EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000003513 (Gene tree)
Gene ID: 100190053
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 672 bases
Position: chr18:1751206-1751877
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000003623	RRM_1	PF00076.22	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000003662	ALYREF-201	405	-	ENSTGUP00000003623	135 (aa)	-	H0YZ89

Gene Model

Click here to download ENSTGUG00000003513's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu03013	RNA transport	KEGG
tgu03015	mRNA surveillance pathway	KEGG
tgu03040	Spliceosome	KEGG
tgu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003513	ALYREF	100	91.111	ENSG00000183684	ALYREF	50	93.182	Homo_sapiens
ENSTGUG00000003513	ALYREF	100	70.000	ENSAPOG00000018455	ALYREF	50	78.832	Acanthochromis_polyacanthus
ENSTGUG00000003513	ALYREF	100	88.889	ENSAMEG00000017463	ALYREF	53	90.909	Ailuropoda_melanoleuca
ENSTGUG00000003513	ALYREF	100	87.407	ENSACAG00000010526	ALYREF	52	85.926	Anolis_carolinensis
ENSTGUG00000003513	ALYREF	97	93.893	ENSANAG00000022638	-	56	93.893	Aotus_nancymaae
ENSTGUG00000003513	ALYREF	100	91.111	ENSBTAG00000008498	ALYREF	51	93.182	Bos_taurus
ENSTGUG00000003513	ALYREF	100	91.111	ENSCJAG00000039942	ALYREF	50	93.182	Callithrix_jacchus
ENSTGUG00000003513	ALYREF	100	91.111	ENSCAFG00000005877	ALYREF	51	93.182	Canis_familiaris
ENSTGUG00000003513	ALYREF	100	91.111	ENSCAFG00020009815	ALYREF	51	93.182	Canis_lupus_dingo
ENSTGUG00000003513	ALYREF	98	93.939	ENSCHIG00000017396	ALYREF	52	85.714	Capra_hircus
ENSTGUG00000003513	ALYREF	99	93.233	ENSTSYG00000002272	ALYREF	52	93.233	Carlito_syrichta
ENSTGUG00000003513	ALYREF	99	90.299	ENSCAPG00000014727	-	98	92.366	Cavia_aperea
ENSTGUG00000003513	ALYREF	100	90.370	ENSCPOG00000013710	ALYREF	51	92.424	Cavia_porcellus
ENSTGUG00000003513	ALYREF	100	75.556	ENSCCAG00000030237	-	58	78.519	Cebus_capucinus
ENSTGUG00000003513	ALYREF	100	91.852	ENSCCAG00000020578	-	50	93.939	Cebus_capucinus
ENSTGUG00000003513	ALYREF	99	93.985	ENSCATG00000033169	ALYREF	50	93.939	Cercocebus_atys
ENSTGUG00000003513	ALYREF	100	89.630	ENSCLAG00000015026	ALYREF	56	91.667	Chinchilla_lanigera
ENSTGUG00000003513	ALYREF	100	91.852	ENSCSAG00000002216	ALYREF	50	93.939	Chlorocebus_sabaeus
ENSTGUG00000003513	ALYREF	99	93.985	ENSCANG00000034056	ALYREF	66	86.567	Colobus_angolensis_palliatus
ENSTGUG00000003513	ALYREF	100	89.630	ENSCGRG00001018191	-	56	87.121	Cricetulus_griseus_chok1gshd
ENSTGUG00000003513	ALYREF	100	89.630	ENSCGRG00000015871	-	58	91.667	Cricetulus_griseus_crigri
ENSTGUG00000003513	ALYREF	100	89.630	ENSDNOG00000002563	ALYREF	56	91.667	Dasypus_novemcinctus
ENSTGUG00000003513	ALYREF	100	88.889	ENSDORG00000025849	-	54	90.909	Dipodomys_ordii
ENSTGUG00000003513	ALYREF	100	89.630	ENSETEG00000016596	ALYREF	74	90.152	Echinops_telfairi
ENSTGUG00000003513	ALYREF	100	90.370	ENSFCAG00000022549	ALYREF	50	92.424	Felis_catus
ENSTGUG00000003513	ALYREF	99	91.729	ENSFDAG00000001213	ALYREF	62	91.729	Fukomys_damarensis
ENSTGUG00000003513	ALYREF	100	93.333	ENSGALG00000007237	ALYREF	52	95.455	Gallus_gallus
ENSTGUG00000003513	ALYREF	100	70.073	ENSGACG00000013328	ALYREF	52	72.593	Gasterosteus_aculeatus
ENSTGUG00000003513	ALYREF	100	89.706	ENSGAGG00000008536	ALYREF	52	94.737	Gopherus_agassizii
ENSTGUG00000003513	ALYREF	100	91.852	ENSGGOG00000013935	ALYREF	51	94.656	Gorilla_gorilla
ENSTGUG00000003513	ALYREF	100	88.889	ENSHGLG00000008293	ALYREF	52	90.909	Heterocephalus_glaber_female
ENSTGUG00000003513	ALYREF	100	88.889	ENSHGLG00100006949	ALYREF	56	90.909	Heterocephalus_glaber_male
ENSTGUG00000003513	ALYREF	100	72.857	ENSHCOG00000015046	ALYREF	51	72.593	Hippocampus_comes
ENSTGUG00000003513	ALYREF	100	89.630	ENSJJAG00000004134	-	51	89.394	Jaculus_jaculus
ENSTGUG00000003513	ALYREF	100	73.529	ENSLACG00000005694	ALYREF	52	78.947	Latimeria_chalumnae
ENSTGUG00000003513	ALYREF	100	88.889	ENSLAFG00000003083	ALYREF	70	90.909	Loxodonta_africana
ENSTGUG00000003513	ALYREF	100	91.852	ENSMFAG00000001394	ALYREF	51	93.939	Macaca_fascicularis
ENSTGUG00000003513	ALYREF	98	94.697	ENSMMUG00000012884	ALYREF	50	93.939	Macaca_mulatta
ENSTGUG00000003513	ALYREF	99	93.985	ENSMNEG00000043666	ALYREF	50	93.939	Macaca_nemestrina
ENSTGUG00000003513	ALYREF	100	82.222	ENSMLEG00000043353	ALYREF	61	85.185	Mandrillus_leucophaeus
ENSTGUG00000003513	ALYREF	100	89.630	ENSMAUG00000020552	-	58	89.630	Mesocricetus_auratus
ENSTGUG00000003513	ALYREF	99	93.233	ENSMICG00000017403	ALYREF	50	93.182	Microcebus_murinus
ENSTGUG00000003513	ALYREF	100	89.630	ENSMOCG00000016792	-	51	91.667	Microtus_ochrogaster
ENSTGUG00000003513	ALYREF	100	76.596	ENSMALG00000019408	ALYREF	51	77.941	Monopterus_albus
ENSTGUG00000003513	ALYREF	100	90.370	MGP_CAROLIEiJ_G0017529	Alyref	51	92.424	Mus_caroli
ENSTGUG00000003513	ALYREF	97	75.573	MGP_CAROLIEiJ_G0014874	Alyref2	57	75.573	Mus_caroli
ENSTGUG00000003513	ALYREF	95	70.803	ENSMUSG00000117091	AC153137.1	56	65.926	Mus_musculus
ENSTGUG00000003513	ALYREF	95	71.533	ENSMUSG00000086727	4931428L18Rik	56	67.407	Mus_musculus
ENSTGUG00000003513	ALYREF	100	61.963	ENSMUSG00000097550	Gm21304	59	55.484	Mus_musculus
ENSTGUG00000003513	ALYREF	100	90.370	ENSMUSG00000025134	Alyref	51	92.424	Mus_musculus
ENSTGUG00000003513	ALYREF	100	61.963	ENSMUSG00000097427	Gm6763	59	55.484	Mus_musculus
ENSTGUG00000003513	ALYREF	100	60.479	ENSMUSG00000090854	Gm4340	60	53.459	Mus_musculus
ENSTGUG00000003513	ALYREF	100	61.963	ENSMUSG00000091779	Gm21293	59	55.484	Mus_musculus
ENSTGUG00000003513	ALYREF	97	74.046	ENSMUSG00000060244	Alyref2	56	73.282	Mus_musculus
ENSTGUG00000003513	ALYREF	100	61.963	ENSMUSG00000097878	Gm8764	59	55.484	Mus_musculus
ENSTGUG00000003513	ALYREF	100	61.963	ENSMUSG00000095022	Gm20765	59	55.484	Mus_musculus
ENSTGUG00000003513	ALYREF	100	61.963	ENSMUSG00000094144	Gm21312	59	55.484	Mus_musculus
ENSTGUG00000003513	ALYREF	100	90.370	MGP_PahariEiJ_G0018655	-	51	92.424	Mus_pahari
ENSTGUG00000003513	ALYREF	97	72.519	MGP_SPRETEiJ_G0015679	Alyref2	56	71.756	Mus_spretus
ENSTGUG00000003513	ALYREF	100	90.370	MGP_SPRETEiJ_G0018373	Alyref	51	92.424	Mus_spretus
ENSTGUG00000003513	ALYREF	96	69.697	ENSMLUG00000028343	-	63	68.939	Myotis_lucifugus
ENSTGUG00000003513	ALYREF	96	67.910	ENSMLUG00000002626	-	52	68.657	Myotis_lucifugus
ENSTGUG00000003513	ALYREF	96	63.971	ENSMLUG00000015043	-	57	61.765	Myotis_lucifugus
ENSTGUG00000003513	ALYREF	99	93.985	ENSNLEG00000010313	ALYREF	50	93.939	Nomascus_leucogenys
ENSTGUG00000003513	ALYREF	99	88.806	ENSMEUG00000002210	ALYREF	57	90.840	Notamacropus_eugenii
ENSTGUG00000003513	ALYREF	99	87.313	ENSOPRG00000005551	-	51	89.313	Ochotona_princeps
ENSTGUG00000003513	ALYREF	100	87.681	ENSODEG00000008359	ALYREF	52	89.630	Octodon_degus
ENSTGUG00000003513	ALYREF	98	77.612	ENSORLG00000012331	ALYREF	52	76.119	Oryzias_latipes
ENSTGUG00000003513	ALYREF	100	88.971	ENSOGAG00000012409	ALYREF	56	89.474	Otolemur_garnettii
ENSTGUG00000003513	ALYREF	100	90.370	ENSPPRG00000010829	ALYREF	50	92.424	Panthera_pardus
ENSTGUG00000003513	ALYREF	99	93.985	ENSPTRG00000009774	ALYREF	50	93.939	Pan_troglodytes
ENSTGUG00000003513	ALYREF	99	93.985	ENSPANG00000019265	ALYREF	50	93.939	Papio_anubis
ENSTGUG00000003513	ALYREF	99	96.269	ENSPSIG00000017541	ALYREF	99	96.269	Pelodiscus_sinensis
ENSTGUG00000003513	ALYREF	100	91.852	ENSPPYG00000008749	ALYREF	50	93.939	Pongo_abelii
ENSTGUG00000003513	ALYREF	100	91.111	ENSPCOG00000020874	ALYREF	50	93.182	Propithecus_coquereli
ENSTGUG00000003513	ALYREF	100	88.889	ENSPVAG00000017866	ALYREF	51	89.394	Pteropus_vampyrus
ENSTGUG00000003513	ALYREF	99	93.985	ENSRBIG00000039651	ALYREF	54	93.985	Rhinopithecus_bieti
ENSTGUG00000003513	ALYREF	99	93.985	ENSRROG00000045364	ALYREF	54	94.697	Rhinopithecus_roxellana
ENSTGUG00000003513	ALYREF	100	91.111	ENSSHAG00000010459	ALYREF	68	93.182	Sarcophilus_harrisii
ENSTGUG00000003513	ALYREF	99	56.552	ENSSDUG00000003992	-	54	56.643	Seriola_dumerili
ENSTGUG00000003513	ALYREF	98	57.857	ENSSLDG00000005386	-	53	62.143	Seriola_lalandi_dorsalis
ENSTGUG00000003513	ALYREF	100	91.111	ENSSPUG00000004600	ALYREF	51	93.182	Sphenodon_punctatus
ENSTGUG00000003513	ALYREF	100	76.596	ENSSPAG00000011178	ALYREF	50	76.596	Stegastes_partitus
ENSTGUG00000003513	ALYREF	100	91.111	ENSSSCG00000032655	ALYREF	52	93.182	Sus_scrofa
ENSTGUG00000003513	ALYREF	100	73.913	ENSTRUG00000008828	ALYREF	50	73.333	Takifugu_rubripes
ENSTGUG00000003513	ALYREF	100	88.889	ENSTBEG00000005834	ALYREF	74	90.909	Tupaia_belangeri
ENSTGUG00000003513	ALYREF	100	90.370	ENSTTRG00000012275	ALYREF	52	92.424	Tursiops_truncatus
ENSTGUG00000003513	ALYREF	100	84.559	ENSXETG00000005391	alyref	56	82.576	Xenopus_tropicalis