NRAS	95	33.702
ENSTGUG00000003236	RAB5A	75	42.236	ENSTGUG00000011182	RAB2A	76	42.236
ENSTGUG00000003236	RAB5A	90	43.069	ENSTGUG00000003680	-	99	43.069
ENSTGUG00000003236	RAB5A	78	32.544	ENSTGUG00000012235	KRAS	90	32.164
ENSTGUG00000003236	RAB5A	96	48.325	ENSTGUG00000003786	RAB17	96	48.325
ENSTGUG00000003236	RAB5A	93	30.144	ENSTGUG00000007747	-	98	30.144
ENSTGUG00000003236	RAB5A	90	43.500	ENSTGUG00000003675	RAB25	93	43.500
ENSTGUG00000003236	RAB5A	90	48.969	ENSTGUG00000008195	RAB22A	98	48.969
ENSTGUG00000003236	RAB5A	91	42.718	ENSTGUG00000000084	-	94	42.718
ENSTGUG00000003236	RAB5A	90	44.330	ENSTGUG00000002328	RAB1A	95	44.330
ENSTGUG00000003236	RAB5A	78	41.860	ENSTGUG00000007832	RAB7A	83	41.860
ENSTGUG00000003236	RAB5A	74	34.756	ENSTGUG00000016028	-	77	34.756
ENSTGUG00000003236	RAB5A	74	36.478	ENSTGUG00000013171	-	95	36.478
ENSTGUG00000003236	RAB5A	55	30.952	ENSTGUG00000002488	ARL4A	60	30.952
ENSTGUG00000003236	RAB5A	81	40.000	ENSTGUG00000002436	RAB33B	79	40.000
ENSTGUG00000003236	RAB5A	74	35.404	ENSTGUG00000012794	RAB23	73	34.682
ENSTGUG00000003236	RAB5A	78	31.737	ENSTGUG00000017468	-	79	31.737
ENSTGUG00000003236	RAB5A	91	42.647	ENSTGUG00000009279	RAB11A	94	42.647
ENSTGUG00000003236	RAB5A	79	36.842	ENSTGUG00000009889	RAB12	81	34.975
ENSTGUG00000003236	RAB5A	95	40.865	ENSTGUG00000013470	RAB6A	99	40.865
ENSTGUG00000003236	RAB5A	81	33.708	ENSTGUG00000009985	-	74	33.708
ENSTGUG00000003236	RAB5A	75	40.964	ENSTGUG00000005228	RAB33A	81	40.964
ENSTGUG00000003236	RAB5A	83	30.000	ENSTGUG00000009877	HRAS	94	30.000
ENSTGUG00000003236	RAB5A	76	36.364	ENSTGUG00000009776	-	95	36.364
ENSTGUG00000003236	RAB5A	78	45.238	ENSTGUG00000012941	RAB30	83	45.238
ENSTGUG00000003236	RAB5A	78	36.047	ENSTGUG00000006516	RAB9B	97	33.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003236	RAB5A	100	95.814	ENSG00000144566	RAB5A	100	95.814	Homo_sapiens
ENSTGUG00000003236	RAB5A	100	92.130	ENSAPOG00000021391	rab5aa	100	92.130	Acanthochromis_polyacanthus
ENSTGUG00000003236	RAB5A	100	96.279	ENSAMEG00000000954	RAB5A	100	96.279	Ailuropoda_melanoleuca
ENSTGUG00000003236	RAB5A	100	92.593	ENSACIG00000019251	rab5aa	100	92.593	Amphilophus_citrinellus
ENSTGUG00000003236	RAB5A	100	93.056	ENSAOCG00000000090	rab5aa	100	93.056	Amphiprion_ocellaris
ENSTGUG00000003236	RAB5A	100	93.056	ENSAPEG00000013376	rab5aa	100	93.056	Amphiprion_percula
ENSTGUG00000003236	RAB5A	100	92.593	ENSATEG00000014748	rab5aa	100	92.593	Anabas_testudineus
ENSTGUG00000003236	RAB5A	100	95.814	ENSACAG00000000017	RAB5A	100	95.814	Anolis_carolinensis
ENSTGUG00000003236	RAB5A	100	96.279	ENSANAG00000025120	RAB5A	100	96.279	Aotus_nancymaae
ENSTGUG00000003236	RAB5A	100	93.056	ENSACLG00000018066	rab5aa	100	93.056	Astatotilapia_calliptera
ENSTGUG00000003236	RAB5A	100	92.130	ENSAMXG00000036179	rab5aa	100	92.130	Astyanax_mexicanus
ENSTGUG00000003236	RAB5A	100	91.705	ENSAMXG00000035919	rab5ab	100	91.705	Astyanax_mexicanus
ENSTGUG00000003236	RAB5A	100	95.814	ENSBTAG00000046385	RAB5A	100	95.814	Bos_taurus
ENSTGUG00000003236	RAB5A	100	96.279	ENSCJAG00000048394	RAB5A	100	96.279	Callithrix_jacchus
ENSTGUG00000003236	RAB5A	100	96.279	ENSCAFG00000005814	RAB5A	100	96.279	Canis_familiaris
ENSTGUG00000003236	RAB5A	100	96.279	ENSCAFG00020027287	RAB5A	100	96.279	Canis_lupus_dingo
ENSTGUG00000003236	RAB5A	100	95.349	ENSCHIG00000025419	-	100	95.349	Capra_hircus
ENSTGUG00000003236	RAB5A	100	95.814	ENSTSYG00000007642	-	100	95.814	Carlito_syrichta
ENSTGUG00000003236	RAB5A	100	89.767	ENSTSYG00000030238	-	100	89.767	Carlito_syrichta
ENSTGUG00000003236	RAB5A	100	96.279	ENSCCAG00000022405	RAB5A	100	96.279	Cebus_capucinus
ENSTGUG00000003236	RAB5A	100	96.279	ENSCATG00000033588	-	100	96.279	Cercocebus_atys
ENSTGUG00000003236	RAB5A	100	95.814	ENSCLAG00000006053	-	100	95.814	Chinchilla_lanigera
ENSTGUG00000003236	RAB5A	100	96.279	ENSCSAG00000009831	RAB5A	100	96.279	Chlorocebus_sabaeus
ENSTGUG00000003236	RAB5A	100	97.209	ENSCPBG00000022559	RAB5A	100	97.209	Chrysemys_picta_bellii
ENSTGUG00000003236	RAB5A	100	96.279	ENSCANG00000043514	RAB5A	100	96.279	Colobus_angolensis_palliatus
ENSTGUG00000003236	RAB5A	100	94.884	ENSCGRG00001020018	-	100	94.884	Cricetulus_griseus_chok1gshd
ENSTGUG00000003236	RAB5A	100	94.884	ENSCGRG00000002786	-	100	94.884	Cricetulus_griseus_crigri
ENSTGUG00000003236	RAB5A	99	92.093	ENSCVAG00000008239	rab5aa	99	92.093	Cyprinodon_variegatus
ENSTGUG00000003236	RAB5A	99	92.093	ENSDARG00000007257	rab5ab	99	92.093	Danio_rerio
ENSTGUG00000003236	RAB5A	100	92.593	ENSDARG00000018602	rab5aa	100	92.593	Danio_rerio
ENSTGUG00000003236	RAB5A	100	95.814	ENSDNOG00000038467	RAB5A	100	95.814	Dasypus_novemcinctus
ENSTGUG00000003236	RAB5A	100	96.279	ENSDORG00000024958	-	100	96.279	Dipodomys_ordii
ENSTGUG00000003236	RAB5A	100	95.814	ENSEASG00005005818	RAB5A	100	95.814	Equus_asinus_asinus
ENSTGUG00000003236	RAB5A	100	96.279	ENSECAG00000019062	RAB5A	100	96.279	Equus_caballus
ENSTGUG00000003236	RAB5A	100	95.349	ENSEEUG00000009044	RAB5A	100	95.349	Erinaceus_europaeus
ENSTGUG00000003236	RAB5A	99	91.628	ENSELUG00000013436	rab5ab	99	91.628	Esox_lucius
ENSTGUG00000003236	RAB5A	100	92.130	ENSELUG00000006462	rab5aa	100	92.130	Esox_lucius
ENSTGUG00000003236	RAB5A	100	96.279	ENSFCAG00000039795	-	100	96.279	Felis_catus
ENSTGUG00000003236	RAB5A	100	99.535	ENSFALG00000009239	RAB5A	100	99.535	Ficedula_albicollis
ENSTGUG00000003236	RAB5A	100	95.349	ENSFDAG00000005631	-	100	95.349	Fukomys_damarensis
ENSTGUG00000003236	RAB5A	99	93.488	ENSFHEG00000014070	rab5aa	99	93.488	Fundulus_heteroclitus
ENSTGUG00000003236	RAB5A	84	94.475	ENSGMOG00000007127	RAB5A	99	94.475	Gadus_morhua
ENSTGUG00000003236	RAB5A	99	90.698	ENSGMOG00000002868	rab5aa	99	90.698	Gadus_morhua
ENSTGUG00000003236	RAB5A	100	99.070	ENSGALG00000011272	RAB5A	100	99.070	Gallus_gallus
ENSTGUG00000003236	RAB5A	99	92.093	ENSGAFG00000011619	rab5aa	99	92.093	Gambusia_affinis
ENSTGUG00000003236	RAB5A	100	90.741	ENSGACG00000004997	rab5aa	100	90.741	Gasterosteus_aculeatus
ENSTGUG00000003236	RAB5A	100	97.674	ENSGAGG00000005319	RAB5A	100	97.674	Gopherus_agassizii
ENSTGUG00000003236	RAB5A	100	95.814	ENSGGOG00000015981	RAB5A	100	95.814	Gorilla_gorilla
ENSTGUG00000003236	RAB5A	100	93.056	ENSHBUG00000003752	rab5aa	100	93.056	Haplochromis_burtoni
ENSTGUG00000003236	RAB5A	99	87.850	ENSHGLG00000017749	-	97	87.850	Heterocephalus_glaber_female
ENSTGUG00000003236	RAB5A	96	97.585	ENSHGLG00000006357	-	99	97.585	Heterocephalus_glaber_female
ENSTGUG00000003236	RAB5A	99	87.850	ENSHGLG00100008816	-	97	87.850	Heterocephalus_glaber_male
ENSTGUG00000003236	RAB5A	100	96.279	ENSHGLG00100007553	RAB5A	100	96.279	Heterocephalus_glaber_male
ENSTGUG00000003236	RAB5A	100	90.783	ENSIPUG00000023392	rab5a	100	90.783	Ictalurus_punctatus
ENSTGUG00000003236	RAB5A	100	95.814	ENSSTOG00000026229	RAB5A	100	95.814	Ictidomys_tridecemlineatus
ENSTGUG00000003236	RAB5A	100	95.349	ENSJJAG00000020190	Rab5a	100	95.349	Jaculus_jaculus
ENSTGUG00000003236	RAB5A	100	92.130	ENSKMAG00000005111	rab5aa	100	92.130	Kryptolebias_marmoratus
ENSTGUG00000003236	RAB5A	98	92.857	ENSLBEG00000002516	rab5aa	93	92.857	Labrus_bergylta
ENSTGUG00000003236	RAB5A	100	93.519	ENSLACG00000004663	RAB5A	100	93.519	Latimeria_chalumnae
ENSTGUG00000003236	RAB5A	100	93.981	ENSLOCG00000006591	rab5ab	100	93.981	Lepisosteus_oculatus
ENSTGUG00000003236	RAB5A	100	95.814	ENSLAFG00000008321	RAB5A	100	95.814	Loxodonta_africana
ENSTGUG00000003236	RAB5A	100	96.279	ENSMFAG00000002326	RAB5A	100	96.279	Macaca_fascicularis
ENSTGUG00000003236	RAB5A	69	95.302	ENSMMUG00000032398	-	87	95.302	Macaca_mulatta
ENSTGUG00000003236	RAB5A	83	97.765	ENSMMUG00000006992	RAB5A	91	97.765	Macaca_mulatta
ENSTGUG00000003236	RAB5A	100	96.279	ENSMNEG00000039149	-	100	96.279	Macaca_nemestrina
ENSTGUG00000003236	RAB5A	100	96.279	ENSMLEG00000028944	RAB5A	100	96.279	Mandrillus_leucophaeus
ENSTGUG00000003236	RAB5A	100	93.056	ENSMAMG00000012573	rab5aa	100	93.056	Mastacembelus_armatus
ENSTGUG00000003236	RAB5A	100	93.056	ENSMZEG00005005205	rab5aa	100	93.056	Maylandia_zebra
ENSTGUG00000003236	RAB5A	100	98.605	ENSMGAG00000010961	RAB5A	100	98.605	Meleagris_gallopavo
ENSTGUG00000003236	RAB5A	100	95.814	ENSMAUG00000011242	-	100	95.814	Mesocricetus_auratus
ENSTGUG00000003236	RAB5A	100	96.279	ENSMICG00000049130	RAB5A	100	96.279	Microcebus_murinus
ENSTGUG00000003236	RAB5A	100	95.814	ENSMOCG00000009706	Rab5a	100	95.814	Microtus_ochrogaster
ENSTGUG00000003236	RAB5A	100	92.593	ENSMMOG00000019135	rab5aa	100	92.593	Mola_mola
ENSTGUG00000003236	RAB5A	100	95.814	ENSMODG00000014793	RAB5A	100	95.814	Monodelphis_domestica
ENSTGUG00000003236	RAB5A	100	92.593	ENSMALG00000014929	rab5aa	100	92.593	Monopterus_albus
ENSTGUG00000003236	RAB5A	100	95.814	MGP_CAROLIEiJ_G0021741	Rab5a	100	95.814	Mus_caroli
ENSTGUG00000003236	RAB5A	100	95.814	ENSMUSG00000017831	Rab5a	100	95.814	Mus_musculus
ENSTGUG00000003236	RAB5A	87	94.624	MGP_PahariEiJ_G0020730	Rab5a	99	94.624	Mus_pahari
ENSTGUG00000003236	RAB5A	100	96.279	ENSMPUG00000013147	RAB5A	100	96.279	Mustela_putorius_furo
ENSTGUG00000003236	RAB5A	100	96.279	ENSMLUG00000011716	RAB5A	100	96.279	Myotis_lucifugus
ENSTGUG00000003236	RAB5A	100	95.349	ENSNGAG00000021245	-	100	95.349	Nannospalax_galili
ENSTGUG00000003236	RAB5A	100	93.056	ENSNBRG00000011763	rab5aa	100	93.056	Neolamprologus_brichardi
ENSTGUG00000003236	RAB5A	100	95.814	ENSNLEG00000003434	RAB5A	100	95.814	Nomascus_leucogenys
ENSTGUG00000003236	RAB5A	82	97.740	ENSOPRG00000011278	RAB5A	100	97.740	Ochotona_princeps
ENSTGUG00000003236	RAB5A	68	98.630	ENSODEG00000000290	-	99	98.630	Octodon_degus
ENSTGUG00000003236	RAB5A	87	87.895	ENSODEG00000019065	-	100	87.895	Octodon_degus
ENSTGUG00000003236	RAB5A	100	93.056	ENSONIG00000002425	rab5aa	100	93.056	Oreochromis_niloticus
ENSTGUG00000003236	RAB5A	99	95.283	ENSOANG00000004989	RAB5A	97	95.283	Ornithorhynchus_anatinus
ENSTGUG00000003236	RAB5A	100	95.814	ENSOCUG00000012200	RAB5A	100	95.814	Oryctolagus_cuniculus
ENSTGUG00000003236	RAB5A	100	92.593	ENSORLG00000012261	rab5aa	100	92.593	Oryzias_latipes
ENSTGUG00000003236	RAB5A	100	92.593	ENSORLG00020020922	rab5aa	100	92.593	Oryzias_latipes_hni
ENSTGUG00000003236	RAB5A	100	92.593	ENSORLG00015012854	rab5aa	100	92.593	Oryzias_latipes_hsok
ENSTGUG00000003236	RAB5A	100	92.130	ENSORLG00015017737	rab5ab	100	92.130	Oryzias_latipes_hsok
ENSTGUG00000003236	RAB5A	100	92.130	ENSOMEG00000010692	rab5aa	100	92.130	Oryzias_melastigma
ENSTGUG00000003236	RAB5A	100	95.349	ENSOARG00000015722	RAB5A	100	95.349	Ovis_aries
ENSTGUG00000003236	RAB5A	100	95.370	ENSPPAG00000041763	RAB5A	100	95.370	Pan_paniscus
ENSTGUG00000003236	RAB5A	100	96.279	ENSPPRG00000001655	-	100	96.279	Panthera_pardus
ENSTGUG00000003236	RAB5A	100	96.279	ENSPTIG00000021685	RAB5A	100	96.279	Panthera_tigris_altaica
ENSTGUG00000003236	RAB5A	100	95.370	ENSPTRG00000014682	RAB5A	100	95.370	Pan_troglodytes
ENSTGUG00000003236	RAB5A	100	96.279	ENSPANG00000001328	RAB5A	100	96.279	Papio_anubis
ENSTGUG00000003236	RAB5A	100	88.889	ENSPKIG00000010291	RAB5A	100	88.889	Paramormyrops_kingsleyae
ENSTGUG00000003236	RAB5A	100	93.056	ENSPKIG00000009578	rab5ab	100	93.056	Paramormyrops_kingsleyae
ENSTGUG00000003236	RAB5A	100	98.140	ENSPSIG00000007157	RAB5A	100	98.140	Pelodiscus_sinensis
ENSTGUG00000003236	RAB5A	100	92.130	ENSPMGG00000001915	rab5aa	100	92.130	Periophthalmus_magnuspinnatus
ENSTGUG00000003236	RAB5A	100	96.744	ENSPCIG00000018321	RAB5A	100	96.744	Phascolarctos_cinereus
ENSTGUG00000003236	RAB5A	99	92.558	ENSPFOG00000011263	rab5aa	99	92.558	Poecilia_formosa
ENSTGUG00000003236	RAB5A	99	92.558	ENSPLAG00000017838	rab5aa	99	92.558	Poecilia_latipinna
ENSTGUG00000003236	RAB5A	99	92.558	ENSPMEG00000007238	rab5aa	99	92.558	Poecilia_mexicana
ENSTGUG00000003236	RAB5A	100	95.814	ENSPPYG00000014074	RAB5A	100	95.814	Pongo_abelii
ENSTGUG00000003236	RAB5A	100	96.279	ENSPCOG00000013289	RAB5A	100	96.279	Propithecus_coquereli
ENSTGUG00000003236	RAB5A	100	95.814	ENSPVAG00000006730	RAB5A	100	95.814	Pteropus_vampyrus
ENSTGUG00000003236	RAB5A	100	93.056	ENSPNYG00000010612	rab5aa	100	93.056	Pundamilia_nyererei
ENSTGUG00000003236	RAB5A	100	92.130	ENSPNAG00000023223	rab5aa	100	92.130	Pygocentrus_nattereri
ENSTGUG00000003236	RAB5A	100	91.244	ENSPNAG00000009496	rab5ab	100	91.244	Pygocentrus_nattereri
ENSTGUG00000003236	RAB5A	100	96.279	ENSRBIG00000036122	RAB5A	100	96.279	Rhinopithecus_bieti
ENSTGUG00000003236	RAB5A	100	96.279	ENSRROG00000037687	RAB5A	100	96.279	Rhinopithecus_roxellana
ENSTGUG00000003236	RAB5A	100	96.296	ENSSHAG00000006787	RAB5A	100	96.296	Sarcophilus_harrisii
ENSTGUG00000003236	RAB5A	98	93.365	ENSSFOG00015021115	-	98	93.365	Scleropages_formosus
ENSTGUG00000003236	RAB5A	100	93.056	ENSSFOG00015014517	rab5a	100	93.056	Scleropages_formosus
ENSTGUG00000003236	RAB5A	100	92.593	ENSSMAG00000009229	rab5aa	100	92.593	Scophthalmus_maximus
ENSTGUG00000003236	RAB5A	100	93.056	ENSSDUG00000009835	rab5aa	100	93.056	Seriola_dumerili
ENSTGUG00000003236	RAB5A	100	93.056	ENSSLDG00000011069	rab5aa	100	93.056	Seriola_lalandi_dorsalis
ENSTGUG00000003236	RAB5A	87	98.930	ENSSPUG00000001173	RAB5A	96	98.930	Sphenodon_punctatus
ENSTGUG00000003236	RAB5A	100	93.056	ENSSPAG00000015678	rab5aa	100	93.056	Stegastes_partitus
ENSTGUG00000003236	RAB5A	100	94.884	ENSSSCG00000037653	RAB5A	100	94.884	Sus_scrofa
ENSTGUG00000003236	RAB5A	99	92.093	ENSTRUG00000024368	rab5aa	99	92.093	Takifugu_rubripes
ENSTGUG00000003236	RAB5A	100	92.130	ENSTNIG00000009196	rab5aa	100	92.130	Tetraodon_nigroviridis
ENSTGUG00000003236	RAB5A	100	96.279	ENSTTRG00000001374	RAB5A	100	96.279	Tursiops_truncatus
ENSTGUG00000003236	RAB5A	100	90.393	ENSUAMG00000027471	RAB5A	99	96.175	Ursus_americanus
ENSTGUG00000003236	RAB5A	100	96.279	ENSUMAG00000018295	RAB5A	100	96.279	Ursus_maritimus
ENSTGUG00000003236	RAB5A	100	96.279	ENSVVUG00000000489	RAB5A	100	96.279	Vulpes_vulpes
ENSTGUG00000003236	RAB5A	100	93.056	ENSXETG00000002305	rab5a	100	93.056	Xenopus_tropicalis
ENSTGUG00000003236	RAB5A	99	92.093	ENSXCOG00000020121	rab5aa	99	92.093	Xiphophorus_couchianus
ENSTGUG00000003236	RAB5A	99	92.558	ENSXMAG00000028889	rab5aa	99	92.558	Xiphophorus_maculatus