EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTGUG00000003810 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolar RNA helicase 2-like
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Plus strand
Length: 10641 bases
Position: chr6:1678484-1689124
Accession: 100228351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000003968	GUCT	PF08152.12	1.5e-32	1	1
ENSTGUP00000003968	ResIII	PF04851.15	1.4e-09	1	1
ENSTGUP00000003968	DEAD	PF00270.29	4.4e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004011	-	2415	XM_012574369	ENSTGUP00000003968	679 (aa)	XP_012429823	H0Z082

Gene Model

Click here to download ENSTGUG00000003810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTGUG00000003810	-	50	34.746	ENSTGUG00000002548	DDX4	78	34.670
ENSTGUG00000003810	-	50	30.725	ENSTGUG00000004456	DDX59	53	30.725
ENSTGUG00000003810	-	55	33.161	ENSTGUG00000011611	DDX18	69	33.161
ENSTGUG00000003810	-	51	32.493	ENSTGUG00000009385	DDX47	74	32.295
ENSTGUG00000003810	-	57	31.961	ENSTGUG00000006442	-	57	32.292
ENSTGUG00000003810	-	52	33.889	ENSTGUG00000004622	DDX5	56	33.889
ENSTGUG00000003810	-	62	33.099	ENSTGUG00000005649	DDX27	52	32.471
ENSTGUG00000003810	-	52	33.978	ENSTGUG00000010391	DDX17	55	33.512
ENSTGUG00000003810	-	57	32.398	ENSTGUG00000010452	EIF4A2	92	32.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003810	-	88	74.068	ENSG00000165732	DDX21	75	79.737	Homo_sapiens
ENSTGUG00000003810	-	86	74.593	ENSAMEG00000017978	DDX21	63	80.675	Ailuropoda_melanoleuca
ENSTGUG00000003810	-	80	77.049	ENSACIG00000006429	ddx21	72	77.840	Amphilophus_citrinellus
ENSTGUG00000003810	-	87	72.231	ENSAOCG00000023174	ddx21	71	77.281	Amphiprion_ocellaris
ENSTGUG00000003810	-	87	72.231	ENSAPEG00000007108	ddx21	71	77.281	Amphiprion_percula
ENSTGUG00000003810	-	81	75.906	ENSATEG00000022194	ddx21	71	77.095	Anabas_testudineus
ENSTGUG00000003810	-	90	84.591	ENSAPLG00000013022	-	90	84.345	Anas_platyrhynchos
ENSTGUG00000003810	-	88	78.512	ENSACAG00000009829	DDX21	68	81.701	Anolis_carolinensis
ENSTGUG00000003810	-	90	72.524	ENSANAG00000038109	DDX21	92	82.965	Aotus_nancymaae
ENSTGUG00000003810	-	81	76.354	ENSACLG00000008248	ddx21	67	77.654	Astatotilapia_calliptera
ENSTGUG00000003810	-	80	77.574	ENSAMXG00000009140	ddx21	75	76.536	Astyanax_mexicanus
ENSTGUG00000003810	-	89	72.742	ENSBTAG00000014558	DDX21	69	78.358	Bos_taurus
ENSTGUG00000003810	-	90	72.727	ENSCJAG00000012876	DDX21	68	79.737	Callithrix_jacchus
ENSTGUG00000003810	-	86	75.914	ENSCAFG00000013791	DDX21	68	80.524	Canis_familiaris
ENSTGUG00000003810	-	50	83.186	ENSCAFG00020025973	-	92	83.881	Canis_lupus_dingo
ENSTGUG00000003810	-	89	72.552	ENSCHIG00000000248	-	71	78.358	Capra_hircus
ENSTGUG00000003810	-	89	56.393	ENSCHIG00000014104	-	64	59.475	Capra_hircus
ENSTGUG00000003810	-	92	52.516	ENSCHIG00000006053	-	65	57.223	Capra_hircus
ENSTGUG00000003810	-	89	72.873	ENSTSYG00000011231	DDX21	68	78.731	Carlito_syrichta
ENSTGUG00000003810	-	90	54.400	ENSCAPG00000005945	DDX21	60	66.004	Cavia_aperea
ENSTGUG00000003810	-	90	72.160	ENSCPOG00000015479	DDX21	69	79.174	Cavia_porcellus
ENSTGUG00000003810	-	90	72.524	ENSCCAG00000026288	DDX21	94	80.299	Cebus_capucinus
ENSTGUG00000003810	-	88	74.068	ENSCATG00000043540	DDX21	68	79.550	Cercocebus_atys
ENSTGUG00000003810	-	89	57.475	ENSCATG00000045019	-	76	58.988	Cercocebus_atys
ENSTGUG00000003810	-	89	72.684	ENSCLAG00000012235	DDX21	69	79.737	Chinchilla_lanigera
ENSTGUG00000003810	-	95	63.804	ENSCHOG00000000234	DDX21	76	67.912	Choloepus_hoffmanni
ENSTGUG00000003810	-	98	78.326	ENSCPBG00000019934	-	77	87.061	Chrysemys_picta_bellii
ENSTGUG00000003810	-	92	76.911	ENSCPBG00000019937	-	71	79.522	Chrysemys_picta_bellii
ENSTGUG00000003810	-	89	55.887	ENSCANG00000036110	-	68	58.537	Colobus_angolensis_palliatus
ENSTGUG00000003810	-	88	74.230	ENSCANG00000039926	DDX21	68	79.737	Colobus_angolensis_palliatus
ENSTGUG00000003810	-	86	74.411	ENSCGRG00001016264	-	69	79.362	Cricetulus_griseus_chok1gshd
ENSTGUG00000003810	-	90	64.136	ENSCGRG00001017824	-	69	69.850	Cricetulus_griseus_chok1gshd
ENSTGUG00000003810	-	86	74.411	ENSCGRG00000015134	-	69	79.362	Cricetulus_griseus_crigri
ENSTGUG00000003810	-	90	64.297	ENSCGRG00000008450	-	69	70.037	Cricetulus_griseus_crigri
ENSTGUG00000003810	-	89	70.462	ENSCSEG00000013939	ddx21	70	76.580	Cynoglossus_semilaevis
ENSTGUG00000003810	-	87	73.597	ENSCVAG00000018333	ddx21	71	78.253	Cyprinodon_variegatus
ENSTGUG00000003810	-	90	70.853	ENSDARG00000063626	ddx21	68	76.852	Danio_rerio
ENSTGUG00000003810	-	89	72.512	ENSDNOG00000001680	DDX21	80	72.303	Dasypus_novemcinctus
ENSTGUG00000003810	-	89	68.013	ENSDORG00000002202	Ddx21	67	72.420	Dipodomys_ordii
ENSTGUG00000003810	-	86	73.071	ENSETEG00000014073	DDX21	67	78.987	Echinops_telfairi
ENSTGUG00000003810	-	89	73.355	ENSECAG00000010810	DDX21	68	79.737	Equus_caballus
ENSTGUG00000003810	-	85	69.618	ENSEEUG00000005959	DDX21	74	74.854	Erinaceus_europaeus
ENSTGUG00000003810	-	80	74.033	ENSELUG00000018856	ddx21	70	74.259	Esox_lucius
ENSTGUG00000003810	-	86	76.206	ENSFCAG00000002109	DDX21	68	80.675	Felis_catus
ENSTGUG00000003810	-	95	66.975	ENSFALG00000013043	-	82	71.858	Ficedula_albicollis
ENSTGUG00000003810	-	98	94.737	ENSFALG00000013022	-	98	94.737	Ficedula_albicollis
ENSTGUG00000003810	-	90	72.408	ENSFDAG00000007401	DDX21	69	79.550	Fukomys_damarensis
ENSTGUG00000003810	-	79	78.479	ENSFHEG00000019089	ddx21	71	78.723	Fundulus_heteroclitus
ENSTGUG00000003810	-	79	69.259	ENSGMOG00000012354	ddx21	91	66.786	Gadus_morhua
ENSTGUG00000003810	-	98	66.370	ENSGALG00000042254	-	80	76.208	Gallus_gallus
ENSTGUG00000003810	-	99	84.077	ENSGALG00000004144	-	96	82.805	Gallus_gallus
ENSTGUG00000003810	-	88	72.941	ENSGAFG00000003427	ddx21	72	78.399	Gambusia_affinis
ENSTGUG00000003810	-	79	75.836	ENSGACG00000016060	ddx21	81	75.836	Gasterosteus_aculeatus
ENSTGUG00000003810	-	87	76.756	ENSGAGG00000022169	-	82	76.792	Gopherus_agassizii
ENSTGUG00000003810	-	98	77.661	ENSGAGG00000022163	-	72	86.506	Gopherus_agassizii
ENSTGUG00000003810	-	88	74.068	ENSGGOG00000005065	DDX21	68	79.737	Gorilla_gorilla
ENSTGUG00000003810	-	81	76.354	ENSHBUG00000017638	ddx21	67	77.654	Haplochromis_burtoni
ENSTGUG00000003810	-	89	73.642	ENSHGLG00000013902	DDX21	69	80.300	Heterocephalus_glaber_female
ENSTGUG00000003810	-	89	73.642	ENSHGLG00100015956	DDX21	70	80.300	Heterocephalus_glaber_male
ENSTGUG00000003810	-	80	74.630	ENSHCOG00000014503	ddx21	73	74.860	Hippocampus_comes
ENSTGUG00000003810	-	83	74.735	ENSIPUG00000006972	ddx21	71	76.296	Ictalurus_punctatus
ENSTGUG00000003810	-	93	71.894	ENSSTOG00000011572	DDX21	68	80.675	Ictidomys_tridecemlineatus
ENSTGUG00000003810	-	82	75.571	ENSJJAG00000014035	Ddx21	67	78.987	Jaculus_jaculus
ENSTGUG00000003810	-	81	74.595	ENSKMAG00000020766	ddx21	71	76.022	Kryptolebias_marmoratus
ENSTGUG00000003810	-	90	70.588	ENSLBEG00000001244	ddx21	71	76.580	Labrus_bergylta
ENSTGUG00000003810	-	87	75.850	ENSLACG00000000658	DDX21	99	76.361	Latimeria_chalumnae
ENSTGUG00000003810	-	80	76.340	ENSLOCG00000009123	ddx21	69	76.438	Lepisosteus_oculatus
ENSTGUG00000003810	-	90	71.632	ENSLAFG00000007962	DDX21	68	78.987	Loxodonta_africana
ENSTGUG00000003810	-	88	73.582	ENSMFAG00000044838	DDX21	92	81.293	Macaca_fascicularis
ENSTGUG00000003810	-	89	57.616	ENSMFAG00000033536	-	76	59.130	Macaca_fascicularis
ENSTGUG00000003810	-	88	74.230	ENSMMUG00000001005	DDX21	68	79.737	Macaca_mulatta
ENSTGUG00000003810	-	89	60.616	ENSMMUG00000032331	-	68	65.333	Macaca_mulatta
ENSTGUG00000003810	-	88	74.230	ENSMNEG00000032825	DDX21	68	79.737	Macaca_nemestrina
ENSTGUG00000003810	-	88	70.665	ENSMLEG00000028940	DDX21	89	82.581	Mandrillus_leucophaeus
ENSTGUG00000003810	-	89	57.807	ENSMLEG00000028215	-	76	59.337	Mandrillus_leucophaeus
ENSTGUG00000003810	-	89	70.340	ENSMAMG00000019683	ddx21	74	74.813	Mastacembelus_armatus
ENSTGUG00000003810	-	81	76.354	ENSMZEG00005011618	ddx21	71	77.654	Maylandia_zebra
ENSTGUG00000003810	-	97	84.524	ENSMGAG00000004298	DDX21	99	83.929	Meleagris_gallopavo
ENSTGUG00000003810	-	86	74.415	ENSMAUG00000011153	Ddx21	70	79.291	Mesocricetus_auratus
ENSTGUG00000003810	-	95	71.061	ENSMICG00000015112	-	68	80.300	Microcebus_murinus
ENSTGUG00000003810	-	95	65.084	ENSMICG00000033371	-	86	71.077	Microcebus_murinus
ENSTGUG00000003810	-	89	74.152	ENSMOCG00000020855	Ddx21	69	80.300	Microtus_ochrogaster
ENSTGUG00000003810	-	71	75.934	ENSMMOG00000015938	ddx21	91	75.934	Mola_mola
ENSTGUG00000003810	-	80	75.824	ENSMODG00000010727	DDX21	73	76.623	Monodelphis_domestica
ENSTGUG00000003810	-	84	68.367	ENSMALG00000010489	ddx21	78	74.464	Monopterus_albus
ENSTGUG00000003810	-	86	75.585	MGP_CAROLIEiJ_G0015388	Ddx21	69	79.925	Mus_caroli
ENSTGUG00000003810	-	86	75.753	ENSMUSG00000020075	Ddx21	63	79.925	Mus_musculus
ENSTGUG00000003810	-	86	75.753	MGP_SPRETEiJ_G0016199	Ddx21	63	79.925	Mus_spretus
ENSTGUG00000003810	-	89	73.576	ENSMPUG00000004603	DDX21	67	80.675	Mustela_putorius_furo
ENSTGUG00000003810	-	89	72.320	ENSMLUG00000023298	DDX21	66	77.881	Myotis_lucifugus
ENSTGUG00000003810	-	90	71.136	ENSNGAG00000022273	Ddx21	68	78.918	Nannospalax_galili
ENSTGUG00000003810	-	81	76.354	ENSNBRG00000006198	ddx21	71	77.654	Neolamprologus_brichardi
ENSTGUG00000003810	-	88	73.906	ENSNLEG00000011591	DDX21	75	79.550	Nomascus_leucogenys
ENSTGUG00000003810	-	52	65.535	ENSMEUG00000010586	-	61	64.785	Notamacropus_eugenii
ENSTGUG00000003810	-	76	75.290	ENSOPRG00000001640	DDX21	67	75.734	Ochotona_princeps
ENSTGUG00000003810	-	84	60.915	ENSODEG00000012879	-	70	63.039	Octodon_degus
ENSTGUG00000003810	-	81	76.715	ENSONIG00000005499	ddx21	67	78.026	Oreochromis_niloticus
ENSTGUG00000003810	-	99	67.784	ENSOANG00000004777	DDX21	77	73.109	Ornithorhynchus_anatinus
ENSTGUG00000003810	-	86	75.537	ENSOCUG00000002888	DDX21	63	80.524	Oryctolagus_cuniculus
ENSTGUG00000003810	-	87	71.287	ENSORLG00000010122	ddx21	83	76.536	Oryzias_latipes
ENSTGUG00000003810	-	81	75.091	ENSORLG00020004409	ddx21	82	76.350	Oryzias_latipes_hni
ENSTGUG00000003810	-	80	75.875	ENSORLG00015000051	ddx21	83	76.536	Oryzias_latipes_hsok
ENSTGUG00000003810	-	91	69.401	ENSOMEG00000004523	ddx21	83	66.771	Oryzias_melastigma
ENSTGUG00000003810	-	85	75.214	ENSOGAG00000001846	-	63	79.507	Otolemur_garnettii
ENSTGUG00000003810	-	83	69.788	ENSOGAG00000031242	-	86	71.992	Otolemur_garnettii
ENSTGUG00000003810	-	89	72.364	ENSOARG00000005307	DDX21	68	78.545	Ovis_aries
ENSTGUG00000003810	-	88	74.068	ENSPPAG00000036670	DDX21	68	79.737	Pan_paniscus
ENSTGUG00000003810	-	86	76.040	ENSPPRG00000012523	DDX21	68	80.675	Panthera_pardus
ENSTGUG00000003810	-	86	76.040	ENSPTIG00000007268	DDX21	68	80.675	Panthera_tigris_altaica
ENSTGUG00000003810	-	88	74.068	ENSPTRG00000002563	DDX21	68	79.737	Pan_troglodytes
ENSTGUG00000003810	-	88	74.230	ENSPANG00000022140	DDX21	68	79.737	Papio_anubis
ENSTGUG00000003810	-	96	55.030	ENSPANG00000031334	-	76	58.988	Papio_anubis
ENSTGUG00000003810	-	97	64.095	ENSPKIG00000014660	ddx21	72	77.138	Paramormyrops_kingsleyae
ENSTGUG00000003810	-	99	73.021	ENSPSIG00000004724	DDX21	86	77.816	Pelodiscus_sinensis
ENSTGUG00000003810	-	50	78.635	ENSPMGG00000000721	ddx21	96	78.635	Periophthalmus_magnuspinnatus
ENSTGUG00000003810	-	93	68.049	ENSPEMG00000018513	Ddx21	68	79.362	Peromyscus_maniculatus_bairdii
ENSTGUG00000003810	-	86	77.513	ENSPCIG00000015505	DDX21	80	77.645	Phascolarctos_cinereus
ENSTGUG00000003810	-	78	77.883	ENSPLAG00000017849	ddx21	76	77.883	Poecilia_latipinna
ENSTGUG00000003810	-	88	74.230	ENSPPYG00000002389	DDX21	68	79.925	Pongo_abelii
ENSTGUG00000003810	-	79	74.768	ENSPCAG00000016697	DDX21	74	77.713	Procavia_capensis
ENSTGUG00000003810	-	95	68.477	ENSPCOG00000019284	DDX21	67	76.735	Propithecus_coquereli
ENSTGUG00000003810	-	89	73.794	ENSPVAG00000009521	DDX21	68	80.300	Pteropus_vampyrus
ENSTGUG00000003810	-	77	77.567	ENSPNYG00000015566	ddx21	83	78.405	Pundamilia_nyererei
ENSTGUG00000003810	-	86	71.282	ENSPNAG00000004814	ddx21	74	76.628	Pygocentrus_nattereri
ENSTGUG00000003810	-	89	73.194	ENSRNOG00000043099	Ddx21	68	79.925	Rattus_norvegicus
ENSTGUG00000003810	-	89	72.713	ENSRNOG00000048990	AABR07037356.1	68	79.362	Rattus_norvegicus
ENSTGUG00000003810	-	88	74.230	ENSRBIG00000043721	-	90	80.043	Rhinopithecus_bieti
ENSTGUG00000003810	-	86	70.897	ENSRBIG00000035862	-	71	74.109	Rhinopithecus_bieti
ENSTGUG00000003810	-	88	74.715	ENSRROG00000033387	DDX21	68	79.550	Rhinopithecus_roxellana
ENSTGUG00000003810	-	91	55.340	ENSSBOG00000025801	-	70	59.510	Saimiri_boliviensis_boliviensis
ENSTGUG00000003810	-	87	73.122	ENSSFOG00015014610	ddx21	84	76.580	Scleropages_formosus
ENSTGUG00000003810	-	79	75.696	ENSSMAG00000003932	ddx21	71	75.791	Scophthalmus_maximus
ENSTGUG00000003810	-	82	74.910	ENSSDUG00000021420	ddx21	71	75.978	Seriola_dumerili
ENSTGUG00000003810	-	82	73.561	ENSSLDG00000025665	ddx21	84	75.419	Seriola_lalandi_dorsalis
ENSTGUG00000003810	-	87	78.188	ENSSPUG00000004088	DDX21	82	79.082	Sphenodon_punctatus
ENSTGUG00000003810	-	80	76.937	ENSSPAG00000013142	ddx21	71	77.467	Stegastes_partitus
ENSTGUG00000003810	-	89	74.277	ENSSSCG00000010247	DDX21	68	79.925	Sus_scrofa
ENSTGUG00000003810	-	79	77.009	ENSTRUG00000017570	ddx21	74	77.009	Takifugu_rubripes
ENSTGUG00000003810	-	86	74.359	ENSTNIG00000013798	ddx21	88	77.196	Tetraodon_nigroviridis
ENSTGUG00000003810	-	89	66.176	ENSTBEG00000002310	DDX21	69	70.356	Tupaia_belangeri
ENSTGUG00000003810	-	89	72.990	ENSTTRG00000016398	DDX21	68	79.104	Tursiops_truncatus
ENSTGUG00000003810	-	89	73.734	ENSUMAG00000007735	DDX21	67	80.863	Ursus_maritimus
ENSTGUG00000003810	-	76	79.151	ENSVPAG00000000627	DDX21	73	80.885	Vicugna_pacos
ENSTGUG00000003810	-	89	73.259	ENSVVUG00000020486	DDX21	67	80.675	Vulpes_vulpes
ENSTGUG00000003810	-	78	77.127	ENSXCOG00000009654	ddx21	74	77.127	Xiphophorus_couchianus
ENSTGUG00000003810	-	88	72.437	ENSXMAG00000008199	ddx21	75	75.094	Xiphophorus_maculatus