EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTGUG00000003878 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Taeniopygia_guttata
Status: putative
Strand: Minus strand
Length: 114776 bases
Position: chr3:17409470-17524245
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTGUP00000004007	S1	PF00575.23	9.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTGUT00000004051	SRBD1-201	2487	-	ENSTGUP00000004007	828 (aa)	-	H0Z0C0

Gene Model

Click here to download ENSTGUG00000003878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTGUG00000003878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTGUG00000003878	SRBD1	100	76.627	ENSG00000068784	SRBD1	83	76.627	Homo_sapiens
ENSTGUG00000003878	SRBD1	100	57.143	ENSAPOG00000005103	si:ch211-117n7.8	83	57.497	Acanthochromis_polyacanthus
ENSTGUG00000003878	SRBD1	100	77.831	ENSAMEG00000005993	SRBD1	84	77.831	Ailuropoda_melanoleuca
ENSTGUG00000003878	SRBD1	99	57.313	ENSACIG00000009875	si:ch211-117n7.8	85	57.547	Amphilophus_citrinellus
ENSTGUG00000003878	SRBD1	100	57.429	ENSAOCG00000024718	si:ch211-117n7.8	84	57.547	Amphiprion_ocellaris
ENSTGUG00000003878	SRBD1	100	57.665	ENSAPEG00000002645	si:ch211-117n7.8	87	57.665	Amphiprion_percula
ENSTGUG00000003878	SRBD1	99	58.670	ENSATEG00000010844	si:ch211-117n7.8	83	58.670	Anabas_testudineus
ENSTGUG00000003878	SRBD1	100	90.419	ENSAPLG00000006313	SRBD1	84	90.419	Anas_platyrhynchos
ENSTGUG00000003878	SRBD1	100	77.108	ENSANAG00000025573	SRBD1	84	77.108	Aotus_nancymaae
ENSTGUG00000003878	SRBD1	100	58.824	ENSACLG00000024219	si:ch211-117n7.8	82	58.893	Astatotilapia_calliptera
ENSTGUG00000003878	SRBD1	100	62.217	ENSAMXG00000004294	SRBD1	83	62.307	Astyanax_mexicanus
ENSTGUG00000003878	SRBD1	100	77.284	ENSBTAG00000007508	SRBD1	82	80.945	Bos_taurus
ENSTGUG00000003878	SRBD1	100	76.988	ENSCJAG00000000727	SRBD1	84	76.988	Callithrix_jacchus
ENSTGUG00000003878	SRBD1	100	77.524	ENSCAFG00000002554	SRBD1	84	77.524	Canis_familiaris
ENSTGUG00000003878	SRBD1	100	76.747	ENSCAFG00020026284	SRBD1	97	76.747	Canis_lupus_dingo
ENSTGUG00000003878	SRBD1	100	77.349	ENSCHIG00000016535	SRBD1	82	77.349	Capra_hircus
ENSTGUG00000003878	SRBD1	100	78.391	ENSTSYG00000012797	SRBD1	84	78.391	Carlito_syrichta
ENSTGUG00000003878	SRBD1	100	77.590	ENSCPOG00000004773	SRBD1	84	77.590	Cavia_porcellus
ENSTGUG00000003878	SRBD1	100	77.590	ENSCCAG00000025589	SRBD1	84	77.590	Cebus_capucinus
ENSTGUG00000003878	SRBD1	100	77.470	ENSCATG00000039530	SRBD1	84	77.470	Cercocebus_atys
ENSTGUG00000003878	SRBD1	100	78.046	ENSCLAG00000008623	SRBD1	84	78.046	Chinchilla_lanigera
ENSTGUG00000003878	SRBD1	100	77.349	ENSCSAG00000013350	SRBD1	84	77.349	Chlorocebus_sabaeus
ENSTGUG00000003878	SRBD1	91	64.694	ENSCHOG00000003805	SRBD1	76	64.694	Choloepus_hoffmanni
ENSTGUG00000003878	SRBD1	100	84.578	ENSCPBG00000005677	SRBD1	84	84.578	Chrysemys_picta_bellii
ENSTGUG00000003878	SRBD1	95	44.291	ENSCING00000005950	-	99	44.291	Ciona_intestinalis
ENSTGUG00000003878	SRBD1	95	43.703	ENSCSAVG00000000861	-	99	43.703	Ciona_savignyi
ENSTGUG00000003878	SRBD1	100	77.108	ENSCANG00000016307	SRBD1	84	77.108	Colobus_angolensis_palliatus
ENSTGUG00000003878	SRBD1	100	77.858	ENSCGRG00001000513	Srbd1	84	77.858	Cricetulus_griseus_chok1gshd
ENSTGUG00000003878	SRBD1	100	77.858	ENSCGRG00000002283	Srbd1	84	77.858	Cricetulus_griseus_crigri
ENSTGUG00000003878	SRBD1	100	57.227	ENSCSEG00000000856	si:ch211-117n7.8	84	57.462	Cynoglossus_semilaevis
ENSTGUG00000003878	SRBD1	100	57.963	ENSCVAG00000020212	si:ch211-117n7.8	89	57.963	Cyprinodon_variegatus
ENSTGUG00000003878	SRBD1	100	76.859	ENSDNOG00000018686	SRBD1	83	76.859	Dasypus_novemcinctus
ENSTGUG00000003878	SRBD1	99	76.727	ENSDORG00000010468	Srbd1	83	76.727	Dipodomys_ordii
ENSTGUG00000003878	SRBD1	95	36.183	FBgn0051156	CG31156	79	36.307	Drosophila_melanogaster
ENSTGUG00000003878	SRBD1	90	71.708	ENSETEG00000000739	SRBD1	77	72.242	Echinops_telfairi
ENSTGUG00000003878	SRBD1	87	49.660	ENSEBUG00000008902	si:ch211-117n7.8	96	49.660	Eptatretus_burgeri
ENSTGUG00000003878	SRBD1	100	74.970	ENSEASG00005003132	SRBD1	94	79.463	Equus_asinus_asinus
ENSTGUG00000003878	SRBD1	100	77.497	ENSECAG00000013865	SRBD1	82	77.497	Equus_caballus
ENSTGUG00000003878	SRBD1	99	61.364	ENSELUG00000012592	si:ch211-117n7.8	80	61.364	Esox_lucius
ENSTGUG00000003878	SRBD1	100	77.497	ENSFCAG00000005101	SRBD1	83	77.497	Felis_catus
ENSTGUG00000003878	SRBD1	100	93.301	ENSFALG00000012966	SRBD1	85	93.301	Ficedula_albicollis
ENSTGUG00000003878	SRBD1	100	77.470	ENSFDAG00000016670	SRBD1	85	77.470	Fukomys_damarensis
ENSTGUG00000003878	SRBD1	100	58.137	ENSFHEG00000019480	si:ch211-117n7.8	82	58.137	Fundulus_heteroclitus
ENSTGUG00000003878	SRBD1	61	53.378	ENSGMOG00000018010	-	100	53.378	Gadus_morhua
ENSTGUG00000003878	SRBD1	100	89.626	ENSGALG00000009990	SRBD1	84	89.626	Gallus_gallus
ENSTGUG00000003878	SRBD1	100	58.373	ENSGAFG00000019664	si:ch211-117n7.8	84	58.373	Gambusia_affinis
ENSTGUG00000003878	SRBD1	75	60.252	ENSGACG00000010794	si:ch211-117n7.8	100	60.697	Gasterosteus_aculeatus
ENSTGUG00000003878	SRBD1	100	84.337	ENSGAGG00000006166	SRBD1	99	84.337	Gopherus_agassizii
ENSTGUG00000003878	SRBD1	100	77.108	ENSGGOG00000005910	SRBD1	86	77.108	Gorilla_gorilla
ENSTGUG00000003878	SRBD1	100	51.322	ENSHBUG00000013207	si:ch211-117n7.8	85	51.384	Haplochromis_burtoni
ENSTGUG00000003878	SRBD1	100	77.349	ENSHGLG00000018153	-	84	77.349	Heterocephalus_glaber_female
ENSTGUG00000003878	SRBD1	100	77.349	ENSHGLG00100015183	-	84	77.349	Heterocephalus_glaber_male
ENSTGUG00000003878	SRBD1	100	61.722	ENSIPUG00000009661	srbd1	84	61.722	Ictalurus_punctatus
ENSTGUG00000003878	SRBD1	100	78.675	ENSSTOG00000005898	SRBD1	84	78.675	Ictidomys_tridecemlineatus
ENSTGUG00000003878	SRBD1	100	73.678	ENSJJAG00000022244	Srbd1	83	73.678	Jaculus_jaculus
ENSTGUG00000003878	SRBD1	100	57.427	ENSKMAG00000003473	si:ch211-117n7.8	83	57.427	Kryptolebias_marmoratus
ENSTGUG00000003878	SRBD1	100	57.075	ENSLBEG00000027518	si:ch211-117n7.8	82	57.075	Labrus_bergylta
ENSTGUG00000003878	SRBD1	100	72.684	ENSLACG00000009790	SRBD1	98	72.684	Latimeria_chalumnae
ENSTGUG00000003878	SRBD1	100	65.793	ENSLOCG00000016360	si:ch211-117n7.8	84	65.793	Lepisosteus_oculatus
ENSTGUG00000003878	SRBD1	100	77.349	ENSMFAG00000042026	SRBD1	84	77.349	Macaca_fascicularis
ENSTGUG00000003878	SRBD1	100	77.349	ENSMMUG00000003490	SRBD1	84	77.349	Macaca_mulatta
ENSTGUG00000003878	SRBD1	100	74.337	ENSMNEG00000034701	SRBD1	83	74.337	Macaca_nemestrina
ENSTGUG00000003878	SRBD1	100	77.349	ENSMLEG00000000745	SRBD1	84	77.349	Mandrillus_leucophaeus
ENSTGUG00000003878	SRBD1	96	58.416	ENSMAMG00000021921	si:ch211-117n7.8	83	57.838	Mastacembelus_armatus
ENSTGUG00000003878	SRBD1	100	58.824	ENSMZEG00005027369	si:ch211-117n7.8	82	58.893	Maylandia_zebra
ENSTGUG00000003878	SRBD1	96	85.139	ENSMGAG00000010273	SRBD1	99	85.139	Meleagris_gallopavo
ENSTGUG00000003878	SRBD1	93	75.716	ENSMAUG00000013916	Srbd1	99	73.389	Mesocricetus_auratus
ENSTGUG00000003878	SRBD1	100	77.952	ENSMICG00000007835	SRBD1	83	77.952	Microcebus_murinus
ENSTGUG00000003878	SRBD1	100	76.145	ENSMOCG00000018716	Srbd1	84	76.145	Microtus_ochrogaster
ENSTGUG00000003878	SRBD1	100	57.647	ENSMMOG00000007507	si:ch211-117n7.8	87	57.647	Mola_mola
ENSTGUG00000003878	SRBD1	98	58.204	ENSMALG00000001562	si:ch211-117n7.8	82	58.482	Monopterus_albus
ENSTGUG00000003878	SRBD1	100	75.904	MGP_CAROLIEiJ_G0021934	Srbd1	99	75.000	Mus_caroli
ENSTGUG00000003878	SRBD1	100	76.145	ENSMUSG00000024135	Srbd1	98	76.289	Mus_musculus
ENSTGUG00000003878	SRBD1	100	75.181	MGP_PahariEiJ_G0020924	Srbd1	84	75.181	Mus_pahari
ENSTGUG00000003878	SRBD1	100	75.904	MGP_SPRETEiJ_G0022850	Srbd1	84	75.904	Mus_spretus
ENSTGUG00000003878	SRBD1	100	75.812	ENSMLUG00000007039	SRBD1	84	75.812	Myotis_lucifugus
ENSTGUG00000003878	SRBD1	100	74.476	ENSNGAG00000011893	Srbd1	84	74.476	Nannospalax_galili
ENSTGUG00000003878	SRBD1	100	57.569	ENSNBRG00000012873	si:ch211-117n7.8	85	57.637	Neolamprologus_brichardi
ENSTGUG00000003878	SRBD1	100	77.349	ENSNLEG00000016877	SRBD1	83	77.349	Nomascus_leucogenys
ENSTGUG00000003878	SRBD1	100	76.719	ENSODEG00000012095	SRBD1	85	76.719	Octodon_degus
ENSTGUG00000003878	SRBD1	100	59.569	ENSONIG00000000945	si:ch211-117n7.8	99	59.641	Oreochromis_niloticus
ENSTGUG00000003878	SRBD1	100	78.219	ENSOCUG00000015385	SRBD1	84	78.219	Oryctolagus_cuniculus
ENSTGUG00000003878	SRBD1	99	54.923	ENSORLG00000004427	si:ch211-117n7.8	81	54.923	Oryzias_latipes
ENSTGUG00000003878	SRBD1	99	57.464	ENSORLG00020012792	si:ch211-117n7.8	81	57.701	Oryzias_latipes_hni
ENSTGUG00000003878	SRBD1	99	57.701	ENSORLG00015018598	si:ch211-117n7.8	81	57.547	Oryzias_latipes_hsok
ENSTGUG00000003878	SRBD1	99	56.989	ENSOMEG00000012229	si:ch211-117n7.8	81	57.467	Oryzias_melastigma
ENSTGUG00000003878	SRBD1	100	73.887	ENSOGAG00000001076	SRBD1	84	73.887	Otolemur_garnettii
ENSTGUG00000003878	SRBD1	100	72.486	ENSOARG00000005958	SRBD1	84	72.486	Ovis_aries
ENSTGUG00000003878	SRBD1	100	76.867	ENSPPAG00000038442	SRBD1	83	76.867	Pan_paniscus
ENSTGUG00000003878	SRBD1	100	77.590	ENSPPRG00000003449	SRBD1	83	77.590	Panthera_pardus
ENSTGUG00000003878	SRBD1	100	77.711	ENSPTIG00000012495	SRBD1	83	77.711	Panthera_tigris_altaica
ENSTGUG00000003878	SRBD1	100	76.988	ENSPTRG00000011889	SRBD1	83	76.988	Pan_troglodytes
ENSTGUG00000003878	SRBD1	100	77.349	ENSPANG00000008063	SRBD1	84	77.349	Papio_anubis
ENSTGUG00000003878	SRBD1	100	61.058	ENSPKIG00000021973	si:ch211-117n7.8	85	61.058	Paramormyrops_kingsleyae
ENSTGUG00000003878	SRBD1	100	84.318	ENSPSIG00000008992	SRBD1	84	84.318	Pelodiscus_sinensis
ENSTGUG00000003878	SRBD1	99	56.486	ENSPMGG00000013348	si:ch211-117n7.8	86	56.486	Periophthalmus_magnuspinnatus
ENSTGUG00000003878	SRBD1	100	75.235	ENSPEMG00000020684	Srbd1	84	75.235	Peromyscus_maniculatus_bairdii
ENSTGUG00000003878	SRBD1	100	58.373	ENSPFOG00000010650	si:ch211-117n7.8	83	58.373	Poecilia_formosa
ENSTGUG00000003878	SRBD1	100	58.019	ENSPLAG00000002141	si:ch211-117n7.8	83	58.019	Poecilia_latipinna
ENSTGUG00000003878	SRBD1	100	58.491	ENSPMEG00000018537	si:ch211-117n7.8	83	58.491	Poecilia_mexicana
ENSTGUG00000003878	SRBD1	100	58.049	ENSPREG00000003258	si:ch211-117n7.8	85	58.049	Poecilia_reticulata
ENSTGUG00000003878	SRBD1	100	69.888	ENSPPYG00000012444	SRBD1	83	69.888	Pongo_abelii
ENSTGUG00000003878	SRBD1	91	70.955	ENSPCAG00000005629	SRBD1	80	70.955	Procavia_capensis
ENSTGUG00000003878	SRBD1	100	65.223	ENSPCOG00000017669	SRBD1	83	65.223	Propithecus_coquereli
ENSTGUG00000003878	SRBD1	100	68.465	ENSPVAG00000001782	SRBD1	84	68.465	Pteropus_vampyrus
ENSTGUG00000003878	SRBD1	100	55.900	ENSPNYG00000000508	si:ch211-117n7.8	85	56.086	Pundamilia_nyererei
ENSTGUG00000003878	SRBD1	100	61.962	ENSPNAG00000013492	SRBD1	84	62.081	Pygocentrus_nattereri
ENSTGUG00000003878	SRBD1	99	75.121	ENSRNOG00000014720	Srbd1	83	75.483	Rattus_norvegicus
ENSTGUG00000003878	SRBD1	100	76.988	ENSRBIG00000033486	SRBD1	84	76.988	Rhinopithecus_bieti
ENSTGUG00000003878	SRBD1	100	76.988	ENSRROG00000041599	SRBD1	84	76.988	Rhinopithecus_roxellana
ENSTGUG00000003878	SRBD1	100	76.988	ENSSBOG00000024982	SRBD1	84	76.988	Saimiri_boliviensis_boliviensis
ENSTGUG00000003878	SRBD1	100	61.091	ENSSFOG00015001128	si:ch211-117n7.8	90	61.091	Scleropages_formosus
ENSTGUG00000003878	SRBD1	100	57.311	ENSSMAG00000018256	si:ch211-117n7.8	82	57.294	Scophthalmus_maximus
ENSTGUG00000003878	SRBD1	100	57.412	ENSSLDG00000023189	si:ch211-117n7.8	83	57.412	Seriola_lalandi_dorsalis
ENSTGUG00000003878	SRBD1	99	71.342	ENSSARG00000009740	SRBD1	85	71.342	Sorex_araneus
ENSTGUG00000003878	SRBD1	99	79.782	ENSSPUG00000010475	SRBD1	92	79.782	Sphenodon_punctatus
ENSTGUG00000003878	SRBD1	100	55.778	ENSSPAG00000008092	-	84	55.778	Stegastes_partitus
ENSTGUG00000003878	SRBD1	100	78.580	ENSSSCG00000008445	SRBD1	80	81.374	Sus_scrofa
ENSTGUG00000003878	SRBD1	100	57.479	ENSTRUG00000007080	si:ch211-117n7.8	92	57.479	Takifugu_rubripes
ENSTGUG00000003878	SRBD1	100	56.302	ENSTNIG00000007464	si:ch211-117n7.8	83	56.302	Tetraodon_nigroviridis
ENSTGUG00000003878	SRBD1	79	95.745	ENSTBEG00000004556	SRBD1	67	95.745	Tupaia_belangeri
ENSTGUG00000003878	SRBD1	92	80.289	ENSTTRG00000011871	SRBD1	77	80.289	Tursiops_truncatus
ENSTGUG00000003878	SRBD1	100	77.617	ENSUAMG00000008126	SRBD1	97	71.377	Ursus_americanus
ENSTGUG00000003878	SRBD1	100	77.497	ENSUMAG00000012902	SRBD1	83	77.497	Ursus_maritimus
ENSTGUG00000003878	SRBD1	100	77.831	ENSVPAG00000006825	SRBD1	92	77.831	Vicugna_pacos
ENSTGUG00000003878	SRBD1	100	77.497	ENSVVUG00000005389	SRBD1	83	81.729	Vulpes_vulpes
ENSTGUG00000003878	SRBD1	99	57.883	ENSXETG00000002760	srbd1	84	58.161	Xenopus_tropicalis
ENSTGUG00000003878	SRBD1	100	58.373	ENSXMAG00000016861	si:ch211-117n7.8	83	58.373	Xiphophorus_maculatus