EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000003316 (Gene tree)
Gene ID: 100221119
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 23522 bases
Position: chr7:2083150-2106671
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000003438	KH_1	PF00013.29	1.7e-45	1	2
ENSTGUP00000003438	KH_1	PF00013.29	1.7e-45	2	2
ENSTGUP00000003438	KH_2	PF07650.17	3.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000003472	-	1017	-	ENSTGUP00000003438	339 (aa)	-	H0YYQ9

Gene Model

Click here to download ENSTGUG00000003316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000003316	-	94	40.351	ENSTGUG00000011799	NOVA1	59	40.351
ENSTGUG00000003316	-	96	59.077	ENSTGUG00000016232	PCBP2	99	59.077
ENSTGUG00000003316	-	71	47.674	ENSTGUG00000003138	HNRNPK	56	47.674
ENSTGUG00000003316	-	95	33.582	ENSTGUG00000006719	-	70	33.582
ENSTGUG00000003316	-	99	82.840	ENSTGUG00000008158	-	100	82.840
ENSTGUG00000003316	-	94	52.778	ENSTGUG00000006393	PCBP4	96	52.778
ENSTGUG00000003316	-	94	30.469	ENSTGUG00000004662	FUBP3	76	30.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003316	-	98	84.084	ENSAPOG00000020003	pcbp3	87	84.084	Acanthochromis_polyacanthus
ENSTGUG00000003316	-	96	87.963	ENSAPOG00000016582	-	98	84.302	Acanthochromis_polyacanthus
ENSTGUG00000003316	-	100	90.560	ENSAMEG00000001697	-	92	90.560	Ailuropoda_melanoleuca
ENSTGUG00000003316	-	99	83.768	ENSACIG00000002739	-	98	83.768	Amphilophus_citrinellus
ENSTGUG00000003316	-	96	79.310	ENSACIG00000010933	pcbp3	97	77.160	Amphilophus_citrinellus
ENSTGUG00000003316	-	95	87.307	ENSAOCG00000008592	-	96	87.307	Amphiprion_ocellaris
ENSTGUG00000003316	-	88	91.246	ENSAOCG00000007806	-	99	91.246	Amphiprion_ocellaris
ENSTGUG00000003316	-	96	81.268	ENSAPEG00000008011	pcbp3	93	81.268	Amphiprion_percula
ENSTGUG00000003316	-	99	85.546	ENSAPEG00000005209	-	98	85.546	Amphiprion_percula
ENSTGUG00000003316	-	99	86.310	ENSATEG00000009833	-	98	86.310	Anabas_testudineus
ENSTGUG00000003316	-	95	80.058	ENSATEG00000015787	-	98	80.058	Anabas_testudineus
ENSTGUG00000003316	-	100	92.353	ENSAPLG00000002975	-	100	92.353	Anas_platyrhynchos
ENSTGUG00000003316	-	97	72.074	ENSAPLG00000008951	-	80	72.074	Anas_platyrhynchos
ENSTGUG00000003316	-	99	77.839	ENSACAG00000009819	-	99	77.839	Anolis_carolinensis
ENSTGUG00000003316	-	100	86.188	ENSACAG00000004607	-	100	86.188	Anolis_carolinensis
ENSTGUG00000003316	-	76	90.698	ENSANAG00000030702	-	100	90.698	Aotus_nancymaae
ENSTGUG00000003316	-	96	80.980	ENSACLG00000011835	pcbp3	93	80.980	Astatotilapia_calliptera
ENSTGUG00000003316	-	99	87.725	ENSACLG00000003801	-	98	87.725	Astatotilapia_calliptera
ENSTGUG00000003316	-	96	82.133	ENSAMXG00000003440	pcbp3	93	82.133	Astyanax_mexicanus
ENSTGUG00000003316	-	97	64.444	ENSAMXG00000001760	zgc:110045	73	64.444	Astyanax_mexicanus
ENSTGUG00000003316	-	95	83.901	ENSAMXG00000013588	-	98	83.901	Astyanax_mexicanus
ENSTGUG00000003316	-	87	93.590	ENSCAFG00020019472	-	83	93.590	Canis_lupus_dingo
ENSTGUG00000003316	-	100	89.381	ENSCSAG00000007440	-	91	89.381	Chlorocebus_sabaeus
ENSTGUG00000003316	-	97	77.208	ENSCPBG00000000733	-	69	88.525	Chrysemys_picta_bellii
ENSTGUG00000003316	-	100	96.460	ENSCPBG00000012151	-	100	96.460	Chrysemys_picta_bellii
ENSTGUG00000003316	-	95	84.520	ENSCSEG00000000822	pcbp3	97	84.520	Cynoglossus_semilaevis
ENSTGUG00000003316	-	99	75.362	ENSCSEG00000016984	-	98	75.362	Cynoglossus_semilaevis
ENSTGUG00000003316	-	99	88.166	ENSCVAG00000005262	-	99	88.166	Cyprinodon_variegatus
ENSTGUG00000003316	-	96	80.980	ENSCVAG00000014482	pcbp3	93	80.980	Cyprinodon_variegatus
ENSTGUG00000003316	-	99	82.825	ENSDARG00000054378	pcbp3	99	82.825	Danio_rerio
ENSTGUG00000003316	-	100	76.696	ENSETEG00000015988	-	100	76.696	Echinops_telfairi
ENSTGUG00000003316	-	88	69.435	ENSEBUG00000016192	pcbp3	100	69.655	Eptatretus_burgeri
ENSTGUG00000003316	-	98	74.260	ENSEBUG00000007485	-	92	78.182	Eptatretus_burgeri
ENSTGUG00000003316	-	92	72.889	ENSEBUG00000005495	pcbp3	67	72.889	Eptatretus_burgeri
ENSTGUG00000003316	-	96	80.793	ENSELUG00000003521	pcbp3	94	80.793	Esox_lucius
ENSTGUG00000003316	-	95	87.926	ENSELUG00000001560	-	97	80.845	Esox_lucius
ENSTGUG00000003316	-	100	90.265	ENSFALG00000003949	-	100	90.265	Ficedula_albicollis
ENSTGUG00000003316	-	97	72.074	ENSFALG00000004411	-	75	72.074	Ficedula_albicollis
ENSTGUG00000003316	-	99	85.423	ENSFHEG00000006539	-	99	85.423	Fundulus_heteroclitus
ENSTGUG00000003316	-	96	85.276	ENSFHEG00000016615	pcbp3	94	85.276	Fundulus_heteroclitus
ENSTGUG00000003316	-	95	69.846	ENSGMOG00000008611	-	98	69.846	Gadus_morhua
ENSTGUG00000003316	-	96	77.134	ENSGMOG00000011992	pcbp3	95	77.134	Gadus_morhua
ENSTGUG00000003316	-	100	87.738	ENSGALG00000004394	-	96	92.778	Gallus_gallus
ENSTGUG00000003316	-	99	76.667	ENSGALG00000013155	-	99	75.921	Gallus_gallus
ENSTGUG00000003316	-	96	87.654	ENSGAFG00000010274	-	93	87.654	Gambusia_affinis
ENSTGUG00000003316	-	97	77.904	ENSGAFG00000011430	pcbp3	95	77.904	Gambusia_affinis
ENSTGUG00000003316	-	99	87.500	ENSGACG00000002266	-	98	87.500	Gasterosteus_aculeatus
ENSTGUG00000003316	-	99	75.910	ENSGACG00000014955	-	98	75.910	Gasterosteus_aculeatus
ENSTGUG00000003316	-	83	85.159	ENSGAGG00000000271	-	98	85.159	Gopherus_agassizii
ENSTGUG00000003316	-	79	90.674	ENSGAGG00000006956	-	78	90.674	Gopherus_agassizii
ENSTGUG00000003316	-	95	83.333	ENSHBUG00000010697	pcbp3	96	83.333	Haplochromis_burtoni
ENSTGUG00000003316	-	99	87.725	ENSHBUG00000021782	-	98	87.725	Haplochromis_burtoni
ENSTGUG00000003316	-	99	83.832	ENSHCOG00000006067	-	98	83.832	Hippocampus_comes
ENSTGUG00000003316	-	96	80.980	ENSHCOG00000017868	pcbp3	93	80.980	Hippocampus_comes
ENSTGUG00000003316	-	99	86.982	ENSIPUG00000006238	pcbp3	99	86.982	Ictalurus_punctatus
ENSTGUG00000003316	-	96	81.268	ENSKMAG00000003046	pcbp3	93	81.268	Kryptolebias_marmoratus
ENSTGUG00000003316	-	96	87.037	ENSKMAG00000018530	-	93	87.037	Kryptolebias_marmoratus
ENSTGUG00000003316	-	99	73.156	ENSLBEG00000006542	-	98	73.156	Labrus_bergylta
ENSTGUG00000003316	-	98	84.592	ENSLBEG00000006201	pcbp3	96	84.592	Labrus_bergylta
ENSTGUG00000003316	-	97	78.133	ENSLACG00000010386	pcbp3	75	78.133	Latimeria_chalumnae
ENSTGUG00000003316	-	97	72.118	ENSLACG00000010804	zgc:110045	74	72.118	Latimeria_chalumnae
ENSTGUG00000003316	-	100	89.676	ENSLOCG00000009369	pcbp3	100	89.676	Lepisosteus_oculatus
ENSTGUG00000003316	-	97	76.353	ENSLOCG00000005058	zgc:110045	81	76.353	Lepisosteus_oculatus
ENSTGUG00000003316	-	99	86.012	ENSMAMG00000011620	-	98	86.012	Mastacembelus_armatus
ENSTGUG00000003316	-	96	84.969	ENSMAMG00000022336	pcbp3	92	84.969	Mastacembelus_armatus
ENSTGUG00000003316	-	99	79.827	ENSMZEG00005014882	-	98	80.403	Maylandia_zebra
ENSTGUG00000003316	-	96	77.966	ENSMZEG00005008993	pcbp3	96	77.841	Maylandia_zebra
ENSTGUG00000003316	-	97	72.340	ENSMGAG00000006794	-	75	72.340	Meleagris_gallopavo
ENSTGUG00000003316	-	97	79.494	ENSMGAG00000001883	-	97	79.775	Meleagris_gallopavo
ENSTGUG00000003316	-	99	85.928	ENSMMOG00000005216	-	98	85.928	Mola_mola
ENSTGUG00000003316	-	95	84.049	ENSMMOG00000000730	pcbp3	86	84.049	Mola_mola
ENSTGUG00000003316	-	73	88.318	ENSMODG00000027884	-	93	88.318	Monodelphis_domestica
ENSTGUG00000003316	-	95	80.000	ENSMALG00000000691	pcbp3	93	80.000	Monopterus_albus
ENSTGUG00000003316	-	100	88.496	ENSMPUG00000001779	-	92	88.496	Mustela_putorius_furo
ENSTGUG00000003316	-	96	79.251	ENSNBRG00000016409	-	93	79.251	Neolamprologus_brichardi
ENSTGUG00000003316	-	99	79.656	ENSNBRG00000016714	-	100	79.656	Neolamprologus_brichardi
ENSTGUG00000003316	-	96	85.511	ENSOPRG00000003431	-	100	85.511	Ochotona_princeps
ENSTGUG00000003316	-	95	82.081	ENSONIG00000012122	-	96	82.081	Oreochromis_niloticus
ENSTGUG00000003316	-	99	87.725	ENSONIG00000004611	-	98	87.725	Oreochromis_niloticus
ENSTGUG00000003316	-	100	89.086	ENSOCUG00000002696	-	91	89.086	Oryctolagus_cuniculus
ENSTGUG00000003316	-	99	88.024	ENSORLG00000022739	-	98	88.024	Oryzias_latipes
ENSTGUG00000003316	-	95	87.307	ENSORLG00000000059	pcbp3	98	87.307	Oryzias_latipes
ENSTGUG00000003316	-	99	87.725	ENSORLG00020006124	-	98	87.725	Oryzias_latipes_hni
ENSTGUG00000003316	-	98	86.145	ENSORLG00020012671	pcbp3	97	86.145	Oryzias_latipes_hni
ENSTGUG00000003316	-	98	86.707	ENSORLG00015008051	-	95	86.707	Oryzias_latipes_hsok
ENSTGUG00000003316	-	98	86.145	ENSORLG00015000429	pcbp3	97	86.145	Oryzias_latipes_hsok
ENSTGUG00000003316	-	87	88.136	ENSOMEG00000020811	pcbp3	94	88.136	Oryzias_melastigma
ENSTGUG00000003316	-	99	87.725	ENSOMEG00000020162	-	98	87.725	Oryzias_melastigma
ENSTGUG00000003316	-	100	83.152	ENSOGAG00000008044	-	100	83.152	Otolemur_garnettii
ENSTGUG00000003316	-	80	80.000	ENSPKIG00000020913	-	84	80.000	Paramormyrops_kingsleyae
ENSTGUG00000003316	-	99	86.866	ENSPKIG00000019329	pcbp3	98	86.866	Paramormyrops_kingsleyae
ENSTGUG00000003316	-	72	77.068	ENSPSIG00000008350	-	68	77.068	Pelodiscus_sinensis
ENSTGUG00000003316	-	100	81.050	ENSPSIG00000014970	-	100	81.633	Pelodiscus_sinensis
ENSTGUG00000003316	-	95	81.159	ENSPMGG00000022383	pcbp3	93	81.159	Periophthalmus_magnuspinnatus
ENSTGUG00000003316	-	84	83.420	ENSPMAG00000004637	-	100	83.420	Petromyzon_marinus
ENSTGUG00000003316	-	98	67.964	ENSPMAG00000004551	pcbp3	91	67.964	Petromyzon_marinus
ENSTGUG00000003316	-	100	84.530	ENSPCIG00000028092	-	99	88.739	Phascolarctos_cinereus
ENSTGUG00000003316	-	97	79.320	ENSPLAG00000011449	pcbp3	87	79.320	Poecilia_latipinna
ENSTGUG00000003316	-	99	87.425	ENSPLAG00000004074	-	91	87.425	Poecilia_latipinna
ENSTGUG00000003316	-	100	83.523	ENSPMEG00000006653	-	100	83.807	Poecilia_mexicana
ENSTGUG00000003316	-	95	81.089	ENSPMEG00000021239	pcbp3	93	81.089	Poecilia_mexicana
ENSTGUG00000003316	-	99	86.826	ENSPREG00000020585	-	98	86.826	Poecilia_reticulata
ENSTGUG00000003316	-	95	84.308	ENSPREG00000015736	pcbp3	97	84.308	Poecilia_reticulata
ENSTGUG00000003316	-	99	86.228	ENSPNYG00000013205	-	98	86.228	Pundamilia_nyererei
ENSTGUG00000003316	-	95	83.636	ENSPNYG00000012326	pcbp3	93	83.636	Pundamilia_nyererei
ENSTGUG00000003316	-	95	84.424	ENSPNAG00000008541	-	96	84.424	Pygocentrus_nattereri
ENSTGUG00000003316	-	99	88.166	ENSPNAG00000015104	pcbp3	99	88.166	Pygocentrus_nattereri
ENSTGUG00000003316	-	100	89.676	ENSRNOG00000001245	Pcbp3	100	89.676	Rattus_norvegicus
ENSTGUG00000003316	-	100	85.100	ENSRBIG00000028177	-	100	80.319	Rhinopithecus_bieti
ENSTGUG00000003316	-	100	95.575	ENSSHAG00000007890	-	100	95.575	Sarcophilus_harrisii
ENSTGUG00000003316	-	99	75.000	ENSSFOG00015007118	-	97	75.000	Scleropages_formosus
ENSTGUG00000003316	-	96	80.692	ENSSFOG00015014706	pcbp3	93	80.692	Scleropages_formosus
ENSTGUG00000003316	-	96	87.963	ENSSFOG00015010205	pcbp3	93	87.963	Scleropages_formosus
ENSTGUG00000003316	-	99	88.024	ENSSMAG00000003135	-	98	88.024	Scophthalmus_maximus
ENSTGUG00000003316	-	95	85.759	ENSSMAG00000011929	pcbp3	95	85.759	Scophthalmus_maximus
ENSTGUG00000003316	-	95	79.769	ENSSDUG00000011608	pcbp3	97	79.769	Seriola_dumerili
ENSTGUG00000003316	-	96	81.763	ENSSDUG00000008502	-	98	77.607	Seriola_dumerili
ENSTGUG00000003316	-	95	79.769	ENSSLDG00000008518	pcbp3	97	79.769	Seriola_lalandi_dorsalis
ENSTGUG00000003316	-	96	87.963	ENSSLDG00000020161	-	93	87.963	Seriola_lalandi_dorsalis
ENSTGUG00000003316	-	97	70.933	ENSSPUG00000013214	-	92	80.288	Sphenodon_punctatus
ENSTGUG00000003316	-	88	91.582	ENSSPAG00000004190	-	99	91.582	Stegastes_partitus
ENSTGUG00000003316	-	96	68.481	ENSSPAG00000023341	-	93	68.481	Stegastes_partitus
ENSTGUG00000003316	-	96	81.050	ENSTRUG00000013604	pcbp3	93	81.050	Takifugu_rubripes
ENSTGUG00000003316	-	88	90.236	ENSTRUG00000006280	-	88	90.236	Takifugu_rubripes
ENSTGUG00000003316	-	100	88.398	ENSTTRG00000015075	-	100	88.398	Tursiops_truncatus
ENSTGUG00000003316	-	91	71.629	ENSXETG00000010491	pcbp2	74	71.629	Xenopus_tropicalis
ENSTGUG00000003316	-	100	89.381	ENSXETG00000011483	pcbp1	100	89.381	Xenopus_tropicalis
ENSTGUG00000003316	-	95	81.089	ENSXCOG00000020481	pcbp3	93	81.089	Xiphophorus_couchianus
ENSTGUG00000003316	-	96	81.268	ENSXMAG00000008175	pcbp3	93	81.268	Xiphophorus_maculatus
ENSTGUG00000003316	-	96	87.963	ENSXMAG00000028711	-	93	87.963	Xiphophorus_maculatus