EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000003680 (Gene tree)
Gene ID: 100231666
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 1411 bases
Position: chr25:252514-253924
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000003794	MMR_HSR1	PF01926.23	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000003836	-	612	-	ENSTGUP00000003794	203 (aa)	-	H0YZR0

Gene Model

Click here to download ENSTGUG00000003680's gene model file

Pathways

Pathway ID	Pathway Name	Source
tgu04144	Endocytosis	KEGG
tgu05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000003680	-	99	43.069	ENSTGUG00000003236	RAB5A	90	43.069
ENSTGUG00000003680	-	79	44.720	ENSTGUG00000009359	RAB35	95	39.000
ENSTGUG00000003680	-	79	52.500	ENSTGUG00000006657	RAB14	74	52.500
ENSTGUG00000003680	-	99	63.682	ENSTGUG00000003675	RAB25	92	63.682
ENSTGUG00000003680	-	77	30.380	ENSTGUG00000004727	MRAS	80	31.548
ENSTGUG00000003680	-	86	38.916	ENSTGUG00000001105	-	84	38.916
ENSTGUG00000003680	-	73	34.667	ENSTGUG00000009877	HRAS	84	35.625
ENSTGUG00000003680	-	99	45.000	ENSTGUG00000002328	RAB1A	94	45.000
ENSTGUG00000003680	-	58	30.579	ENSTGUG00000002488	ARL4A	59	30.579
ENSTGUG00000003680	-	81	51.829	ENSTGUG00000011182	RAB2A	96	47.059
ENSTGUG00000003680	-	78	42.767	ENSTGUG00000008195	RAB22A	82	42.767
ENSTGUG00000003680	-	81	39.080	ENSTGUG00000002436	RAB33B	77	39.080
ENSTGUG00000003680	-	81	41.818	ENSTGUG00000012941	RAB30	80	41.818
ENSTGUG00000003680	-	83	37.572	ENSTGUG00000005228	RAB33A	83	37.572
ENSTGUG00000003680	-	100	82.266	ENSTGUG00000009279	RAB11A	94	82.266
ENSTGUG00000003680	-	74	37.748	ENSTGUG00000013171	-	90	37.748
ENSTGUG00000003680	-	77	32.692	ENSTGUG00000012794	RAB23	70	33.735
ENSTGUG00000003680	-	75	39.744	ENSTGUG00000009776	-	90	39.744
ENSTGUG00000003680	-	77	34.810	ENSTGUG00000016028	-	73	34.810
ENSTGUG00000003680	-	73	33.333	ENSTGUG00000012235	KRAS	85	33.951
ENSTGUG00000003680	-	76	34.839	ENSTGUG00000013470	RAB6A	75	34.839
ENSTGUG00000003680	-	75	34.839	ENSTGUG00000000988	NRAS	86	35.758
ENSTGUG00000003680	-	79	45.679	ENSTGUG00000003786	RAB17	76	45.679
ENSTGUG00000003680	-	78	31.250	ENSTGUG00000007747	-	76	31.250
ENSTGUG00000003680	-	62	30.233	ENSTGUG00000003095	ARL4C	65	30.233
ENSTGUG00000003680	-	81	41.176	ENSTGUG00000006516	RAB9B	84	41.176
ENSTGUG00000003680	-	100	80.488	ENSTGUG00000000084	-	94	80.488
ENSTGUG00000003680	-	67	38.235	ENSTGUG00000008797	RAB20	56	38.235
ENSTGUG00000003680	-	73	39.189	ENSTGUG00000017468	-	70	39.189
ENSTGUG00000003680	-	76	39.375	ENSTGUG00000007832	RAB7A	77	39.375
ENSTGUG00000003680	-	76	36.076	ENSTGUG00000009985	-	66	36.076
ENSTGUG00000003680	-	79	41.358	ENSTGUG00000009889	RAB12	65	41.358

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003680	-	99	83.663	ENSAPOG00000008251	rab11al	95	83.168	Acanthochromis_polyacanthus
ENSTGUG00000003680	-	99	82.178	ENSACIG00000017403	rab11al	94	82.178	Amphilophus_citrinellus
ENSTGUG00000003680	-	99	83.085	ENSAOCG00000015678	rab11al	97	82.587	Amphiprion_ocellaris
ENSTGUG00000003680	-	99	83.085	ENSAPEG00000022135	rab11al	95	83.085	Amphiprion_percula
ENSTGUG00000003680	-	99	82.587	ENSATEG00000006156	rab11al	93	82.587	Anabas_testudineus
ENSTGUG00000003680	-	99	82.673	ENSACLG00000010268	rab11al	96	82.178	Astatotilapia_calliptera
ENSTGUG00000003680	-	99	78.713	ENSAMXG00000024632	rab11al	92	78.713	Astyanax_mexicanus
ENSTGUG00000003680	-	100	92.118	ENSCPBG00000025819	-	99	92.118	Chrysemys_picta_bellii
ENSTGUG00000003680	-	99	82.673	ENSCSEG00000011996	rab11al	93	82.673	Cynoglossus_semilaevis
ENSTGUG00000003680	-	99	83.663	ENSCVAG00000020016	rab11al	94	83.663	Cyprinodon_variegatus
ENSTGUG00000003680	-	99	84.158	ENSDARG00000014340	rab11al	94	84.158	Danio_rerio
ENSTGUG00000003680	-	99	83.168	ENSELUG00000012035	rab11al	94	83.168	Esox_lucius
ENSTGUG00000003680	-	100	93.596	ENSFALG00000002594	-	86	93.596	Ficedula_albicollis
ENSTGUG00000003680	-	94	85.864	ENSFHEG00000000832	rab11al	91	85.864	Fundulus_heteroclitus
ENSTGUG00000003680	-	99	82.090	ENSGMOG00000006450	rab11al	99	82.090	Gadus_morhua
ENSTGUG00000003680	-	99	85.149	ENSGAFG00000021725	rab11al	94	85.149	Gambusia_affinis
ENSTGUG00000003680	-	99	82.178	ENSGACG00000013259	rab11al	94	82.178	Gasterosteus_aculeatus
ENSTGUG00000003680	-	100	93.103	ENSGAGG00000020702	-	94	93.103	Gopherus_agassizii
ENSTGUG00000003680	-	99	82.673	ENSHBUG00000009333	rab11al	94	82.673	Haplochromis_burtoni
ENSTGUG00000003680	-	99	82.673	ENSHCOG00000000232	rab11al	94	82.673	Hippocampus_comes
ENSTGUG00000003680	-	99	83.168	ENSIPUG00000006091	RAB11A	94	83.168	Ictalurus_punctatus
ENSTGUG00000003680	-	99	82.090	ENSKMAG00000015516	rab11al	93	82.090	Kryptolebias_marmoratus
ENSTGUG00000003680	-	99	83.168	ENSLBEG00000016417	rab11al	94	83.168	Labrus_bergylta
ENSTGUG00000003680	-	99	82.673	ENSLACG00000011380	rab11al	93	82.673	Latimeria_chalumnae
ENSTGUG00000003680	-	99	85.075	ENSLOCG00000008865	rab11al	93	85.075	Lepisosteus_oculatus
ENSTGUG00000003680	-	99	82.673	ENSMAMG00000010278	rab11al	94	82.673	Mastacembelus_armatus
ENSTGUG00000003680	-	99	82.673	ENSMZEG00005017514	rab11al	94	82.673	Maylandia_zebra
ENSTGUG00000003680	-	77	98.089	ENSMGAG00000004720	-	93	98.089	Meleagris_gallopavo
ENSTGUG00000003680	-	77	92.357	ENSMMOG00000017117	rab11al	77	92.357	Mola_mola
ENSTGUG00000003680	-	99	81.683	ENSMALG00000004093	rab11al	94	81.683	Monopterus_albus
ENSTGUG00000003680	-	99	82.673	ENSNBRG00000005116	rab11al	95	82.178	Neolamprologus_brichardi
ENSTGUG00000003680	-	99	82.178	ENSONIG00000002281	rab11al	94	82.178	Oreochromis_niloticus
ENSTGUG00000003680	-	99	83.663	ENSORLG00000016126	rab11al	94	83.663	Oryzias_latipes
ENSTGUG00000003680	-	99	83.663	ENSORLG00020013747	rab11al	94	83.663	Oryzias_latipes_hni
ENSTGUG00000003680	-	99	83.663	ENSORLG00015019591	rab11al	94	83.663	Oryzias_latipes_hsok
ENSTGUG00000003680	-	99	83.085	ENSOMEG00000020271	rab11al	93	83.085	Oryzias_melastigma
ENSTGUG00000003680	-	99	82.090	ENSPKIG00000020893	rab11al	93	82.090	Paramormyrops_kingsleyae
ENSTGUG00000003680	-	100	91.626	ENSPSIG00000013143	-	94	91.626	Pelodiscus_sinensis
ENSTGUG00000003680	-	99	82.090	ENSPMGG00000004220	rab11al	80	95.868	Periophthalmus_magnuspinnatus
ENSTGUG00000003680	-	99	84.158	ENSPFOG00000011316	rab11al	94	84.158	Poecilia_formosa
ENSTGUG00000003680	-	99	84.158	ENSPLAG00000007986	rab11al	94	84.158	Poecilia_latipinna
ENSTGUG00000003680	-	99	84.158	ENSPMEG00000000804	rab11al	94	84.158	Poecilia_mexicana
ENSTGUG00000003680	-	99	84.158	ENSPREG00000017324	rab11al	94	84.158	Poecilia_reticulata
ENSTGUG00000003680	-	99	82.673	ENSPNYG00000018244	rab11al	94	82.673	Pundamilia_nyererei
ENSTGUG00000003680	-	99	83.663	ENSPNAG00000029085	rab11al	94	83.663	Pygocentrus_nattereri
ENSTGUG00000003680	-	99	83.085	ENSSFOG00015008618	rab11al	93	83.085	Scleropages_formosus
ENSTGUG00000003680	-	99	82.178	ENSSMAG00000016206	rab11al	94	82.178	Scophthalmus_maximus
ENSTGUG00000003680	-	99	82.178	ENSSDUG00000006278	rab11al	94	82.178	Seriola_dumerili
ENSTGUG00000003680	-	99	82.178	ENSSLDG00000012116	rab11al	94	82.178	Seriola_lalandi_dorsalis
ENSTGUG00000003680	-	100	94.581	ENSSPUG00000002526	-	94	94.581	Sphenodon_punctatus
ENSTGUG00000003680	-	99	82.178	ENSSPAG00000012044	rab11al	94	82.178	Stegastes_partitus
ENSTGUG00000003680	-	99	82.673	ENSTRUG00000007556	rab11al	88	92.593	Takifugu_rubripes
ENSTGUG00000003680	-	99	84.653	ENSXCOG00000004226	rab11al	94	84.653	Xiphophorus_couchianus
ENSTGUG00000003680	-	99	84.653	ENSXMAG00000027071	rab11al	94	84.653	Xiphophorus_maculatus